Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026050001 Vitis vinifera HOM05D000100 ORTHO05D010509 5.2e-43 177.2 82 100.0
Ca_14128_v3 Cicer arietinum L. HOM05D000100 ORTHO05D000052 1.0e-09 66.6 59 57.6
Ca_14127_v3 Cicer arietinum L. HOM05D000100 ORTHO05D000052 1.7e-09 65.9 48 62.5
GSVIVG01026049001 Vitis vinifera HOM05D000100 ORTHO05D000052 6.5e-09 63.9 36 83.3
QL02p026159 Quercus lobata HOM05D000100 ORTHO05D000052 4.2e-08 61.2 48 62.5
Medtr3g009490 Medicago truncatula HOM05D000100 ORTHO05D000052 7.1e-08 60.5 48 56.2
Psat5g231480 Pisum sativum HOM05D000100 ORTHO05D000052 9.3e-08 60.1 48 56.2
TPR.G16684 Trifolium pratense HOM05D000100 ORTHO05D000052 9.3e-08 60.1 48 56.2
CSS0004506 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 1.2e-07 59.7 36 75.0
CSS0022198 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 1.2e-07 59.7 36 75.0
CSS0044620 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 1.2e-07 59.7 36 75.0
Manes.18G104600 Manihot esculenta HOM05D000100 ORTHO05D000052 1.2e-07 59.7 48 60.4
Eucgr.F02997 Eucalyptus grandis HOM05D000100 ORTHO05D000052 1.6e-07 59.3 48 58.3
Eucgr.F02998 Eucalyptus grandis HOM05D000100 ORTHO05D000052 1.6e-07 59.3 48 58.3
RcHm_v2.0_Chr7g0227951 Rosa chinensis HOM05D000100 ORTHO05D000052 2.1e-07 58.9 48 60.4
Gohir.A07G220200 Gossypium hirsutum HOM05D000100 ORTHO05D000052 2.7e-07 58.5 36 69.4
Gohir.D11G308720 Gossypium hirsutum HOM05D000100 ORTHO05D000052 2.7e-07 58.5 36 69.4
Gorai.001G261700 Gossypium raimondii HOM05D000100 ORTHO05D000052 2.7e-07 58.5 36 69.4
Gorai.001G261800 Gossypium raimondii HOM05D000100 ORTHO05D000052 2.7e-07 58.5 36 69.4
Gorai.007G340400 Gossypium raimondii HOM05D000100 ORTHO05D000052 2.7e-07 58.5 36 69.4
Medtr3g009510 Medicago truncatula HOM05D000100 ORTHO05D000052 2.7e-07 58.5 48 56.2
GSVIVG01026028001 Vitis vinifera HOM05D000100 ORTHO05D010509 2.7e-07 58.5 36 75.0
GSVIVG01026054001 Vitis vinifera HOM05D000100 ORTHO05D000052 2.7e-07 58.5 48 60.4
Thecc.08G190100 Theobroma cacao HOM05D000100 ORTHO05D000052 3.5e-07 58.2 36 69.4
Lj3g0027724 Lotus japonicus HOM05D000100 ORTHO05D000052 4.6e-07 57.8 48 54.2
RcHm_v2.0_Chr7g0227931 Rosa chinensis HOM05D000100 ORTHO05D000052 4.6e-07 57.8 48 60.4
Haze_21300 Corylus avellana HOM05D000100 ORTHO05D000052 6.1e-07 57.4 48 56.2
Prupe.1G554300 Prunus persica HOM05D000100 ORTHO05D000052 6.1e-07 57.4 48 56.2
Prupe.1G554400 Prunus persica HOM05D000100 ORTHO05D000052 6.1e-07 57.4 48 56.2
Gohir.A07G220300 Gossypium hirsutum HOM05D000100 ORTHO05D000052 7.9e-07 57.0 36 66.7
RcHm_v2.0_Chr3g0474321 Rosa chinensis HOM05D000100 ORTHO05D010509 7.9e-07 57.0 36 72.2
Haze_21302 Corylus avellana HOM05D000100 ORTHO05D000052 1.0e-06 56.6 48 58.3
Duzib116G0289 Durio zibethinus HOM05D000100 ORTHO05D000052 1.0e-06 56.6 36 66.7
FAN04G0364 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.0e-06 56.6 48 56.2
Haze_21299 Corylus avellana HOM05D000100 ORTHO05D000052 1.3e-06 56.2 48 54.2
FvH4_5g31920 Fragaria vesca HOM05D000100 ORTHO05D000052 1.8e-06 55.8 48 56.2
FAN08G0619 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.8e-06 55.8 48 56.2
FAN18G3747 Fragaria x ananassa HOM05D000100 ORTHO05D010509 1.8e-06 55.8 48 56.2
Prupe.1G547500 Prunus persica HOM05D000100 ORTHO05D000052 1.8e-06 55.8 36 66.7
Prupe.1G547800 Prunus persica HOM05D000100 ORTHO05D000052 1.8e-06 55.8 48 54.2
Thecc.08G190300 Theobroma cacao HOM05D000100 ORTHO05D000052 1.8e-06 55.8 36 66.7
Thecc.08G190500 Theobroma cacao HOM05D000100 ORTHO05D000052 1.8e-06 55.8 36 66.7
Lj3g0028182 Lotus japonicus HOM05D000100 ORTHO05D000052 3.9e-06 54.7 48 52.1
MD08G1219100 Malus domestica HOM05D000100 ORTHO05D000052 5.1e-06 54.3 49 59.2
MD15G1407600 Malus domestica HOM05D000100 ORTHO05D000052 5.1e-06 54.3 49 55.1
Psat5g231440 Pisum sativum HOM05D000100 ORTHO05D000052 5.1e-06 54.3 48 54.2
Prupe.1G547700 Prunus persica HOM05D000100 ORTHO05D000052 5.1e-06 54.3 57 49.1
MD15G1407300 Malus domestica HOM05D000100 ORTHO05D000052 6.7e-06 53.9 49 57.1
TAR624G1356 Trochodendron aralioides HOM05D000100 ORTHO05D000052 6.7e-06 53.9 36 63.9
Gohir.D07G226900 Gossypium hirsutum HOM05D000100 ORTHO05D000052 8.7e-06 53.5 36 66.7
PGR042G3740 Punica granatum HOM05D000100 ORTHO05D000052 8.7e-06 53.5 37 64.9


User provided reference genes

Program Settings