Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025578001 Vitis vinifera HOM05D004061 ORTHO05D004693 6.9e-122 440.7 222 100.0
TAR633G1989 Trochodendron aralioides HOM05D004061 ORTHO05D004693 2.9e-80 302.4 222 66.2
Duzib128G0701 Durio zibethinus HOM05D004061 ORTHO05D004693 1.5e-79 300.1 218 63.3
CiPaw.10G139500 Carya illinoinensis HOM05D004061 ORTHO05D004693 1.2e-78 297.0 220 62.7
CiPaw.09G185500 Carya illinoinensis HOM05D004061 ORTHO05D004693 1.6e-78 296.6 220 62.7
MSTRG.19117 Avicennia marina HOM05D004061 ORTHO05D004693 6.7e-77 291.2 211 62.1
ClCG04G008650 Citrullus lanatus HOM05D004061 ORTHO05D004693 6.7e-77 291.2 220 63.6
Lj3A975G70 Lonicera japonica HOM05D004061 ORTHO05D004693 1.5e-76 290.0 213 64.3
Nitab4.5_0006252g0020 Nicotiana tabacum HOM05D004061 ORTHO05D004693 7.5e-76 287.7 203 66.0
Haze_20694 Corylus avellana HOM05D004061 ORTHO05D004693 1.3e-75 287.0 247 56.3
Rhsim05G0184700 Rhododendron simsii HOM05D004061 ORTHO05D004693 1.7e-75 286.6 222 63.1
Cc06_g03260 Coffea canephora HOM05D004061 ORTHO05D004693 2.2e-75 286.2 208 62.5
Thecc.05G049300 Theobroma cacao HOM05D004061 ORTHO05D004693 2.8e-75 285.8 218 62.4
QL07p045968 Quercus lobata HOM05D004061 ORTHO05D004693 4.8e-75 285.0 219 62.1
Actinidia05286 Actinidia chinensis HOM05D004061 ORTHO05D004693 5.3e-74 281.6 210 66.2
Migut.L01642 Erythranthe guttata HOM05D004061 ORTHO05D004693 5.3e-74 281.6 206 64.1
CANSAT80G1299 Cannabis sativa HOM05D004061 ORTHO05D004693 1.2e-73 280.4 213 63.4
Nitab4.5_0000643g0160 Nicotiana tabacum HOM05D004061 ORTHO05D004693 3.5e-73 278.9 203 64.5
Duzib093G0371 Durio zibethinus HOM05D004061 ORTHO05D004693 5.9e-73 278.1 219 59.8
Ca_08806_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 7.7e-73 277.7 219 60.7
Oeu035162.1 Olea europaea HOM05D004061 ORTHO05D004693 7.7e-73 277.7 194 63.4
Manes.08G000500 Manihot esculenta HOM05D004061 ORTHO05D004693 2.9e-72 275.8 204 61.8
Nitab4.5_0000202g0310 Nicotiana tabacum HOM05D004061 ORTHO05D004693 3.8e-72 275.4 213 60.1
Medtr7g100150 Medicago truncatula HOM05D004061 ORTHO05D004693 1.1e-71 273.9 220 58.2
vmacro20095 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 1.1e-71 273.9 194 65.5
Potri.016G081900 Populus trichocarpa HOM05D004061 ORTHO05D004693 1.5e-71 273.5 210 62.4
Cfa017465 Carpinus fangiana HOM05D004061 ORTHO05D004693 5.5e-71 271.6 181 66.9
vmacro08681 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 1.6e-70 270.0 191 66.0
Peaxi162Scf00604g00010 Petunia axillaris HOM05D004061 ORTHO05D004693 2.1e-70 269.6 214 58.4
Sed0004679 Sechium edule HOM05D004061 ORTHO05D004693 3.6e-70 268.9 221 61.1
TPR.G21459 Trifolium pratense HOM05D004061 ORTHO05D004693 8.0e-70 267.7 223 59.6
Nn2g10562 Nelumbo nucifera HOM05D004061 ORTHO05D004693 1.0e-69 267.3 192 65.1
Nn2g12823 Nelumbo nucifera HOM05D004061 ORTHO05D004693 6.8e-69 264.6 219 58.0
