Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.4e-19 98.6 47 100.0
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 9.7e-18 92.4 47 91.5
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.8e-16 88.2 46 89.1
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.7e-14 81.6 46 80.4
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.2e-14 81.3 46 78.3
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 2.9e-14 80.9 46 76.1
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 3.8e-14 80.5 46 78.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 5.0e-14 80.1 46 78.3
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.1e-13 79.0 46 78.3
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.5e-13 78.6 46 73.9
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 1.5e-13 78.6 46 76.1
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.9e-13 78.2 46 73.9
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.9e-13 78.2 46 73.9
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 2.5e-13 77.8 46 76.1
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 3.2e-13 77.4 46 76.1
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.2e-13 77.0 46 71.7
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 5.5e-13 76.6 46 73.9
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 5.5e-13 76.6 46 67.4
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 5.5e-13 76.6 46 69.6
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 7.2e-13 76.3 46 73.9
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 7.2e-13 76.3 46 73.9
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 7.2e-13 76.3 46 73.9
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 7.2e-13 76.3 46 71.7
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 9.4e-13 75.9 46 76.1
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 9.4e-13 75.9 47 72.3
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 73.9
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 73.9
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 71.7
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 67.4
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 1.6e-12 75.1 45 68.9
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 67.4
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 65.2
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 71.7
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 1.6e-12 75.1 46 73.9
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.1e-12 74.7 46 69.6
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 2.7e-12 74.3 46 67.4
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 2.7e-12 74.3 46 69.6
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 2.7e-12 74.3 46 69.6
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.6e-12 73.9 46 69.6
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.6e-12 73.9 46 69.6
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 4.7e-12 73.6 46 67.4
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 4.7e-12 73.6 46 67.4
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 4.7e-12 73.6 46 67.4
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 4.7e-12 73.6 46 67.4
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 4.7e-12 73.6 46 67.4
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 4.7e-12 73.6 44 70.5
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 6.1e-12 73.2 46 69.6
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 6.1e-12 73.2 46 67.4
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 6.1e-12 73.2 46 69.6
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 6.1e-12 73.2 46 67.4
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.0e-12 72.8 46 69.6
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.0e-12 72.8 46 69.6
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.0e-12 72.8 46 69.6
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.0e-12 72.8 46 69.6
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.0e-11 72.4 46 67.4
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.0e-11 72.4 46 67.4
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.0e-11 72.4 46 67.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.0e-11 72.4 46 67.4
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.0e-11 72.4 44 75.0
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.8e-11 71.6 46 65.2
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.8e-11 71.6 45 71.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.8e-11 71.6 45 71.1
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.8e-11 71.6 46 67.4
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.8e-11 71.6 46 65.2
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 2.3e-11 71.2 46 67.4
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.3e-11 71.2 46 67.4
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.3e-11 71.2 46 67.4
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 2.3e-11 71.2 46 65.2
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.3e-11 71.2 46 65.2
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 2.3e-11 71.2 45 66.7
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 3.0e-11 70.9 46 67.4
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 3.0e-11 70.9 46 65.2
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 3.0e-11 70.9 46 65.2
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 4.0e-11 70.5 46 65.2
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 4.0e-11 70.5 46 60.9
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 5.2e-11 70.1 46 63.0
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 5.2e-11 70.1 46 65.2
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 5.2e-11 70.1 46 65.2
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 6.8e-11 69.7 46 63.0
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 6.8e-11 69.7 46 63.0
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 6.8e-11 69.7 46 67.4
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 6.8e-11 69.7 46 69.6
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 6.8e-11 69.7 45 68.9
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.5e-10 68.6 44 68.2
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 2.0e-10 68.2 46 60.9
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 2.6e-10 67.8 42 69.0
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 3.4e-10 67.4 46 65.2
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 9.8e-10 65.9 46 60.9
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.3e-09 65.5 45 62.2
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.8e-09 64.3 46 58.7
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 2.8e-09 64.3 46 60.9
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 3.7e-09 63.9 46 56.5
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 3.7e-09 63.9 46 58.7
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 8.3e-09 62.8 46 58.7
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.1e-08 62.4 46 58.7
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.4e-08 61.2 46 54.3
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 3.1e-08 60.8 46 56.5
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 7.0e-08 59.7 46 54.3
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 3.5e-07 57.4 46 54.3
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 4.5e-07 57.0 46 52.2
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.7e-06 55.1 46 58.7
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 2.2e-06 54.7 31 74.2
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 3.8e-06 53.9 46 47.8


User provided reference genes

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