Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 1.7e-169 599.4 322 100.0
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 9.1e-83 311.2 221 70.6
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.6e-82 310.5 224 69.6
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 3.5e-82 309.3 224 72.3
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 4.5e-82 308.9 231 68.8
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 7.7e-82 308.1 219 70.8
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 3.8e-81 305.8 219 70.3
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 5.5e-80 302.0 219 69.9
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 9.4e-80 301.2 220 72.3
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 9.4e-80 301.2 222 68.5
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 1.6e-79 300.4 231 69.7
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 4.7e-79 298.9 222 68.9
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 4.7e-79 298.9 227 66.5
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 1.4e-78 297.4 208 72.1
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 1.8e-78 297.0 224 66.5
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 4.0e-78 295.8 225 66.7
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 4.0e-78 295.8 227 66.1
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 6.8e-78 295.0 226 65.5
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 6.8e-78 295.0 222 66.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 6.8e-78 295.0 220 66.4
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 1.5e-77 293.9 219 67.1
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 2.0e-77 293.5 222 67.1
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 2.6e-77 293.1 222 66.2
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 3.4e-77 292.7 225 65.8
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 7.5e-77 291.6 222 65.8
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 1.7e-76 290.4 221 66.1
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.7e-76 290.4 201 70.1
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 1.7e-76 290.4 223 66.8
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 2.8e-76 289.7 208 68.3
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 3.7e-76 289.3 228 65.4
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 4.9e-76 288.9 202 72.8
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 4.9e-76 288.9 180 76.7
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 6.3e-76 288.5 198 71.7
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 8.3e-76 288.1 205 69.3
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 1.1e-75 287.7 201 70.6
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 1.4e-75 287.3 177 80.2
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 1.8e-75 287.0 200 71.5
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.4e-75 286.6 223 66.4
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.1e-75 286.2 224 66.5
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 3.1e-75 286.2 201 70.1
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 5.4e-75 285.4 177 77.4
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 7.0e-75 285.0 222 65.3
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 1.6e-74 283.9 221 69.7
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 1.6e-74 283.9 204 68.6
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 3.5e-74 282.7 185 73.5
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 5.9e-74 282.0 189 73.5
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 5.9e-74 282.0 198 69.2
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 7.7e-74 281.6 189 72.0
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 7.7e-74 281.6 182 74.7
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 7.7e-74 281.6 194 71.1
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 1.0e-73 281.2 234 62.8
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 1.3e-73 280.8 221 66.5
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 1.3e-73 280.8 200 69.5
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 1.3e-73 280.8 184 74.5
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 1.7e-73 280.4 219 64.8
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.7e-73 280.4 185 73.5
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 2.3e-73 280.0 222 65.3
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 2.9e-73 279.6 205 70.2
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 2.9e-73 279.6 223 65.5
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 2.9e-73 279.6 178 74.2
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 3.8e-73 279.3 224 64.7
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 5.0e-73 278.9 219 66.2
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 1.9e-72 276.9 176 75.6
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 1.9e-72 276.9 224 63.4
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 2.5e-72 276.6 225 65.3
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 3.3e-72 276.2 172 76.7
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 9.5e-72 274.6 220 65.9
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 2.1e-71 273.5 224 63.8
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 2.8e-71 273.1 219 65.3
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 2.8e-71 273.1 220 65.5
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 2.8e-71 273.1 220 65.0
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 3.6e-71 272.7 225 63.1
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 6.1e-71 271.9 220 65.5
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 8.0e-71 271.6 201 67.7
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 1.0e-70 271.2 223 65.5
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 5.2e-70 268.9 220 65.0
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 6.8e-70 268.5 221 67.0
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 1.2e-69 267.7 167 77.8
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 9.8e-69 264.6 221 63.3
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 1.7e-68 263.8 184 68.5
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 3.7e-68 262.7 219 63.5
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.1e-67 261.2 180 67.8
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 1.4e-67 260.8 219 62.1
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 1.8e-67 260.4 177 71.8
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 2.4e-67 260.0 222 62.2
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 2.7e-66 256.5 160 76.9
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 3.5e-66 256.1 155 77.4
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 3.5e-66 256.1 178 67.4
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 1.0e-65 254.6 185 68.6
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 6.6e-65 251.9 154 79.2
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 1.9e-64 250.4 189 63.5
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 3.6e-63 246.1 190 66.3
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.4e-62 244.2 152 76.3
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 4.9e-60 235.7 177 68.4
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.2e-58 231.1 180 60.6
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 1.6e-58 230.7 225 56.4
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 3.5e-58 229.6 155 71.6
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 2.3e-57 226.9 169 63.9
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.5e-56 224.2 199 57.8
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 7.3e-56 221.9 223 56.1
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 4.7e-55 219.2 227 55.9
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 2.3e-54 216.9 252 49.6
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 3.1e-54 216.5 151 67.5
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 7.5e-53 211.8 173 65.3
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 2.4e-51 206.8 225 51.1
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 4.3e-48 196.1 143 71.3
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 3.6e-47 193.0 219 49.8
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 1.4e-46 191.0 172 59.9
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 4.0e-46 189.5 112 82.1
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 2.9e-44 183.3 193 47.7
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 1.2e-42 177.9 113 76.1
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 3.0e-41 173.3 112 74.1
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.4e-37 159.8 95 81.1
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 3.2e-35 153.3 139 57.6
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 2.7e-34 150.2 127 59.1
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.9e-32 144.1 95 70.5
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 2.8e-31 140.2 105 66.7
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 8.1e-31 138.7 173 46.2
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.4e-30 137.9 76 82.9
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 4.0e-30 136.3 83 74.7
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 9.0e-30 135.2 102 62.7
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 1.2e-26 124.8 112 57.1
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 3.5e-26 123.2 91 67.0
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 5.1e-25 119.4 143 51.7
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 5.1e-25 119.4 91 64.8
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 4.5e-21 106.3 70 70.0
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 1.0e-17 95.1 54 79.6
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 2.3e-17 94.0 70 61.4
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 1.1e-14 85.1 93 54.8
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 2.0e-13 80.9 75 53.3
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 2.1e-10 70.9 59 61.0


User provided reference genes

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