Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.0e-149 533.5 292 100.0
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 1.4e-50 204.1 306 48.4
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 1.8e-45 187.2 294 44.6
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 7.1e-42 175.3 316 44.0
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 2.1e-41 173.7 310 42.3
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 5.1e-40 169.1 320 41.6
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 1.3e-38 164.5 307 44.3
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 4.8e-38 162.5 324 42.9
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 6.2e-38 162.2 302 41.4
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 4.0e-37 159.5 308 39.9
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 1.2e-36 157.9 297 38.4
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 5.8e-36 155.6 240 41.7
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 7.6e-36 155.2 319 37.9
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 1.3e-35 154.5 296 41.6
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 2.2e-35 153.7 318 38.7
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 7.1e-34 148.7 301 42.2
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 9.3e-34 148.3 248 39.5
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 1.3e-32 144.4 308 40.3
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 1.3e-32 144.4 309 38.2
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.3e-32 144.4 301 38.5
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 3.0e-32 143.3 331 39.3
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.0e-32 143.3 324 39.8
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 5.1e-32 142.5 295 36.9
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 3.3e-31 139.8 327 34.6
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 4.3e-31 139.4 306 38.2
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 5.6e-31 139.0 256 37.5
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 2.1e-30 137.1 241 40.2
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 1.1e-29 134.8 309 38.2
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 6.9e-29 132.1 301 34.6
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 3.4e-28 129.8 328 38.4
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 7.6e-28 128.6 323 34.4
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 2.2e-27 127.1 312 33.0
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 2.9e-27 126.7 294 32.0
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.9e-27 126.7 284 39.8
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.4e-27 125.6 317 31.9
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 1.4e-26 124.4 338 33.7
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 2.4e-26 123.6 304 36.2
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.1e-26 122.1 317 31.2
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 9.3e-26 121.7 301 35.5
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.3e-26 121.7 320 30.6
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 9.3e-26 121.7 313 32.6
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.7e-25 120.2 230 34.8
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 2.7e-25 120.2 316 31.0
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 3.5e-25 119.8 230 34.8
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 4.6e-25 119.4 244 38.5
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 4.6e-25 119.4 280 35.7
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.0e-24 118.2 313 30.0
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 1.0e-24 118.2 323 37.5
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 3.9e-24 116.3 321 37.1
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 5.1e-24 115.9 307 33.6
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 1.5e-23 114.4 307 40.7
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 2.5e-23 113.6 344 33.1
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 3.3e-23 113.2 299 36.5
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 4.3e-23 112.8 312 37.5
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 7.4e-23 112.1 321 37.4
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 7.4e-23 112.1 285 34.0
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 4.8e-22 109.4 319 33.5
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 6.2e-22 109.0 201 37.8
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 8.2e-22 108.6 320 33.8
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 4.0e-21 106.3 348 31.6
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 6.9e-21 105.5 298 37.6
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 6.9e-21 105.5 327 32.4
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 2.0e-20 104.0 326 31.3
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 2.0e-20 104.0 308 35.4
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 2.0e-20 104.0 303 38.9
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 2.6e-20 103.6 309 34.6
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 3.4e-20 103.2 310 38.1
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 4.5e-20 102.8 242 33.1
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 7.6e-20 102.1 310 34.2
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.3e-19 101.3 268 31.3
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 1.3e-19 101.3 187 33.7
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 6.5e-19 99.0 321 29.9
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 6.5e-19 99.0 333 35.4
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 1.1e-18 98.2 311 36.0
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 1.1e-18 98.2 300 37.3
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.4e-18 97.8 300 38.3
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.1e-18 95.5 324 29.6
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 2.1e-17 94.0 276 34.8
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.7e-17 93.6 309 28.5
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 3.5e-17 93.2 298 35.9
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.6e-17 92.8 322 29.5
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.6e-17 92.8 331 31.1
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.3e-16 91.3 298 32.9
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-16 90.9 295 30.5
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 2.3e-16 90.5 344 36.0
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.1e-15 88.2 310 29.4
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 3.3e-15 86.7 302 34.8
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 4.3e-15 86.3 351 27.6
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 4.3e-15 86.3 224 31.7
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 7.4e-15 85.5 192 33.3
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.7e-15 85.1 359 28.7
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 1.6e-14 84.3 308 36.4
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 2.8e-14 83.6 296 31.4
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 4.8e-14 82.8 174 45.4
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 1.5e-12 77.8 351 27.6
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 4.5e-12 76.3 213 29.1
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 5.9e-12 75.9 121 35.5
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 7.6e-12 75.5 301 34.2
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.9e-11 73.6 213 28.2
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 2.9e-11 73.6 307 34.2
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.8e-11 73.2 213 28.2
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 1.1e-10 71.6 315 35.2
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 1.4e-10 71.2 308 32.5
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 2.5e-10 70.5 340 26.8
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.5e-10 70.5 213 27.7
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 2.5e-10 70.5 346 28.0
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 4.2e-10 69.7 206 29.6
THA.LOC104801575 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 9.3e-10 68.6 111 39.6
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 1.2e-09 68.2 321 27.7
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 1.6e-09 67.8 117 36.8
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 1.6e-09 67.8 298 28.9
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 1.6e-09 67.8 218 28.0
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 4.6e-09 66.2 198 32.3
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 6.1e-09 65.9 140 36.4
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 7.9e-09 65.5 303 30.7
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.3e-08 63.9 78 43.6
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 3.0e-08 63.5 299 33.8
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 1.1e-07 61.6 346 28.3
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 1.5e-07 61.2 256 28.1
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 3.3e-07 60.1 347 24.2
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 4.3e-07 59.7 188 27.1
Zm00001eb222450 Zea mays HOM05D024295 ORTHO05D020951 9.7e-07 58.5 243 29.2
PSO782G0031 Papaver somniferum HOM05D020029 ORTHO05D005694 1.3e-06 58.2 323 26.6
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.2e-06 57.4 213 31.5
Gorai.004G159200 Gossypium raimondii HOM05D006343 ORTHO05D005694 2.2e-06 57.4 292 32.5
Solyc03g095830.3 Solanum lycopersicum HOM05D064734 ORTHO05D005694 2.2e-06 57.4 247 27.5
BcaC04g24184 Brassica carinata HOM05D012121 ORTHO05D005694 3.7e-06 56.6 344 25.3
BolC9t52962H Brassica oleracea HOM05D012121 ORTHO05D005694 3.7e-06 56.6 344 25.3
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 4.8e-06 56.2 339 26.0
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 4.8e-06 56.2 346 25.4


User provided reference genes

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