Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 8.2e-50 200.3 116 100.0
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 3.9e-36 154.8 103 89.3
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 5.1e-36 154.5 103 88.3
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.6e-35 152.1 103 87.4
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 2.6e-35 152.1 103 87.4
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 3.3e-35 151.8 103 89.3
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 3.3e-35 151.8 105 87.6
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 7.4e-35 150.6 103 89.3
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.7e-35 150.2 103 86.4
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 9.7e-35 150.2 105 86.7
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 9.7e-35 150.2 105 86.7
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.3e-34 149.8 103 87.4
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.8e-34 148.7 103 87.4
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 2.8e-34 148.7 105 82.9
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 3.7e-34 148.3 103 86.4
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 4.8e-34 147.9 103 87.4
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 6.3e-34 147.5 103 84.5
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 6.3e-34 147.5 103 84.5
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 6.3e-34 147.5 104 82.7
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 8.2e-34 147.1 101 87.1
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.1e-33 146.7 104 80.8
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.4e-33 146.4 103 83.5
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 1.4e-33 146.4 103 82.5
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 1.4e-33 146.4 103 83.5
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 2.4e-33 145.6 105 80.0
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 2.4e-33 145.6 105 81.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 3.1e-33 145.2 104 82.7
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 9.1e-33 143.7 105 81.9
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 1.5e-32 142.9 103 84.5
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 2.0e-32 142.5 103 80.6
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 2.0e-32 142.5 103 83.5
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 2.6e-32 142.1 104 79.8
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.5e-32 141.7 103 81.6
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 5.9e-32 141.0 105 76.2
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 5.9e-32 141.0 105 82.9
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 7.7e-32 140.6 105 79.0
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 1.3e-31 139.8 103 77.7
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.7e-31 139.4 103 82.5
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 1.7e-31 139.4 105 78.1
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 2.9e-31 138.7 103 78.6
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 3.8e-31 138.3 103 82.5
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 5.0e-31 137.9 103 80.6
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 6.5e-31 137.5 103 80.6
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 6.5e-31 137.5 103 80.6
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 1.1e-30 136.7 105 77.1
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.1e-30 136.7 118 75.4
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 1.5e-30 136.3 105 80.0
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 1.9e-30 136.0 103 76.7
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 2.5e-30 135.6 103 75.7
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 3.2e-30 135.2 103 77.7
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 3.2e-30 135.2 105 69.5
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 4.2e-30 134.8 103 76.7
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 7.2e-30 134.0 103 80.6
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 9.4e-30 133.7 105 74.3
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 9.4e-30 133.7 102 80.4
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 9.4e-30 133.7 103 79.6
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.2e-29 133.3 103 79.6
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 1.2e-29 133.3 103 75.7
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 1.2e-29 133.3 103 78.6
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 1.2e-29 133.3 103 76.7
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 2.7e-29 132.1 104 76.0
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 2.7e-29 132.1 100 81.0
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 3.6e-29 131.7 103 76.7
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 8.0e-29 130.6 103 77.7
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 2.3e-28 129.0 105 69.5
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 2.3e-28 129.0 103 75.7
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 1.1e-27 126.7 105 68.6
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.1e-27 126.7 105 71.4
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 1.5e-27 126.3 103 71.8
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 1.5e-27 126.3 103 74.8
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 2.0e-27 125.9 105 65.7
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 3.3e-27 125.2 103 70.9
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 5.7e-27 124.4 103 72.8
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 5.7e-27 124.4 94 84.0
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.7e-27 124.4 105 67.6
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 7.4e-27 124.0 105 70.5
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 7.4e-27 124.0 105 68.6
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 9.7e-27 123.6 103 69.9
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 2.8e-26 122.1 105 70.5
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 3.7e-26 121.7 105 66.7
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 4.8e-26 121.3 103 71.8
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 6.3e-26 120.9 105 69.5
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.1e-25 120.2 105 67.6
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 1.4e-25 119.8 105 69.5
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 1.4e-25 119.8 105 69.5
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 1.4e-25 119.8 105 68.6
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 1.4e-25 119.8 103 68.9
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 1.8e-25 119.4 105 65.7
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 1.8e-25 119.4 139 56.8
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.4e-25 119.0 103 70.9
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 3.1e-25 118.6 105 68.6
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 3.1e-25 118.6 105 68.6
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 4.1e-25 118.2 103 72.8
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 5.3e-25 117.9 103 68.9
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 5.3e-25 117.9 103 66.0
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.2e-24 116.7 105 62.9
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.2e-24 116.7 103 69.9
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 1.2e-24 116.7 104 66.3
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.2e-24 116.7 103 68.9
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.5e-24 115.2 107 66.4
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 3.5e-24 115.2 101 68.3
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 4.5e-24 114.8 105 63.8
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 4.5e-24 114.8 91 72.5
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 5.9e-24 114.4 103 64.1
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 7.7e-24 114.0 105 65.7
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 1.7e-23 112.8 103 67.0
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 5.0e-23 111.3 105 64.8
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 8.5e-23 110.5 97 70.1
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 8.5e-23 110.5 105 66.7
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 1.5e-22 109.8 95 70.5
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.5e-22 109.8 106 65.1
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 1.5e-22 109.8 92 70.7
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 3.2e-22 108.6 99 66.7
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 4.2e-22 108.2 102 65.7
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 9.4e-22 107.1 105 64.8
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 1.6e-21 106.3 101 64.4
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 3.6e-21 105.1 103 64.1
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 9.7e-19 97.1 105 59.0
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 9.7e-19 97.1 105 59.0
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 9.7e-19 97.1 105 59.0
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 2.4e-17 92.4 75 74.7
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 4.1e-17 91.7 105 57.1
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 9.1e-17 90.5 77 72.7
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 1.2e-16 90.1 80 73.8
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.6e-16 89.7 75 73.3
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.0e-16 89.4 65 80.0
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 7.7e-16 87.4 85 65.9
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 3.8e-15 85.1 80 66.2
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 1.1e-14 83.6 82 64.6
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 4.2e-14 81.6 73 67.1
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 5.5e-14 81.3 94 54.3
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 1.2e-13 80.1 56 80.4
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 2.7e-13 79.0 103 47.6
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.0e-12 77.0 67 70.1
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.0e-12 77.0 67 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 6.8e-12 74.3 101 47.5
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 1.3e-10 70.1 75 61.3
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 6.3e-10 67.8 103 51.5
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 1.8e-09 66.2 68 64.7
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.7e-08 62.4 105 41.9
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 5.9e-08 61.2 85 49.4
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.9e-07 58.9 103 37.9


User provided reference genes

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