Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026028001 Vitis vinifera HOM05D000100 ORTHO05D010509 7.1e-33 143.3 69 100.0
GSVIVG01026049001 Vitis vinifera HOM05D000100 ORTHO05D000052 4.0e-12 74.3 47 80.9
CSS0022198 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 6.4e-10 67.0 44 75.0
CSS0004506 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 8.4e-10 66.6 47 72.3
CSS0044620 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 8.4e-10 66.6 47 72.3
Thecc.08G190300 Theobroma cacao HOM05D000100 ORTHO05D000052 4.6e-08 60.8 47 66.0
Thecc.08G190500 Theobroma cacao HOM05D000100 ORTHO05D000052 4.6e-08 60.8 44 68.2
GSVIVG01026054001 Vitis vinifera HOM05D000100 ORTHO05D000052 4.6e-08 60.8 47 66.0
Gohir.A07G220200 Gossypium hirsutum HOM05D000100 ORTHO05D000052 7.9e-08 60.1 47 66.0
Lj3g0028182 Lotus japonicus HOM05D000100 ORTHO05D000052 7.9e-08 60.1 47 61.7
Psat5g231480 Pisum sativum HOM05D000100 ORTHO05D000052 1.0e-07 59.7 47 61.7
Haze_21299 Corylus avellana HOM05D000100 ORTHO05D000052 1.8e-07 58.9 47 63.8
Haze_21302 Corylus avellana HOM05D000100 ORTHO05D000052 1.8e-07 58.9 47 63.8
FvH4_5g31920 Fragaria vesca HOM05D000100 ORTHO05D000052 1.8e-07 58.9 47 63.8
FAN08G0619 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.8e-07 58.9 47 63.8
FAN18G3747 Fragaria x ananassa HOM05D000100 ORTHO05D010509 1.8e-07 58.9 47 63.8
Thecc.08G190100 Theobroma cacao HOM05D000100 ORTHO05D000052 1.8e-07 58.9 47 63.8
FAN04G0364 Fragaria x ananassa HOM05D000100 ORTHO05D000052 2.3e-07 58.5 47 66.0
Gohir.A07G220300 Gossypium hirsutum HOM05D000100 ORTHO05D000052 2.3e-07 58.5 47 63.8
Ca_14127_v3 Cicer arietinum L. HOM05D000100 ORTHO05D000052 3.0e-07 58.2 47 61.7
Ca_14128_v3 Cicer arietinum L. HOM05D000100 ORTHO05D000052 3.0e-07 58.2 47 61.7
Manes.18G104600 Manihot esculenta HOM05D000100 ORTHO05D000052 3.0e-07 58.2 44 65.9
Medtr3g009510 Medicago truncatula HOM05D000100 ORTHO05D000052 3.0e-07 58.2 47 61.7
Prupe.1G554300 Prunus persica HOM05D000100 ORTHO05D000052 3.0e-07 58.2 47 63.8
Prupe.1G554400 Prunus persica HOM05D000100 ORTHO05D000052 3.0e-07 58.2 47 63.8
RcHm_v2.0_Chr7g0227951 Rosa chinensis HOM05D000100 ORTHO05D000052 3.0e-07 58.2 47 63.8
Gohir.D11G308720 Gossypium hirsutum HOM05D000100 ORTHO05D000052 5.1e-07 57.4 47 63.8
Gorai.001G261700 Gossypium raimondii HOM05D000100 ORTHO05D000052 5.1e-07 57.4 47 63.8
Gorai.001G261800 Gossypium raimondii HOM05D000100 ORTHO05D000052 5.1e-07 57.4 47 63.8
Gorai.007G340400 Gossypium raimondii HOM05D000100 ORTHO05D000052 5.1e-07 57.4 47 63.8
Lj3g0027724 Lotus japonicus HOM05D000100 ORTHO05D000052 5.1e-07 57.4 47 59.6
Haze_21300 Corylus avellana HOM05D000100 ORTHO05D000052 6.7e-07 57.0 44 63.6
RcHm_v2.0_Chr7g0227931 Rosa chinensis HOM05D000100 ORTHO05D000052 6.7e-07 57.0 47 63.8
Haze_21301 Corylus avellana HOM05D000100 ORTHO05D000052 8.7e-07 56.6 45 60.0
TAR624G1356 Trochodendron aralioides HOM05D000100 ORTHO05D000052 8.7e-07 56.6 47 61.7
Glyma.06G320800 Glycine max HOM05D000100 ORTHO05D000052 1.1e-06 56.2 47 61.7
QL02p026159 Quercus lobata HOM05D000100 ORTHO05D000052 1.1e-06 56.2 47 61.7
Eucgr.F02997 Eucalyptus grandis HOM05D000100 ORTHO05D000052 1.5e-06 55.8 40 72.5
Prupe.1G547800 Prunus persica HOM05D000100 ORTHO05D000052 1.9e-06 55.5 47 61.7
Duzib116G0289 Durio zibethinus HOM05D000100 ORTHO05D000052 2.5e-06 55.1 47 61.7
RcHm_v2.0_Chr3g0474321 Rosa chinensis HOM05D000100 ORTHO05D010509 2.5e-06 55.1 40 70.0
TPR.G16684 Trifolium pratense HOM05D000100 ORTHO05D000052 2.5e-06 55.1 47 57.4
GSVIVG01026050001 Vitis vinifera HOM05D000100 ORTHO05D010509 2.5e-06 55.1 36 75.0
MD08G1219100 Malus domestica HOM05D000100 ORTHO05D000052 3.3e-06 54.7 48 62.5
Psat5g231440 Pisum sativum HOM05D000100 ORTHO05D000052 3.3e-06 54.7 47 57.4
Eucgr.F02998 Eucalyptus grandis HOM05D000100 ORTHO05D000052 5.6e-06 53.9 40 70.0
MD15G1407300 Malus domestica HOM05D000100 ORTHO05D000052 7.4e-06 53.5 48 62.5
Nn5g27536 Nelumbo nucifera HOM05D000100 ORTHO05D000052 7.4e-06 53.5 40 70.0
TAR624G0595 Trochodendron aralioides HOM05D000100 ORTHO05D000052 7.4e-06 53.5 59 52.5


User provided reference genes

Program Settings