Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 3.4e-90 335.1 185 100.0
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.2e-63 246.9 135 77.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 3.9e-62 241.9 134 76.1
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.1e-59 233.8 133 72.2
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.4e-59 233.4 135 72.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.5e-58 229.9 133 74.4
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.6e-58 229.2 130 72.3
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 5.8e-58 228.0 136 69.9
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.3e-57 226.9 127 74.8
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 3.8e-57 225.3 129 71.3
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 4.9e-57 224.9 134 70.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 6.5e-57 224.6 126 73.8
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 6.5e-57 224.6 127 74.0
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 8.4e-57 224.2 133 70.7
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 8.4e-57 224.2 127 71.7
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 8.4e-57 224.2 122 77.0
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.4e-56 223.4 130 70.8
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.4e-56 223.4 129 71.3
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 2.5e-56 222.6 126 75.4
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.5e-56 222.6 132 70.5
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 7.1e-56 221.1 131 68.7
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 1.2e-55 220.3 125 74.4
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 1.2e-55 220.3 130 70.8
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.7e-55 219.2 134 66.4
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 6.0e-55 218.0 131 70.2
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 7.9e-55 217.6 134 69.4
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.3e-54 216.9 125 70.4
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.8e-54 216.5 129 68.2
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 1.8e-54 216.5 131 70.2
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 3.0e-54 215.7 130 70.8
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 3.9e-54 215.3 131 70.2
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 8.7e-54 214.2 126 73.0
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.9e-53 213.0 131 67.2
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.9e-53 213.0 125 70.4
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 2.5e-53 212.6 129 65.9
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 2.5e-53 212.6 130 66.9
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 3.3e-53 212.2 126 71.4
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 3.3e-53 212.2 128 68.8
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 3.3e-53 212.2 126 72.2
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 4.3e-53 211.8 115 75.7
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 9.6e-53 210.7 126 69.8
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 9.6e-53 210.7 130 66.9
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 2.1e-52 209.5 126 69.0
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 2.1e-52 209.5 132 68.2
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 2.8e-52 209.1 130 71.5
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.7e-52 208.8 132 68.2
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.7e-52 208.8 132 68.2
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.7e-52 208.8 132 68.2
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 4.8e-52 208.4 129 68.2
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.8e-52 208.4 128 68.8
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 4.8e-52 208.4 132 65.9
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 4.8e-52 208.4 126 69.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 8.2e-52 207.6 132 65.9
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.1e-51 207.2 130 70.8
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.1e-51 207.2 130 70.8
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.1e-51 207.2 127 69.3
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.8e-51 206.5 130 70.0
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 2.4e-51 206.1 140 67.1
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 4.1e-51 205.3 130 69.2
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 4.1e-51 205.3 130 69.2
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 9.0e-51 204.1 130 70.0
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.2e-50 203.8 129 68.2
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.2e-50 203.8 120 72.5
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.2e-50 203.8 119 69.7
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.5e-50 203.4 129 66.7
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 2.0e-50 203.0 131 63.4
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.4e-50 202.2 132 63.6
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 4.5e-50 201.8 130 67.7
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 2.2e-49 199.5 126 64.3
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 3.8e-49 198.7 130 67.7
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 8.5e-49 197.6 124 64.5
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.1e-48 197.2 127 66.1
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.4e-48 196.8 129 66.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 3.2e-48 195.7 136 58.8
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.0e-46 190.7 102 75.5
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 5.1e-46 188.3 137 59.9
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 8.7e-46 187.6 165 52.1
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.5e-45 186.0 114 69.3
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 4.3e-45 185.3 164 51.8
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 8.2e-44 181.0 101 72.3
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 1.1e-43 180.6 112 63.4
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.5e-42 176.8 115 62.6
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 2.9e-41 172.6 99 75.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 3.2e-40 169.1 117 60.7
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.2e-39 167.2 107 67.3
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 2.7e-39 166.0 100 65.0
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 4.6e-39 165.2 115 56.5
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 8.8e-38 161.0 107 65.4
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.0e-37 159.8 136 54.4
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 2.2e-36 156.4 118 60.2
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.4e-35 153.7 133 54.9
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 2.0e-34 149.8 118 58.5
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 2.6e-34 149.4 87 72.4
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 3.2e-32 142.5 123 53.7
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 4.7e-31 138.7 77 71.4
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-26 124.0 89 59.6
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 4.2e-16 89.0 131 34.4
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 5.5e-16 88.6 63 61.9
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 2.6e-13 79.7 50 64.0
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 2.6e-13 79.7 45 71.1
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 6.3e-12 75.1 53 54.7


User provided reference genes

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