Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.4e-136 489.6 235 100.0
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 3.2e-101 372.1 207 82.1
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 2.1e-100 369.4 208 80.8
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 2.7e-100 369.0 208 81.2
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 1.9e-98 362.8 207 79.2
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 3.3e-98 362.1 208 80.3
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 4.0e-96 355.1 207 77.8
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 3.4e-95 352.1 207 78.3
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 4.4e-95 351.7 207 76.3
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 1.3e-94 350.1 207 76.8
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 2.2e-94 349.4 207 77.3
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.2e-94 349.4 210 75.2
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 2.9e-94 349.0 210 76.7
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 3.8e-94 348.6 208 74.0
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 3.8e-94 348.6 207 75.8
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 3.8e-94 348.6 207 75.4
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 3.8e-94 348.6 208 78.4
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.1e-93 347.1 210 75.2
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.4e-93 346.7 167 98.8
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 1.9e-93 346.3 208 75.5
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.9e-93 346.3 207 75.4
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 2.4e-93 345.9 208 76.9
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 4.2e-93 345.1 206 77.2
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 4.2e-93 345.1 204 77.5
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 5.4e-93 344.7 207 76.8
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 5.4e-93 344.7 207 76.8
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 7.1e-93 344.4 206 75.2
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 7.1e-93 344.4 210 73.3
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 9.3e-93 344.0 211 75.4
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 9.3e-93 344.0 205 77.1
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 1.2e-92 343.6 208 76.4
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 2.1e-92 342.8 211 74.9
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 2.7e-92 342.4 207 75.4
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.5e-92 342.0 208 76.0
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 4.6e-92 341.7 207 77.8
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 4.6e-92 341.7 210 76.2
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 1.0e-91 340.5 207 74.4
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 1.3e-91 340.1 207 74.9
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.7e-91 339.7 208 75.5
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.0e-91 339.0 207 74.9
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 3.0e-91 339.0 207 73.4
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 8.7e-91 337.4 208 73.1
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 8.7e-91 337.4 208 75.0
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 1.5e-90 336.7 207 74.4
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.5e-90 336.7 207 74.4
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 1.9e-90 336.3 211 73.9
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 1.9e-90 336.3 198 76.3
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 1.9e-90 336.3 204 74.5
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 2.5e-90 335.9 209 74.2
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 3.3e-90 335.5 211 73.9
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 3.3e-90 335.5 205 75.6
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 4.3e-90 335.1 207 73.9
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 4.3e-90 335.1 204 74.0
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 7.4e-90 334.3 209 74.6
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 9.6e-90 334.0 210 73.8
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 1.6e-89 333.2 210 73.8
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.1e-89 332.8 208 73.6
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 2.1e-89 332.8 204 75.5
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.8e-89 332.4 208 74.0
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 2.8e-89 332.4 210 72.4
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 2.8e-89 332.4 204 73.5
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 3.6e-89 332.0 198 76.3
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 1.4e-88 330.1 206 74.3
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 1.8e-88 329.7 202 73.3
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.8e-88 329.7 208 74.5
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 3.1e-88 328.9 210 73.8
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 4.0e-88 328.6 204 73.0
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 5.3e-88 328.2 206 71.8
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 6.9e-88 327.8 207 71.0
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.0e-88 327.4 207 72.5
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 5.8e-87 324.7 238 66.4
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 7.6e-87 324.3 208 71.6
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 2.2e-86 322.8 198 76.3
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 6.4e-86 321.2 204 71.1
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 8.4e-86 320.9 211 70.6
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 8.4e-86 320.9 201 73.6
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.1e-85 320.5 193 76.2
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 3.2e-85 318.9 204 71.6
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 3.2e-85 318.9 205 72.2
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 5.5e-85 318.2 204 71.6
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 5.5e-85 318.2 210 71.4
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 7.1e-85 317.8 204 70.6
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 7.1e-85 317.8 228 67.1
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 7.1e-85 317.8 190 75.3
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 7.1e-85 317.8 205 71.7
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 9.3e-85 317.4 198 70.2
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.2e-84 317.0 208 70.7
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 2.7e-84 315.8 204 70.6
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 3.5e-84 315.5 204 70.6
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 4.6e-84 315.1 204 70.6
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 4.6e-84 315.1 214 68.7
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 1.0e-83 313.9 208 71.6
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 1.8e-83 313.2 203 70.9
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 3.9e-83 312.0 207 68.6
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 8.7e-83 310.8 203 69.5
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 8.7e-83 310.8 202 70.3
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.1e-82 310.5 201 69.7
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 2.5e-82 309.3 234 67.1
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 3.3e-82 308.9 203 70.4
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 2.8e-81 305.8 206 68.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 6.2e-81 304.7 200 71.5
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 1.4e-80 303.5 204 67.6
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.1e-80 302.4 274 55.5
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 5.3e-80 301.6 204 67.6
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 9.0e-80 300.8 204 67.6
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 9.0e-80 300.8 204 67.6
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 1.5e-79 300.1 199 69.3
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 5.1e-75 285.0 215 65.1
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 6.7e-75 284.6 215 66.0
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.4e-72 276.9 352 44.3
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.1e-68 263.1 168 76.8
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 5.7e-66 255.0 167 70.7
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 7.4e-66 254.6 166 72.3
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 1.3e-65 253.8 167 65.3
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 3.7e-65 252.3 199 63.3
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.4e-64 250.4 177 67.2
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 1.0e-62 244.2 235 55.3
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 5.0e-62 241.9 199 60.3
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.9e-61 240.0 211 57.3
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 1.0e-59 234.2 132 76.5
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 1.1e-58 230.7 162 64.2
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.0e-58 229.9 218 54.1
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.8e-57 226.1 127 78.0
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.5e-55 220.3 136 74.3
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.6e-55 219.5 167 62.9
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 2.6e-55 219.5 123 77.2
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.1e-50 204.1 205 51.7
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 2.0e-50 203.4 149 65.8
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 1.2e-47 194.1 119 76.5
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 3.0e-43 179.5 127 60.6
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 5.3e-40 168.7 136 60.3
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 1.0e-38 164.5 120 65.0
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 8.8e-35 151.4 172 41.9
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 9.8e-34 147.9 86 77.9
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 4.8e-33 145.6 90 74.4
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.8e-25 119.8 133 51.1
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 3.4e-10 69.7 66 56.1
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.9e-08 63.9 32 78.1
ATR0598G211 Amborella trichopoda HOM05D005134 ORTHO05D067863 1.7e-06 57.4 60 50.0
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.7e-06 57.4 53 56.6


User provided reference genes

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