Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 7.2e-144 513.8 251 100.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 2.0e-85 319.7 264 64.8
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 3.4e-85 318.9 244 64.8
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 1.6e-82 310.1 261 64.4
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 3.0e-81 305.8 238 65.5
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 2.6e-77 292.7 239 61.9
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 7.6e-77 291.2 256 58.2
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.0e-76 290.8 243 61.7
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 1.7e-76 290.0 259 61.4
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 1.9e-75 286.6 192 69.8
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 7.1e-75 284.6 262 59.5
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 7.9e-74 281.2 195 68.2
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.3e-73 280.4 222 59.0
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.3e-73 280.4 205 64.9
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.8e-73 280.0 240 57.5
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.8e-73 280.0 241 60.6
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.9e-73 278.9 253 56.9
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 5.1e-73 278.5 193 69.4
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 6.7e-73 278.1 233 60.9
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.1e-72 277.3 256 59.0
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.5e-72 276.9 261 57.1
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 1.5e-72 276.9 255 57.6
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 3.3e-72 275.8 240 60.8
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 4.3e-72 275.4 254 58.7
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 4.3e-72 275.4 245 58.0
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.7e-72 275.0 192 66.1
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 7.4e-72 274.6 230 60.4
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 9.6e-72 274.2 224 62.1
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.3e-71 273.9 254 58.7
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.3e-71 273.9 243 57.6
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.6e-71 273.5 192 65.6
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.1e-71 273.1 252 58.7
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.8e-71 272.7 255 57.6
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.7e-71 272.3 242 56.6
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 3.7e-71 272.3 223 59.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 6.2e-71 271.6 214 61.2
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.1e-70 270.8 236 59.3
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 3.1e-70 269.2 202 63.4
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 5.3e-70 268.5 255 56.5
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 6.9e-70 268.1 174 69.0
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.5e-69 266.9 176 69.9
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.0e-69 266.5 228 59.2
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 4.5e-69 265.4 241 58.5
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 4.5e-69 265.4 180 68.9
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 5.8e-69 265.0 263 56.3
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.9e-68 262.7 251 54.6
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 6.5e-68 261.5 178 68.5
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 1.4e-67 260.4 250 55.6
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.4e-67 260.4 273 50.9
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 1.4e-67 260.4 171 69.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.9e-67 260.0 255 55.7
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.9e-67 260.0 251 57.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 3.2e-67 259.2 183 66.7
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 5.5e-67 258.5 196 62.2
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 5.5e-67 258.5 242 55.8
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.2e-66 257.3 197 59.9
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 2.7e-66 256.1 241 56.0
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 1.0e-65 254.2 248 56.0
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.8e-65 253.4 195 61.5
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 5.1e-65 251.9 188 63.3
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.5e-64 250.4 191 60.7
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.5e-64 250.4 216 57.9
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.5e-64 249.6 191 60.7
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 4.3e-64 248.8 252 54.8
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 7.4e-64 248.1 261 53.3
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.3e-63 247.3 255 53.3
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.6e-63 246.9 186 61.8
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 6.3e-63 245.0 261 52.9
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 8.2e-63 244.6 242 52.9
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.1e-62 244.2 240 52.5
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 2.4e-62 243.0 261 52.9
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 9.0e-62 241.1 265 50.6
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 2.6e-61 239.6 187 61.0
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.0e-60 237.7 260 51.9
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.2e-59 232.6 192 58.9
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 6.1e-58 228.4 209 57.9
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 8.2e-55 218.0 257 50.2
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.3e-54 215.3 190 56.3
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.5e-53 213.8 206 54.9
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 7.7e-53 211.5 195 53.8
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 2.2e-52 209.9 173 62.4
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.2e-52 209.9 191 55.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 8.5e-52 208.0 260 48.8
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 1.4e-51 207.2 186 55.9
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.1e-50 203.4 177 54.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 6.7e-49 198.4 353 36.5
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 7.2e-43 178.3 184 46.7
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 6.7e-41 171.8 130 66.9
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 5.2e-33 145.6 120 59.2
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 6.8e-33 145.2 120 58.3
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 5.7e-32 142.1 164 51.2
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 7.0e-30 135.2 216 39.4
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.5e-27 126.7 117 56.4
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 2.3e-17 93.6 112 44.6
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.2e-16 91.3 128 43.0
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 4.4e-16 89.4 63 69.8
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 9.8e-16 88.2 73 53.4
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 3.2e-14 83.2 60 65.0
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 3.2e-14 83.2 84 54.8


User provided reference genes

Program Settings