Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 7.4e-193 677.2 376 100.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 5.5e-71 272.3 329 51.1
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 1.5e-65 254.2 339 49.3
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 2.2e-64 250.4 329 47.7
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 6.5e-64 248.8 332 48.5
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 2.1e-62 243.8 328 48.5
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 2.2e-59 233.8 334 48.2
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 6.3e-59 232.3 336 46.7
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 6.3e-59 232.3 336 46.7
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 6.3e-59 232.3 334 48.2
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 5.3e-58 229.2 330 49.7
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.6e-57 227.6 330 49.4
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 5.9e-57 225.7 336 44.9
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.6e-54 217.6 333 46.5
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 1.4e-53 214.5 308 48.1
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.0e-52 210.7 328 49.1
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 4.4e-52 209.5 327 45.9
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 5.7e-52 209.1 328 44.2
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.2e-51 207.2 315 44.4
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.8e-51 206.8 316 45.3
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 3.7e-51 206.5 325 45.5
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 8.2e-51 205.3 270 48.5
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 8.2e-51 205.3 336 43.5
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.8e-50 204.1 331 45.0
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 3.1e-50 203.4 346 42.5
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.1e-50 203.4 328 44.5
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 9.1e-50 201.8 329 44.7
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 1.6e-49 201.1 323 44.3
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 1.0e-48 198.4 217 53.5
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 1.3e-48 198.0 333 43.5
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.3e-48 198.0 329 44.4
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 5.0e-48 196.1 198 58.1
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 6.5e-48 195.7 363 42.4
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.2e-47 193.4 329 43.5
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 7.2e-47 192.2 342 41.2
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 9.4e-47 191.8 352 40.1
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 2.1e-46 190.7 135 73.3
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 2.1e-46 190.7 340 40.9
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 2.7e-46 190.3 416 37.3
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 4.7e-46 189.5 157 64.3
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 6.1e-46 189.1 327 41.0
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.0e-45 188.3 237 48.9
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 3.0e-45 186.8 329 42.6
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 3.0e-45 186.8 328 40.9
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 4.0e-45 186.4 273 45.8
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 5.2e-45 186.0 355 40.3
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 5.2e-45 186.0 310 43.9
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 2.0e-44 184.1 345 38.6
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 2.6e-44 183.7 227 50.7
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 3.4e-44 183.3 254 48.4
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.4e-44 183.0 216 49.1
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 4.8e-43 179.5 233 45.5
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.1e-42 178.3 216 48.6
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 1.8e-42 177.6 334 38.0
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.8e-42 177.6 338 40.5
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 2.4e-42 177.2 232 47.4
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 4.1e-42 176.4 325 40.3
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 2.7e-41 173.7 336 42.0
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.5e-41 173.3 195 52.3
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 5.9e-41 172.6 183 55.2
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 7.7e-41 172.2 131 66.4
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 7.7e-41 172.2 272 43.8
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.0e-40 171.8 138 65.2
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 1.3e-40 171.4 227 45.8
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.7e-40 171.0 131 65.6
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 2.9e-40 170.2 329 40.1
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 3.8e-40 169.9 131 66.4
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 6.5e-40 169.1 193 50.8
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 1.5e-39 167.9 332 38.6
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 1.9e-39 167.5 293 41.6
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.9e-39 167.5 219 47.0
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 2.5e-39 167.2 297 44.4
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 3.2e-39 166.8 328 37.2
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 4.2e-39 166.4 138 63.8
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 1.2e-38 164.9 222 49.1
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 1.6e-38 164.5 239 46.0
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 3.6e-38 163.3 327 38.8
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 4.7e-38 162.9 240 47.1
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 8.0e-38 162.2 336 37.5
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 8.0e-38 162.2 356 36.5
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 1.0e-37 161.8 334 37.1
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 1.4e-37 161.4 392 36.2
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 1.8e-37 161.0 250 42.8
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 6.8e-37 159.1 356 35.4
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 8.8e-37 158.7 246 41.5
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.6e-36 157.1 358 37.4
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 9.8e-36 155.2 118 66.9
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.3e-35 154.8 402 34.3
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.1e-34 151.8 240 43.8
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.4e-34 151.4 332 36.1
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 1.4e-34 151.4 332 36.1
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 4.1e-34 149.8 240 43.3
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 4.1e-34 149.8 276 41.7
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 5.9e-33 146.0 244 39.8
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 1.5e-31 141.4 213 43.7
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 8.0e-30 135.6 179 44.1
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 6.8e-29 132.5 195 45.6
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 8.9e-29 132.1 114 65.8
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 2.6e-28 130.6 189 43.4
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 4.4e-28 129.8 115 60.0
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.6e-25 121.3 224 37.9
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 3.5e-25 120.2 225 36.4
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 2.5e-23 114.0 184 41.8
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 5.6e-23 112.8 325 31.7
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 3.1e-21 107.1 113 55.8
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 5.8e-20 102.8 83 65.1
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 3.7e-19 100.1 80 63.8
FAN08G2149 Fragaria x ananassa HOM05D006063 ORTHO05D000023 8.9e-13 79.0 211 34.6
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 4.6e-09 66.6 307 31.3
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 7.8e-09 65.9 48 70.8
TPR.G14651 Trifolium pratense HOM05D006063 ORTHO05D000023 1.5e-07 61.6 198 37.4
CBR_g8884 Chara braunii HOM05D006063 ORTHO05D000023 1.9e-07 61.2 154 34.4
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 1.9e-07 61.2 40 75.0


User provided reference genes

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