Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025965001 Vitis vinifera HOM05D000005 ORTHO05D011281 1.4e-56 223.4 180 100.0
GSVIVG01025968001 Vitis vinifera HOM05D000005 ORTHO05D000012 4.4e-34 148.7 156 87.8
GSVIVG01025961001 Vitis vinifera HOM05D003563 ORTHO05D011281 7.0e-24 114.8 73 75.3
GSVIVG01025958001 Vitis vinifera HOM05D000005 ORTHO05D011281 2.9e-17 92.8 76 64.5
GSVIVG01029007001 Vitis vinifera HOM05D000005 ORTHO05D011281 2.4e-16 89.7 69 63.8
GSVIVG01037221001 Vitis vinifera HOM05D000005 ORTHO05D000012 2.7e-15 86.3 67 65.7
GSVIVG01034812001 Vitis vinifera HOM05D000005 ORTHO05D011281 1.5e-13 80.5 76 60.5
GSVIVG01025955001 Vitis vinifera HOM05D000005 ORTHO05D011281 5.6e-13 78.6 58 70.7
GSVIVG01034767001 Vitis vinifera HOM05D000005 ORTHO05D001748 3.6e-12 75.9 72 55.6
GSVIVG01037226001 Vitis vinifera HOM05D000005 ORTHO05D011281 1.4e-11 73.9 74 54.1
GSVIVG01037218001 Vitis vinifera HOM05D000005 ORTHO05D011281 3.1e-11 72.8 74 54.1
GSVIVG01037222001 Vitis vinifera HOM05D000005 ORTHO05D011281 3.1e-11 72.8 74 51.4
GSVIVG01037219001 Vitis vinifera HOM05D000005 ORTHO05D011281 1.2e-10 70.9 74 52.7
GSVIVG01037178001 Vitis vinifera HOM05D000005 ORTHO05D011281 1.5e-10 70.5 67 53.7
GSVIVG01025918001 Vitis vinifera HOM05D000005 ORTHO05D000012 2.0e-10 70.1 72 51.4
GSVIVG01020964001 Vitis vinifera HOM05D000005 ORTHO05D000012 2.6e-10 69.7 71 54.9
GSVIVG01012798001 Vitis vinifera HOM05D000005 ORTHO05D000012 2.9e-09 66.2 71 52.1
GSVIVG01019196001 Vitis vinifera HOM05D014695 ORTHO05D001748 4.9e-09 65.5 72 45.8
GSVIVG01034770001 Vitis vinifera HOM05D000005 ORTHO05D011281 2.4e-08 63.2 56 57.1
Aa31LG6G2090 Aethionema arabicum HOM05D000005 ORTHO05D011295 4.1e-08 62.4 78 44.9
AT2G17050 Arabidopsis thaliana HOM05D000005 ORTHO05D023687 4.1e-08 62.4 74 44.6
GSVIVG01001489001 Vitis vinifera HOM05D000005 ORTHO05D001748 4.1e-08 62.4 79 45.6
GSVIVG01012759001 Vitis vinifera HOM05D000005 ORTHO05D001748 7.0e-08 61.6 75 48.0
GSVIVG01000993001 Vitis vinifera HOM05D000005 ORTHO05D011281 9.2e-08 61.2 73 46.6
GSVIVG01029013001 Vitis vinifera HOM05D000005 ORTHO05D000012 9.2e-08 61.2 173 46.8
GSVIVG01034809001 Vitis vinifera HOM05D000005 ORTHO05D011281 9.2e-08 61.2 60 58.3
GSVIVG01029009001 Vitis vinifera HOM05D000005 ORTHO05D000012 1.6e-07 60.5 69 47.8
BcaB01g00505 Brassica carinata HOM05D000005 ORTHO05D019736 2.7e-07 59.7 79 41.8
C01p13460 Brassica napus HOM05D000005 ORTHO05D011295 2.7e-07 59.7 73 46.6
GSVIVG01036294001 Vitis vinifera HOM05D000005 ORTHO05D000012 2.7e-07 59.7 179 36.9
BcaB07g30465 Brassica carinata HOM05D000005 ORTHO05D012152 4.6e-07 58.9 85 36.5
Atru.chr10.819 Acer truncatum HOM05D000005 ORTHO05D000012 6.0e-07 58.5 77 40.3
Atru.chr10.820 Acer truncatum HOM05D000005 ORTHO05D000012 6.0e-07 58.5 77 40.3
arahy.Tifrunner.gnm1.ann1.T13XGJ Arachis hypogaea HOM05D000005 ORTHO05D000012 6.0e-07 58.5 61 50.8
Thecc.04G194300 Theobroma cacao HOM05D000005 ORTHO05D000012 6.0e-07 58.5 59 52.5
GSVIVG01012761001 Vitis vinifera HOM05D000005 ORTHO05D001748 6.0e-07 58.5 80 40.0
arahy.Tifrunner.gnm1.ann1.H4A7TM Arachis hypogaea HOM05D000005 ORTHO05D000012 7.8e-07 58.2 56 53.6
Carub.0007s2173 Capsella rubella HOM05D000005 ORTHO05D011295 7.8e-07 58.2 79 45.6
ECA246G1384 Erigeron canadensis HOM05D000041 ORTHO05D000452 7.8e-07 58.2 48 54.2
GSVIVG01029005001 Vitis vinifera HOM05D000005 ORTHO05D011281 7.8e-07 58.2 70 45.7
BcaC09g51403 Brassica carinata HOM05D000005 ORTHO05D011295 1.3e-06 57.4 73 45.2
A01p11410 Brassica napus HOM05D000005 ORTHO05D011295 1.3e-06 57.4 73 45.2
Nn8g40975 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.3e-06 57.4 48 52.1
arahy.Tifrunner.gnm1.ann1.5L14TG Arachis hypogaea HOM05D000005 ORTHO05D000012 1.7e-06 57.0 56 53.6
