Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 2.8e-114 415.2 198 100.0
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 4.4e-88 328.2 199 78.4
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 5.8e-88 327.8 201 77.1
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 5.8e-88 327.8 201 77.1
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 9.9e-88 327.0 201 76.6
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.2e-87 325.9 198 76.8
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 4.9e-87 324.7 196 75.0
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 6.4e-87 324.3 199 75.4
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 1.1e-86 323.6 199 76.4
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 1.1e-86 323.6 201 75.6
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 1.9e-86 322.8 198 75.3
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 2.4e-86 322.4 199 76.4
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 5.4e-86 321.2 191 79.1
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 5.4e-86 321.2 191 79.1
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.6e-85 319.7 192 76.6
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 6.0e-85 317.8 192 76.6
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 7.8e-85 317.4 199 74.9
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 1.0e-84 317.0 192 76.0
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 1.0e-84 317.0 201 72.6
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.3e-84 316.6 200 76.0
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 2.3e-84 315.8 199 75.4
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 5.1e-84 314.7 200 73.5
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 6.6e-84 314.3 198 73.2
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 1.1e-83 313.5 190 76.8
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.1e-83 313.5 219 70.3
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 7.3e-83 310.8 200 74.5
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 7.3e-83 310.8 200 74.5
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.3e-82 310.1 193 74.1
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 1.3e-82 310.1 199 74.4
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 2.8e-82 308.9 196 72.4
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 8.1e-82 307.4 199 73.9
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 2.0e-80 302.8 196 69.4
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 5.8e-80 301.2 196 71.4
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 9.9e-80 300.4 201 69.7
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.3e-79 300.1 192 72.9
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 1.3e-79 300.1 200 71.5
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.3e-79 300.1 194 71.6
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 2.2e-79 299.3 200 70.0
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 8.4e-79 297.4 197 73.1
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 8.4e-79 297.4 201 68.2
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 8.4e-79 297.4 192 72.4
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 1.1e-78 297.0 194 72.2
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 3.2e-78 295.4 194 72.2
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 9.3e-78 293.9 194 71.1
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 1.2e-77 293.5 194 71.6
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 2.1e-77 292.7 194 71.1
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 3.5e-77 292.0 192 70.3
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 6.0e-77 291.2 192 70.8
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.7e-76 289.7 169 78.7
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.7e-76 289.7 194 70.1
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 1.7e-76 289.7 194 68.6
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 2.3e-76 289.3 199 66.8
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 2.3e-76 289.3 194 71.1
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 3.0e-76 288.9 192 72.4
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 6.6e-76 287.7 199 66.8
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 6.6e-76 287.7 199 67.8
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 8.7e-76 287.3 199 66.8
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 8.7e-76 287.3 200 67.5
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 1.9e-75 286.2 192 69.3
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 2.8e-74 282.3 199 65.3
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 2.8e-74 282.3 199 65.3
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 2.8e-74 282.3 201 69.7
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 4.8e-74 281.6 199 65.8
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.8e-73 279.6 199 68.8
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 2.4e-73 279.3 166 78.3
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 6.9e-73 277.7 192 66.7
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 1.2e-72 276.9 191 68.6
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 1.2e-72 276.9 193 68.9
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 2.6e-72 275.8 199 64.8
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 3.4e-72 275.4 166 78.3
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 3.4e-72 275.4 185 69.2
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 4.5e-72 275.0 179 70.9
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 7.6e-72 274.2 196 66.8
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 1.3e-71 273.5 199 64.3
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 1.3e-71 273.5 195 66.2
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 2.2e-71 272.7 156 80.1
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 6.4e-71 271.2 198 63.1
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 3.2e-70 268.9 192 64.1
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 5.5e-70 268.1 169 70.4
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 6.7e-68 261.2 199 61.8
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 8.7e-68 260.8 202 62.9
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 1.1e-67 260.4 193 65.3
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 2.5e-67 259.2 198 58.1
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 4.8e-66 255.0 167 68.9
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 4.8e-66 255.0 197 60.4
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 9.0e-65 250.8 192 62.0
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 1.5e-64 250.0 188 63.3
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 3.4e-64 248.8 159 72.3
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 5.8e-64 248.1 166 71.7
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 1.7e-63 246.5 198 62.6
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 4.9e-63 245.0 166 71.7
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 2.5e-62 242.7 200 60.5
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 2.5e-62 242.7 192 63.0
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.6e-58 229.9 133 78.9
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.6e-58 229.9 133 78.9
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 1.1e-57 227.3 221 53.4
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.9e-55 219.2 199 51.8
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 1.6e-53 213.4 132 68.9
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 1.8e-52 209.9 200 50.0
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 5.1e-52 208.4 173 59.5
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 9.7e-51 204.1 192 54.7
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 2.4e-49 199.5 192 47.9
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 5.3e-49 198.4 195 47.7
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 6.5e-47 191.4 193 50.8
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 3.1e-41 172.6 102 72.5
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 5.0e-39 165.2 92 82.6
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.1e-35 154.1 273 38.1
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 3.7e-34 149.1 81 82.7
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 2.4e-33 146.4 217 38.7
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 9.4e-30 134.4 92 64.1
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 1.1e-27 127.5 111 54.1
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.2e-24 117.5 184 36.4
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 6.5e-23 111.7 77 70.1
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 8.5e-23 111.3 70 70.0
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 5.9e-16 88.6 229 31.0
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 5.0e-15 85.5 135 34.1
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 1.0e-12 77.8 75 49.3
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 8.8e-12 74.7 62 58.1
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 3.4e-11 72.8 53 62.3
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 3.4e-11 72.8 57 56.1
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 1.3e-10 70.9 47 76.6


User provided reference genes

Program Settings