Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 2.0e-178 629.0 322 100.0
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 2.0e-82 310.1 253 65.2
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.1e-80 304.3 216 70.8
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 3.2e-80 302.8 213 71.4
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.0e-78 297.7 221 69.7
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 2.3e-78 296.6 203 70.9
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 8.8e-78 294.7 238 66.8
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 8.8e-78 294.7 242 63.6
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 3.4e-77 292.7 238 66.8
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 7.5e-77 291.6 241 64.7
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.7e-76 290.4 207 71.5
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.1e-75 287.7 238 65.5
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.8e-75 287.0 220 65.5
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 2.4e-75 286.6 206 68.9
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 5.4e-75 285.4 256 60.5
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.6e-74 283.9 215 66.5
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 2.7e-74 283.1 226 61.5
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 4.5e-74 282.3 207 69.1
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 7.7e-74 281.6 218 67.4
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.0e-73 281.2 253 60.1
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 8.6e-73 278.1 201 69.2
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 8.6e-73 278.1 224 64.3
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.5e-72 277.3 252 61.9
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.5e-72 277.3 225 64.0
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 1.5e-72 277.3 219 63.9
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 3.3e-72 276.2 207 69.6
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 5.6e-72 275.4 199 68.3
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 7.3e-72 275.0 253 58.5
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 9.5e-72 274.6 215 66.5
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 2.1e-71 273.5 209 67.0
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 4.7e-71 272.3 233 63.1
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 8.0e-71 271.6 253 61.3
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 4.0e-70 269.2 296 55.7
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 6.8e-70 268.5 188 72.3
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 8.9e-70 268.1 203 66.0
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 8.9e-70 268.1 219 62.6
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 2.0e-69 266.9 281 53.0
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 2.6e-69 266.5 203 65.5
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 2.6e-69 266.5 203 65.5
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.6e-69 266.5 238 58.0
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 3.4e-69 266.2 203 65.5
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 8.3e-68 261.5 247 59.5
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.1e-67 261.2 188 67.6
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.8e-67 260.4 204 66.7
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 3.2e-67 259.6 203 65.5
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 4.1e-67 259.2 203 64.5
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 1.2e-66 257.7 228 61.4
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 1.6e-66 257.3 251 56.6
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 1.6e-66 257.3 220 61.4
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 4.4e-61 239.2 198 60.6
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 4.4e-61 239.2 277 50.9
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 4.4e-61 239.2 238 58.0
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 5.4e-59 232.3 168 72.6
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.3e-57 227.6 160 72.5
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 3.0e-57 226.5 149 77.2
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.1e-56 224.6 197 59.9
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.9e-56 223.8 161 71.4
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 4.4e-53 212.6 190 60.5
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 8.3e-52 208.4 197 55.3
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 5.4e-51 205.7 166 62.7
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 3.5e-50 203.0 216 49.5
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 4.4e-45 186.0 197 49.2
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 1.3e-41 174.5 214 42.5
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 6.4e-36 155.6 101 78.2
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 5.4e-35 152.5 161 52.8
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 8.7e-33 145.2 148 54.1
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 1.9e-32 144.1 200 45.0
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 4.8e-31 139.4 106 67.9
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 3.2e-27 126.7 101 66.3
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.9e-24 117.5 98 61.2
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 5.3e-22 109.4 205 33.7
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 7.9e-18 95.5 80 62.5
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 1.0e-17 95.1 76 65.8
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 3.5e-10 70.1 118 36.4
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 3.0e-09 67.0 51 64.7
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 2.1e-07 60.8 220 23.6
CAN.G271.1 Capsicum annuum HOM05D003774 ORTHO05D010174 3.7e-07 60.1 120 35.8


User provided reference genes

Program Settings