Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.1e-112 409.8 186 100.0
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.1e-95 352.4 185 87.6
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.6e-95 351.3 185 87.6
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 9.3e-72 273.9 190 66.8
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.0e-65 253.8 188 61.7
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 1.4e-64 250.0 192 60.4
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 4.2e-64 248.4 190 60.5
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 6.7e-62 241.1 188 59.6
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 6.7e-62 241.1 190 57.9
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 3.3e-61 238.8 191 59.7
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 3.7e-60 235.3 188 59.0
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 3.7e-60 235.3 192 56.8
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.1e-59 233.8 188 57.4
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 4.1e-59 231.9 187 55.6
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 4.1e-59 231.9 187 55.6
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 9.1e-59 230.7 188 59.6
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 9.1e-59 230.7 188 59.0
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 9.1e-59 230.7 192 57.3
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 1.5e-58 229.9 188 58.5
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.5e-58 229.9 191 56.0
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 2.0e-58 229.6 188 57.4
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 3.4e-58 228.8 160 65.0
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 3.4e-58 228.8 190 56.3
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 4.5e-58 228.4 219 50.7
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 5.9e-58 228.0 188 55.9
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.0e-57 227.3 192 56.2
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.0e-57 227.3 188 58.0
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.0e-57 227.3 188 56.9
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.3e-57 226.9 187 56.7
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.3e-57 226.9 189 57.7
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 1.7e-57 226.5 199 54.3
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.2e-57 226.1 199 54.3
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 2.9e-57 225.7 187 56.7
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 3.8e-57 225.3 192 53.1
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 3.8e-57 225.3 193 58.5
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 3.8e-57 225.3 187 56.1
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.8e-57 225.3 187 56.1
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.8e-57 225.3 187 56.1
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 3.8e-57 225.3 190 56.3
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.0e-57 224.9 187 55.6
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 6.5e-57 224.6 192 56.2
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 8.5e-57 224.2 190 55.3
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 8.5e-57 224.2 187 55.6
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.4e-56 223.4 188 56.9
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.4e-56 223.4 188 56.9
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 1.9e-56 223.0 187 56.1
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.5e-56 222.6 191 54.5
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.2e-56 222.2 187 55.1
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 3.2e-56 222.2 188 55.9
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 4.2e-56 221.9 187 55.1
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 7.2e-56 221.1 191 51.3
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 7.2e-56 221.1 187 54.0
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 9.4e-56 220.7 190 54.2
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 3.6e-55 218.8 172 56.4
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 1.8e-54 216.5 172 57.6
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 2.3e-54 216.1 172 54.7
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 3.0e-54 215.7 191 52.4
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.1e-53 213.8 172 55.2
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 3.3e-53 212.2 172 55.8
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 3.3e-53 212.2 188 55.9
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.4e-53 211.8 173 54.9
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.3e-52 210.3 171 56.1
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 2.2e-52 209.5 172 54.7
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 4.8e-52 208.4 161 59.6
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.4e-51 206.8 172 54.7
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.8e-51 206.5 162 60.5
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 2.4e-51 206.1 175 54.9
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.1e-51 205.7 188 50.5
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 4.1e-51 205.3 161 57.8
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 5.3e-51 204.9 159 60.4
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 2.0e-50 203.0 195 48.7
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 4.5e-50 201.8 156 59.6
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 7.7e-50 201.1 160 55.0
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 1.3e-49 200.3 165 55.8
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.3e-49 200.3 89 98.9
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.7e-49 199.9 157 59.2
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 1.7e-49 199.9 158 58.9
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 2.9e-49 199.1 182 54.4
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 5.0e-49 198.4 163 55.8
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 5.0e-49 198.4 155 60.0
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.2e-47 193.7 164 54.3
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.0e-46 190.7 206 47.6
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.3e-46 189.5 197 47.2
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 3.9e-46 188.7 165 53.3
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 3.9e-46 188.7 173 54.3
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 5.2e-46 188.3 155 56.8
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 3.3e-45 185.7 168 53.0
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 3.3e-45 185.7 165 52.7
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 5.7e-45 184.9 186 48.9
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 5.7e-45 184.9 184 50.5
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 8.2e-44 181.0 150 58.0
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 7.7e-42 174.5 177 50.3
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 2.9e-41 172.6 164 51.2
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 8.5e-41 171.0 162 51.2
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 8.8e-38 161.0 157 51.0
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.2e-37 160.6 128 56.2
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 2.0e-37 159.8 226 38.9
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 2.6e-37 159.5 138 58.0
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.3e-36 157.1 77 94.8
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.8e-33 145.6 181 43.1
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 1.1e-32 144.1 197 40.1
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 2.5e-32 142.9 173 41.6
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.3e-28 130.6 142 45.1
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 1.3e-28 130.6 102 57.8
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 3.7e-28 129.0 100 59.0
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 5.4e-27 125.2 167 37.1
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 7.0e-27 124.8 141 43.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 2.7e-26 122.9 130 48.5
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 2.7e-26 122.9 164 38.4
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 2.9e-25 119.4 120 45.8
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.1e-23 113.2 167 37.7
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 2.0e-21 106.7 138 42.8
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 5.7e-21 105.1 105 46.7
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.8e-20 102.8 168 35.7
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 5.4e-19 98.6 143 39.2
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 1.2e-18 97.4 159 35.8
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 2.7e-18 96.3 64 62.5
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 5.9e-18 95.1 171 35.7
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 3.9e-17 92.4 64 62.5
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 5.0e-17 92.0 64 59.4
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 5.0e-17 92.0 201 26.9
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 5.0e-17 92.0 61 67.2
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 5.0e-17 92.0 64 59.4
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.2e-15 87.4 193 26.9
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 1.2e-15 87.4 173 32.4
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 3.6e-15 85.9 63 60.3
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 4.7e-15 85.5 63 57.1
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 1.4e-14 84.0 51 60.8
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 8.9e-14 81.3 61 60.7
Zm00001eb119810 Zea mays HOM05D000590 ORTHO05D006825 2.9e-12 76.3 78 46.2
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 2.0e-10 70.1 59 54.2
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 6.0e-10 68.6 149 33.6
PSO210G5020 Papaver somniferum HOM05D001459 ORTHO05D003498 1.7e-09 67.0 52 59.6
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 9.5e-08 61.2 52 50.0


User provided reference genes

Program Settings