Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 3.5e-116 421.8 232 100.0
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.9e-78 295.0 169 85.8
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 1.4e-77 293.5 167 86.2
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 9.2e-77 290.8 167 83.8
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 2.7e-76 289.3 168 84.5
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 3.5e-76 288.9 170 85.3
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.3e-75 287.0 170 84.1
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 1.3e-75 287.0 167 82.6
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 1.3e-75 287.0 167 82.6
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 1.7e-75 286.6 167 82.0
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.0e-75 285.8 167 83.8
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.0e-75 285.8 167 83.8
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.0e-75 285.8 167 83.8
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 3.0e-75 285.8 170 82.9
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 3.9e-75 285.4 167 81.4
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 5.0e-75 285.0 167 82.6
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 5.0e-75 285.0 169 82.2
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 5.0e-75 285.0 169 85.2
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 6.6e-75 284.6 169 83.4
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 3.3e-74 282.3 167 83.2
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 3.3e-74 282.3 169 82.8
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 4.3e-74 282.0 171 81.9
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.3e-74 282.0 167 84.4
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 7.3e-74 281.2 171 81.3
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.3e-74 281.2 171 81.3
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.3e-74 281.2 171 81.3
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 7.3e-74 281.2 170 81.8
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.6e-73 280.0 168 81.0
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.8e-73 279.3 172 82.6
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 2.8e-73 279.3 173 79.8
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.6e-73 278.9 171 80.7
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 3.6e-73 278.9 169 81.7
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.6e-73 278.9 171 80.7
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 4.7e-73 278.5 170 81.2
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 6.2e-73 278.1 171 80.7
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 8.1e-73 277.7 167 79.6
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 8.1e-73 277.7 171 80.1
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 8.1e-73 277.7 174 78.7
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 2.3e-72 276.2 172 80.2
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 2.3e-72 276.2 169 79.9
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 8.9e-72 274.2 168 81.0
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.2e-71 273.9 172 79.1
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 2.6e-71 272.7 169 78.7
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 5.8e-71 271.6 166 81.3
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 7.5e-71 271.2 169 78.1
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 9.9e-71 270.8 170 77.1
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.3e-70 270.4 168 79.8
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.7e-70 270.0 173 77.5
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.2e-70 269.6 168 79.2
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.2e-70 269.6 168 79.2
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 2.2e-70 269.6 168 79.2
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 2.9e-70 269.2 168 77.4
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 3.7e-70 268.9 168 79.2
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 3.7e-70 268.9 174 79.3
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 3.7e-70 268.9 174 77.6
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 8.3e-70 267.7 169 78.1
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 1.4e-69 266.9 172 76.2
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.4e-69 266.9 168 79.2
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 2.4e-69 266.2 168 78.0
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 4.1e-69 265.4 168 78.6
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 5.4e-69 265.0 182 75.8
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 9.2e-69 264.2 168 77.4
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 2.1e-68 263.1 168 78.6
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 2.1e-68 263.1 173 75.1
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 2.1e-68 263.1 173 75.1
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 3.5e-68 262.3 167 77.2
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.7e-67 260.0 175 74.9
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 3.9e-67 258.8 168 78.0
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 5.1e-67 258.5 182 72.0
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 8.6e-67 257.7 222 66.2
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 4.3e-66 255.4 176 71.0
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 4.3e-66 255.4 176 71.0
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.6e-65 253.4 167 74.9
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 3.6e-65 252.3 167 71.9
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 4.7e-65 251.9 169 75.7
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 6.8e-64 248.1 165 72.7
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 4.4e-63 245.4 178 71.9
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 4.4e-63 245.4 175 70.9
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 7.6e-63 244.6 172 72.1
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 9.9e-63 244.2 175 70.3
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 9.9e-63 244.2 175 70.3
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.7e-62 243.4 178 70.2
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.7e-62 243.4 178 70.2
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.7e-62 243.4 178 70.2
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.7e-62 243.4 178 70.2
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 4.9e-62 241.9 179 68.7
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 8.4e-62 241.1 182 68.1
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.1e-61 240.7 181 68.0
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.1e-61 240.7 181 68.0
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.4e-61 240.4 167 68.9
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 1.4e-61 240.4 182 68.1
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.2e-61 237.7 166 72.9
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 8.7e-59 231.1 144 80.6
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 7.3e-58 228.0 139 79.9
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 6.2e-57 224.9 181 66.3
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 6.2e-57 224.9 168 68.5
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 4.4e-55 218.8 142 74.6
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.6e-52 210.3 134 77.6
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 2.6e-47 193.0 143 67.1
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 3.4e-47 192.6 168 61.9
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.7e-46 190.3 165 56.4
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 4.3e-42 175.6 106 78.3
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 9.6e-42 174.5 164 53.7
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 8.1e-41 171.4 106 76.4
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.8e-40 170.2 165 51.5
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 6.9e-40 168.3 167 50.3
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.0e-39 166.8 99 80.8
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.2e-37 159.5 167 53.9
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.7e-30 137.1 120 57.5
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.5e-30 135.2 164 50.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.3e-25 120.9 131 54.2
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 3.3e-18 96.3 66 69.7
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.7e-15 85.1 63 73.0
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.8e-11 73.9 46 76.1
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.0e-06 55.8 33 75.8


User provided reference genes

Program Settings