Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 1.1e-56 223.0 106 100.0
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.6e-47 192.6 106 81.1
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.3e-46 189.5 106 82.1
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.5e-45 186.0 107 81.3
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 4.7e-44 181.0 108 82.4
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 8.0e-44 180.3 97 87.6
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 3.0e-43 178.3 100 85.0
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 3.0e-43 178.3 100 85.0
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 4.0e-43 177.9 106 81.1
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.0e-43 177.9 102 83.3
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.0e-43 177.9 106 82.1
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 8.8e-43 176.8 105 80.0
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 2.6e-42 175.3 102 82.4
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 4.4e-42 174.5 105 77.1
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 4.4e-42 174.5 97 83.5
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 5.7e-42 174.1 108 77.8
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.5e-42 173.7 105 76.2
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 9.8e-42 173.3 106 80.2
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 1.3e-41 172.9 103 78.6
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.3e-41 172.9 102 77.5
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.3e-41 172.9 102 79.4
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.3e-41 172.9 102 79.4
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 2.2e-41 172.2 106 76.4
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 2.8e-41 171.8 95 82.1
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.8e-41 171.8 105 76.2
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 2.8e-41 171.8 102 79.4
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 3.7e-41 171.4 103 77.7
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 3.7e-41 171.4 105 78.1
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 4.9e-41 171.0 105 77.1
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 4.9e-41 171.0 101 78.2
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 8.3e-41 170.2 106 75.5
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 8.3e-41 170.2 106 75.5
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 8.3e-41 170.2 91 84.6
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.1e-40 169.9 95 82.1
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 1.4e-40 169.5 106 74.5
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.8e-40 169.1 90 86.7
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.4e-40 168.7 105 76.2
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.1e-40 168.3 106 74.5
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 5.4e-40 167.5 95 84.2
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 7.0e-40 167.2 91 86.8
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 2.0e-39 165.6 105 74.3
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 2.0e-39 165.6 100 77.0
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 3.5e-39 164.9 97 79.4
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 4.5e-39 164.5 96 82.3
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 4.5e-39 164.5 98 79.6
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 5.9e-39 164.1 95 81.1
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 7.8e-39 163.7 93 79.6
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 7.8e-39 163.7 104 72.1
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 7.8e-39 163.7 104 72.1
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 1.0e-38 163.3 101 73.3
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.0e-38 163.3 97 79.4
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.3e-38 162.9 85 85.9
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.7e-38 162.5 107 74.8
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 2.3e-38 162.2 105 73.3
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.9e-38 161.8 106 70.8
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 2.9e-38 161.8 102 74.5
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 2.9e-38 161.8 102 72.5
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 3.8e-38 161.4 102 72.5
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 5.0e-38 161.0 89 80.9
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 6.6e-38 160.6 107 71.0
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 6.6e-38 160.6 111 66.7
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 1.1e-37 159.8 103 75.7
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.5e-37 159.5 91 76.9
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.9e-37 159.1 107 72.0
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 1.9e-37 159.1 107 69.2
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.9e-37 159.1 107 71.0
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 4.3e-37 157.9 99 76.8
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 5.6e-37 157.5 107 69.2
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 5.6e-37 157.5 99 71.7
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 2.1e-36 155.6 84 88.1
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.1e-36 155.6 107 69.2
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 2.8e-36 155.2 89 78.7
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 3.6e-36 154.8 106 67.9
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 4.7e-36 154.5 93 76.3
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.4e-35 152.9 107 68.2
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 1.4e-35 152.9 107 68.2
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.4e-35 152.9 89 78.7
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 1.8e-35 152.5 107 68.2
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 1.8e-35 152.5 98 73.5
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.8e-35 152.5 107 68.2
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 3.0e-35 151.8 96 75.0
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 5.2e-35 151.0 105 66.7
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 6.8e-35 150.6 99 71.7
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 2.0e-34 149.1 105 65.7
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.0e-34 149.1 107 66.4
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.4e-32 142.9 89 70.8
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 3.2e-32 141.7 101 67.3
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 9.2e-32 140.2 92 70.7
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.6e-31 139.4 89 69.7
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 3.5e-31 138.3 71 90.1
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 3.5e-31 138.3 99 63.6
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 5.9e-31 137.5 95 66.3
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 2.3e-30 135.6 78 83.3
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 2.3e-30 135.6 78 83.3
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 3.9e-30 134.8 100 69.0
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.9e-29 132.5 89 66.3
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 5.6e-29 131.0 103 60.2
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 7.3e-29 130.6 73 82.2
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 2.1e-28 129.0 100 61.0
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 4.7e-28 127.9 100 61.0
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 2.6e-26 122.1 94 61.7
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 5.8e-26 120.9 98 61.2
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 9.8e-26 120.2 108 61.1
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 6.4e-25 117.5 94 55.3
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.1e-24 116.7 83 68.7
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 4.6e-23 111.3 85 60.0
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.7e-22 109.4 108 57.4
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 1.5e-21 106.3 87 56.3
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.9e-21 105.9 91 52.7
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.5e-21 105.5 104 46.2
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 4.7e-20 101.3 104 56.7
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 5.2e-19 97.8 96 46.9
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 6.6e-14 80.9 90 42.2
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 4.3e-13 78.2 56 62.5
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 4.0e-11 71.6 46 71.7
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 4.0e-11 71.6 46 71.7
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 4.4e-10 68.2 40 75.0
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 7.6e-10 67.4 54 63.0


User provided reference genes

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