Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 0.0e+00 1335.5 647 100.0
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 1.9e-297 1025.4 650 76.9
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.4e-295 1019.2 647 75.1
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 5.2e-295 1017.3 651 76.5
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 7.5e-294 1013.4 646 75.5
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 2.8e-293 1011.5 653 75.7
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.9e-293 1010.7 652 75.5
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 2.4e-292 1008.4 645 76.3
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 4.1e-292 1007.7 651 75.3
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 2.9e-290 1001.5 650 74.2
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 7.3e-289 996.9 640 74.5
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 3.6e-288 994.6 651 74.7
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 8.9e-287 989.9 679 72.3
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 1.5e-286 989.2 638 75.7
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 3.4e-286 988.0 651 73.1
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.4e-286 987.6 689 70.8
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 4.4e-286 987.6 651 73.3
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 3.7e-285 984.6 653 74.4
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 1.4e-284 982.6 648 73.3
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 4.1e-284 981.1 651 73.0
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 2.0e-283 978.8 653 73.4
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 6.0e-283 977.2 648 73.3
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.3e-281 970.3 671 71.5
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 6.2e-280 967.2 654 72.2
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 1.1e-279 966.5 649 72.3
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.8e-279 965.7 671 71.2
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 8.3e-277 956.8 646 72.4
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 9.2e-276 953.4 607 74.6
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 2.1e-272 942.2 647 69.1
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 2.1e-272 942.2 635 73.2
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 7.5e-270 933.7 652 69.0
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 2.4e-268 928.7 643 71.1
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 4.1e-268 927.9 662 69.6
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.0e-266 923.3 638 70.1
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.0e-266 923.3 642 70.6
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 7.3e-265 917.1 645 69.0
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 9.5e-265 916.8 672 66.8
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 2.1e-264 915.6 642 68.8
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 4.7e-264 914.4 649 69.2
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 4.7e-264 914.4 649 69.0
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 1.4e-263 912.9 643 69.5
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 1.8e-263 912.5 642 67.9
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 3.1e-263 911.8 652 68.1
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 4.0e-263 911.4 651 69.7
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 5.2e-263 911.0 644 69.3
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 8.9e-263 910.2 651 68.0
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 4.4e-262 907.9 643 69.2
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 4.9e-261 904.4 643 68.0
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 4.9e-261 904.4 641 69.1
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 8.4e-261 903.7 643 68.9
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 2.4e-260 902.1 642 69.6
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 5.4e-260 901.0 640 70.2
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 1.6e-259 899.4 650 69.2
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 1.6e-259 899.4 643 68.0
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 2.1e-259 899.0 643 68.4
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 2.1e-259 899.0 637 69.2
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 3.5e-259 898.3 649 69.5
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 1.7e-258 896.0 644 68.6
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 6.6e-258 894.0 647 67.2
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 1.9e-257 892.5 668 66.8
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 2.5e-257 892.1 639 67.3
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 6.2e-256 887.5 665 66.2
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 1.8e-255 885.9 648 68.1
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.8e-255 885.9 637 68.8
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 2.4e-255 885.6 637 68.8
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 2.4e-255 885.6 647 67.5
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 5.2e-255 884.4 648 66.8
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 6.9e-255 884.0 645 66.4
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 2.0e-254 882.5 652 65.6
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 4.4e-254 881.3 634 68.0
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 5.8e-254 880.9 650 66.2
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 2.9e-253 878.6 648 66.4
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 8.4e-253 877.1 640 67.0
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 3.2e-252 875.2 638 66.9
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 4.2e-252 874.8 649 67.2
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 9.3e-252 873.6 642 65.4
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 2.1e-251 872.5 589 71.5
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 4.6e-251 871.3 630 67.6
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 5.1e-250 867.8 655 64.9
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 5.1e-250 867.8 655 64.9
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 7.3e-249 864.0 685 63.6
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 9.6e-241 837.0 645 63.3
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 3.3e-233 812.0 644 62.7
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 3.5e-227 792.0 648 61.1
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 3.3e-225 785.4 499 75.4
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 2.2e-224 782.7 460 81.1
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 8.2e-224 780.8 641 59.9
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 3.4e-222 775.4 646 61.3
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 1.5e-209 733.4 602 60.5
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 4.8e-208 728.4 554 64.8
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 1.3e-197 693.7 646 56.3
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 1.6e-190 670.2 620 54.4
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 7.5e-185 651.4 627 52.8
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 9.1e-183 644.4 621 54.8
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 8.3e-176 621.3 504 60.7
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 4.0e-170 602.4 362 77.6
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 1.7e-165 587.0 432 66.7
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 1.2e-155 554.3 334 78.7
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 3.2e-151 539.7 335 76.7
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 3.0e-133 479.9 472 51.5
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.9e-119 434.1 419 57.0
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 2.0e-84 317.8 194 78.4
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 5.9e-81 306.2 267 57.3
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 1.0e-69 268.9 175 68.0
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 1.9e-63 248.1 156 77.6
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 3.6e-62 243.8 205 60.5
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 4.6e-57 226.9 181 64.6
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 2.8e-54 217.6 178 61.8
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 3.7e-51 207.2 190 53.2
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 6.4e-51 206.5 127 77.2
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 1.3e-43 182.2 174 54.6
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 8.4e-35 152.9 107 67.3
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 7.3e-31 139.8 73 83.6
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 1.5e-28 132.1 115 58.3
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 2.5e-23 114.8 77 66.2
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 4.3e-23 114.0 63 84.1


User provided reference genes

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