Ciclev10018693m.g Citrus clementina HOM05D000005 ORTHO05D000012 1.7e-06 57.0 61 44.3
THA.LOC104811344 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 1.7e-06 57.0 80 38.8
GSVIVG01025992001 Vitis vinifera HOM05D000005 ORTHO05D011281 1.7e-06 57.0 180 28.3
AT3G51570 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 2.3e-06 56.6 54 53.7
arahy.Tifrunner.gnm1.ann1.CN3IG1 Arachis hypogaea HOM05D000005 ORTHO05D000012 2.3e-06 56.6 55 49.1
arahy.Tifrunner.gnm1.ann1.XA8QRS Arachis hypogaea HOM05D000005 ORTHO05D000012 2.3e-06 56.6 55 49.1
C08p26780 Brassica napus HOM05D000041 ORTHO05D000061 2.3e-06 56.6 79 40.5
BolC8t50292H Brassica oleracea HOM05D000005 ORTHO05D019736 2.3e-06 56.6 79 40.5
CARHR161160 Cardamine hirsuta HOM05D000005 ORTHO05D000012 2.3e-06 56.6 54 53.7
Thhalv10010075m.g Eutrema salsugineum HOM05D000005 ORTHO05D019736 2.3e-06 56.6 77 41.6
HanXRQChr08g0209741 Helianthus annuus HOM05D000005 ORTHO05D000012 2.3e-06 56.6 47 57.4
arahy.Tifrunner.gnm1.ann1.4B9DJ7 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.0e-06 56.2 74 43.2
arahy.Tifrunner.gnm1.ann1.WA1HWC Arachis hypogaea HOM05D000005 ORTHO05D000012 3.0e-06 56.2 53 49.1
QL03p060869 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-06 56.2 69 39.1
QL03p060940 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-06 56.2 69 39.1
QL04p074333 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-06 56.2 60 50.0
QL04p074877 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-06 56.2 60 50.0
QL09p004911 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-06 56.2 75 38.7
GSVIVG01001790001 Vitis vinifera HOM05D000005 ORTHO05D000012 3.0e-06 56.2 48 56.2
BcaC06g34470 Brassica carinata HOM05D000005 ORTHO05D012152 3.9e-06 55.8 64 43.8
C07p28100 Brassica napus HOM05D000005 ORTHO05D012152 3.9e-06 55.8 64 43.8
BolC7t43345H Brassica oleracea HOM05D000005 ORTHO05D012152 3.9e-06 55.8 64 43.8
BraA01t01087Z Brassica rapa HOM05D000005 ORTHO05D011295 3.9e-06 55.8 73 45.2
BraA03t12147Z Brassica rapa HOM05D000005 ORTHO05D000012 3.9e-06 55.8 80 40.0
FvH4_7g28510 Fragaria vesca HOM05D000005 ORTHO05D000012 3.9e-06 55.8 71 38.0
FAN06G2885 Fragaria x ananassa HOM05D000015 ORTHO05D046655 3.9e-06 55.8 71 38.0
Sp2g10160 Schrenkiella parvula HOM05D000005 ORTHO05D012152 3.9e-06 55.8 53 50.9
GSVIVG01005725001 Vitis vinifera HOM05D000005 ORTHO05D001748 3.9e-06 55.8 73 41.1
GSVIVG01025957001 Vitis vinifera HOM05D000005 ORTHO05D023179 3.9e-06 55.8 62 48.4
AL8G13700 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 5.0e-06 55.5 46 56.5
arahy.Tifrunner.gnm1.ann1.02TVGL Arachis hypogaea HOM05D000005 ORTHO05D000012 5.0e-06 55.5 74 43.2
A09p44680 Brassica napus HOM05D000041 ORTHO05D000061 5.0e-06 55.5 79 39.2
BraA09t39928Z Brassica rapa HOM05D000041 ORTHO05D000061 5.0e-06 55.5 79 39.2
ECA233G6120 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.0e-06 55.5 48 52.1
GSVIVG01034805001 Vitis vinifera HOM05D000005 ORTHO05D011281 5.0e-06 55.5 60 55.0
GSVIVG01036401001 Vitis vinifera HOM05D000005 ORTHO05D001748 5.0e-06 55.5 55 49.1
GSVIVG01036407001 Vitis vinifera HOM05D000005 ORTHO05D001748 5.0e-06 55.5 55 49.1
BcaNung02558 Brassica carinata HOM05D000005 ORTHO05D015962 6.6e-06 55.1 57 47.4
Ciclev10018644m.g Citrus clementina HOM05D000005 ORTHO05D000012 6.6e-06 55.1 49 46.9
AL8G13630 Arabidopsis lyrata HOM05D000005 ORTHO05D011295 8.6e-06 54.7 77 44.2
BcaB01g00438 Brassica carinata HOM05D000005 ORTHO05D000012 8.6e-06 54.7 74 43.2
CARHR161150 Cardamine hirsuta HOM05D000005 ORTHO05D019736 8.6e-06 54.7 82 41.5
Nn8g39760 Nelumbo nucifera HOM05D000005 ORTHO05D000012 8.6e-06 54.7 55 54.5
Nn8g41080 Nelumbo nucifera HOM05D000005 ORTHO05D000012 8.6e-06 54.7 60 43.3


User provided reference genes

Program Settings