Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 3.1e-66 255.0 128 100.0
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 5.8e-57 224.2 166 71.1
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.1e-55 219.9 173 68.2
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.6e-54 216.1 173 66.5
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 3.5e-54 214.9 173 66.5
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 7.9e-54 213.8 173 67.1
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 7.9e-54 213.8 173 67.1
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 1.0e-53 213.4 115 88.7
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 2.3e-53 212.2 113 92.0
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 2.3e-53 212.2 174 66.1
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 3.0e-53 211.8 172 68.0
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 3.0e-53 211.8 172 68.0
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 3.9e-53 211.5 168 66.7
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 5.1e-53 211.1 171 65.5
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 5.1e-53 211.1 167 66.5
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 6.7e-53 210.7 172 66.3
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 6.7e-53 210.7 113 90.3
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 6.7e-53 210.7 129 79.1
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 6.7e-53 210.7 173 65.3
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 8.7e-53 210.3 115 89.6
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 8.7e-53 210.3 113 88.5
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 1.1e-52 209.9 173 64.7
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 1.5e-52 209.5 115 88.7
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 1.5e-52 209.5 172 65.7
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 1.9e-52 209.1 168 65.5
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 1.9e-52 209.1 176 64.8
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.9e-52 209.1 113 89.4
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.5e-52 208.8 175 65.1
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 3.3e-52 208.4 167 65.9
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 3.3e-52 208.4 169 65.1
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.3e-52 208.4 175 65.1
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 4.3e-52 208.0 171 65.5
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 4.3e-52 208.0 167 64.7
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 4.3e-52 208.0 167 64.7
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 5.7e-52 207.6 115 87.8
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 7.4e-52 207.2 115 89.6
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 9.6e-52 206.8 177 64.4
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 9.6e-52 206.8 172 64.5
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 9.6e-52 206.8 173 65.3
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 1.3e-51 206.5 113 86.7
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 1.6e-51 206.1 113 85.8
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 2.1e-51 205.7 171 63.2
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 2.8e-51 205.3 172 62.8
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 2.8e-51 205.3 170 64.1
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 4.8e-51 204.5 172 62.2
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 4.8e-51 204.5 171 62.6
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 4.8e-51 204.5 121 82.6
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 8.2e-51 203.8 174 63.8
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 8.2e-51 203.8 115 84.3
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 1.1e-50 203.4 114 86.0
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 1.1e-50 203.4 171 63.2
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.1e-50 203.4 174 63.8
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 1.1e-50 203.4 113 88.5
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 1.1e-50 203.4 114 86.0
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 1.4e-50 203.0 169 63.3
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 1.8e-50 202.6 170 65.3
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 1.8e-50 202.6 115 85.2
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.8e-50 202.6 113 84.1
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 2.4e-50 202.2 172 62.8
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 2.4e-50 202.2 161 67.1
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 3.1e-50 201.8 113 84.1
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.1e-50 201.8 182 62.6
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 3.1e-50 201.8 117 82.9
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 3.1e-50 201.8 114 86.0
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 4.1e-50 201.4 171 62.0
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 4.1e-50 201.4 111 85.6
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 4.1e-50 201.4 171 62.0
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 4.1e-50 201.4 171 62.0
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 5.3e-50 201.1 115 87.0
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 6.9e-50 200.7 172 61.0
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 6.9e-50 200.7 165 65.5
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 1.2e-49 199.9 167 64.7
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 1.2e-49 199.9 167 65.3
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 1.2e-49 199.9 166 65.7
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 1.5e-49 199.5 170 63.5
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 2.6e-49 198.7 175 61.7
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 2.6e-49 198.7 175 61.7
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 3.4e-49 198.4 113 83.2
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 3.4e-49 198.4 174 62.1
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 4.5e-49 198.0 168 63.7
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 4.5e-49 198.0 111 83.8
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 4.5e-49 198.0 111 83.8
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 4.5e-49 198.0 111 84.7
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 5.8e-49 197.6 173 63.0
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 7.6e-49 197.2 111 83.8
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 7.6e-49 197.2 165 63.6
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 1.3e-48 196.4 163 65.6
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 1.3e-48 196.4 163 65.6
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 2.2e-48 195.7 113 85.8
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 5.0e-48 194.5 180 59.4
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 6.5e-48 194.1 112 85.7
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 8.4e-48 193.7 170 60.0
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 1.1e-47 193.4 112 83.0
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.4e-47 193.0 113 82.3
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 1.9e-47 192.6 167 59.3
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 2.5e-47 192.2 112 83.9
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 2.5e-47 192.2 111 83.8
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 3.2e-47 191.8 111 80.2
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 5.5e-47 191.0 113 81.4
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 9.3e-47 190.3 167 58.7
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 9.3e-47 190.3 116 81.0
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 1.2e-46 189.9 163 63.2
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 1.6e-46 189.5 167 61.1
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 1.6e-46 189.5 170 61.8
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 2.7e-46 188.7 169 61.5
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 3.5e-46 188.3 113 81.4
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 4.6e-46 188.0 113 81.4
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 7.9e-46 187.2 163 64.4
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 1.0e-45 186.8 174 60.3
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 1.3e-45 186.4 112 78.6
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 8.7e-45 183.7 169 59.8
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 5.7e-44 181.0 113 79.6
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 5.7e-44 181.0 127 70.1
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 7.4e-44 180.6 169 58.0
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 1.6e-43 179.5 110 79.1
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 1.4e-42 176.4 175 56.6
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 1.1e-39 166.8 169 55.6
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 1.1e-39 166.8 169 55.6
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 2.1e-38 162.5 111 68.5
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 6.9e-34 147.5 82 80.5
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 9.1e-34 147.1 85 88.2
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 2.6e-33 145.6 83 91.6
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 1.0e-32 143.7 120 61.7
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 2.9e-32 142.1 144 59.7
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 1.1e-31 140.2 141 56.7
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 1.1e-31 140.2 83 83.1
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 6.7e-29 131.0 74 82.4
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 1.1e-28 130.2 141 56.7
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 1.5e-28 129.8 74 81.1
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 2.0e-28 129.4 72 83.3
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 7.4e-28 127.5 74 79.7
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 9.1e-26 120.6 105 59.0
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 7.2e-23 110.9 106 55.7
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 8.8e-21 104.0 83 66.3
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 1.5e-20 103.2 128 53.1
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 4.4e-20 101.7 74 66.2
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 3.1e-18 95.5 167 41.3
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 5.0e-16 88.2 106 48.1
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 8.5e-16 87.4 82 58.5
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 3.2e-15 85.5 79 54.4
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 3.7e-11 72.0 96 53.1
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 1.8e-10 69.7 54 72.2
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 1.3e-08 63.5 105 42.9
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 5.0e-08 61.6 30 83.3
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.5e-07 60.1 102 42.2
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 1.2e-06 57.0 39 74.4


User provided reference genes

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