Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.2e-103 379.8 192 100.0
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 7.8e-90 334.0 193 85.0
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 2.4e-86 322.4 191 83.2
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 2.4e-86 322.4 192 82.3
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 2.0e-85 319.3 193 80.8
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 4.5e-85 318.2 193 81.9
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 5.8e-85 317.8 192 82.3
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 9.9e-85 317.0 193 81.9
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 1.3e-84 316.6 193 80.3
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.7e-84 316.2 213 75.1
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 6.4e-84 314.3 192 80.7
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 6.4e-84 314.3 193 80.8
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.4e-83 313.2 193 81.3
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 4.2e-83 311.6 193 79.8
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 7.1e-83 310.8 184 83.7
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.1e-82 309.3 185 81.6
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.1e-82 309.3 191 79.6
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 2.7e-82 308.9 193 80.3
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 2.7e-82 308.9 192 77.6
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 7.9e-82 307.4 193 78.2
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.8e-81 306.2 193 80.3
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 2.3e-81 305.8 192 78.1
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.3e-81 305.8 191 79.6
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 3.0e-81 305.4 235 68.5
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 3.0e-81 305.4 192 78.1
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 6.7e-81 304.3 190 80.5
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 8.7e-81 303.9 193 77.7
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 1.9e-80 302.8 193 79.3
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 7.4e-80 300.8 191 75.4
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.1e-79 299.3 191 75.9
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 3.7e-79 298.5 193 75.6
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 3.7e-79 298.5 193 79.8
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 6.2e-79 297.7 185 80.0
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 8.1e-79 297.4 193 78.8
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 8.1e-79 297.4 191 76.4
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.1e-78 297.0 194 75.8
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.1e-78 297.0 193 79.3
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 1.4e-78 296.6 191 78.0
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 2.4e-78 295.8 193 76.7
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 2.4e-78 295.8 193 78.2
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 3.1e-78 295.4 185 77.8
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.2e-77 293.5 191 75.4
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 2.6e-77 292.4 189 74.6
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 9.9e-77 290.4 191 73.8
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 1.3e-76 290.0 193 72.5
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.3e-76 290.0 190 73.7
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 3.8e-76 288.5 185 76.2
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 6.4e-76 287.7 191 71.2
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 4.6e-74 281.6 177 78.5
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 6.0e-74 281.2 185 71.4
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 6.0e-74 281.2 177 81.4
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.0e-73 280.4 191 69.1
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 1.0e-73 280.4 186 76.3
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 1.3e-73 280.0 185 74.6
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.8e-73 279.6 190 73.7
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.8e-73 279.6 185 71.4
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 3.0e-73 278.9 193 70.5
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 1.5e-72 276.6 193 70.5
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 1.5e-72 276.6 191 70.2
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.9e-72 276.2 190 70.0
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 4.3e-72 275.0 188 70.2
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 4.3e-72 275.0 191 69.6
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 1.3e-71 273.5 189 67.2
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 3.7e-71 271.9 193 69.9
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 1.8e-70 269.6 169 78.1
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 1.8e-70 269.6 188 67.0
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 2.4e-70 269.2 176 74.4
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.0e-68 263.8 230 63.0
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 4.9e-68 261.5 154 83.1
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 7.1e-67 257.7 164 78.7
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 7.1e-67 257.7 164 78.7
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 8.7e-65 250.8 153 81.0
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.9e-64 249.6 170 71.8
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 5.7e-64 248.1 160 78.8
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.3e-63 246.9 169 69.8
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 1.8e-62 243.0 209 60.8
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 1.2e-61 240.4 154 74.7
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 1.8e-57 226.5 138 81.9
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 3.0e-57 225.7 138 81.9
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 1.0e-52 210.7 207 58.0
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 2.7e-50 202.6 129 76.0
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 3.9e-49 198.7 120 78.3
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.1e-48 197.2 130 72.3
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 7.4e-48 194.5 153 69.3
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.5e-43 178.3 115 79.1
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 3.0e-41 172.6 208 50.0
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.2e-37 160.6 103 76.7
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 9.4e-35 151.0 133 57.1
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 4.7e-34 148.7 133 61.7
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 2.3e-33 146.4 90 81.1
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 4.4e-32 142.1 188 45.7
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 2.4e-30 136.3 79 81.0
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.0e-28 131.0 76 85.5
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 8.5e-28 127.9 139 53.2
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 5.5e-27 125.2 76 80.3
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 5.5e-27 125.2 70 84.3
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 8.3e-23 111.3 190 37.9
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 7.0e-22 108.2 182 36.3
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 4.5e-21 105.5 182 35.2
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 4.5e-21 105.5 130 40.0
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 2.3e-20 103.2 60 83.3
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 6.6e-20 101.7 182 34.6
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 1.5e-16 90.5 168 36.9
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 2.6e-16 89.7 170 37.1
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 5.7e-16 88.6 130 43.8
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 3.7e-15 85.9 73 60.3
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 4.9e-15 85.5 56 71.4
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 8.3e-15 84.7 60 68.3
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 2.0e-08 63.5 61 50.8
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 1.7e-07 60.5 53 56.6
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 2.9e-07 59.7 33 81.8
Lsat_1_v5_gn_3_12301 Lactuca sativa HOM05D035019 ORTHO05D008519 7.0e-06 55.1 33 72.7
Lsat_1_v5_gn_8_143201 Lactuca sativa HOM05D035019 ORTHO05D008519 7.0e-06 55.1 33 72.7


User provided reference genes

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