MD12G1131500 Malus domestica HOM05D004061 ORTHO05D004693 8.8e-69 264.2 222 59.0
Psat0s1952g0040 Pisum sativum HOM05D004061 ORTHO05D004693 1.2e-68 263.8 221 59.7
PSO699G0012 Papaver somniferum HOM05D004061 ORTHO05D004693 1.5e-68 263.5 212 57.5
Solyc09g005960.4 Solanum lycopersicum HOM05D004061 ORTHO05D004693 2.6e-68 262.7 210 59.5
Atru.chr8.2505 Acer truncatum HOM05D004061 ORTHO05D004693 3.4e-68 262.3 219 64.4
MD04G1110000 Malus domestica HOM05D004061 ORTHO05D004693 4.4e-68 261.9 222 60.4
Sed0004085 Sechium edule HOM05D004061 ORTHO05D004693 4.4e-68 261.9 220 57.7
Sopen09g001820 Solanum pennellii HOM05D004061 ORTHO05D004693 5.7e-68 261.5 210 59.5
Cpa.g.sc114.23 Carica papaya HOM05D004061 ORTHO05D004693 7.5e-68 261.2 220 62.3
Lalb_Chr25g0289361 Lupinus albus HOM05D004061 ORTHO05D004693 7.5e-68 261.2 219 59.4
Dinv35674 Davidia involucrata HOM05D004061 ORTHO05D004693 9.8e-68 260.8 176 69.9
arahy.Tifrunner.gnm1.ann1.Y28VT2 Arachis hypogaea HOM05D004061 ORTHO05D004693 2.2e-67 259.6 215 60.0
Gohir.A01G218200 Gossypium hirsutum HOM05D004061 ORTHO05D004693 2.2e-67 259.6 214 58.9
Lj1g0024664 Lotus japonicus HOM05D004061 ORTHO05D004693 2.2e-67 259.6 207 60.9
Glyma.13G134900 Glycine max HOM05D004061 ORTHO05D004693 4.8e-67 258.5 216 56.9
Ciclev10012656m.g Citrus clementina HOM05D004061 ORTHO05D004693 8.3e-67 257.7 215 55.8
TWI74G1169 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 2.4e-66 256.1 228 56.1
Dinv35675 Davidia involucrata HOM05D004061 ORTHO05D004693 3.1e-66 255.8 155 76.1
Gorai.001G248900 Gossypium raimondii HOM05D004061 ORTHO05D004693 3.1e-66 255.8 224 53.6
TWI77G0888 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 9.1e-66 254.2 229 55.9
Sabra16G0089600 Salix brachista HOM05D004061 ORTHO05D004693 1.6e-65 253.4 254 52.0
unitig_8.g4322 Utricularia gibba HOM05D004061 ORTHO05D004693 2.0e-65 253.1 196 61.7
Phvul.007G161100 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 2.7e-65 252.7 215 55.3
MELO3C003083.2 Cucumis melo HOM05D004061 ORTHO05D004693 5.9e-65 251.5 224 60.3
CsaV3_4G024510 Cucumis sativus L. HOM05D004061 ORTHO05D004693 5.9e-65 251.5 224 62.1
Gohir.D01G207100 Gossypium hirsutum HOM05D004061 ORTHO05D004693 5.9e-65 251.5 242 51.7
Lj2C103T21 Lonicera japonica HOM05D004061 ORTHO05D004693 5.9e-65 251.5 195 63.6
Glyma.19G176300 Glycine max HOM05D004061 ORTHO05D004693 7.7e-65 251.1 205 59.5
PSO384G5009 Papaver somniferum HOM05D004061 ORTHO05D004693 7.7e-65 251.1 220 55.9
PGR004G1528 Punica granatum HOM05D004061 ORTHO05D004693 7.7e-65 251.1 212 62.3
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 1.0e-64 250.8 220 55.5
Gohir.D13G097300 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.3e-64 250.4 224 54.0
MBI05_g22082_MAGBIO Magnolia biondii HOM05D004061 ORTHO05D004693 1.3e-64 250.4 203 61.1
PGSC0003DMG400011053 Solanum tuberosum HOM05D004061 ORTHO05D004693 2.2e-64 249.6 203 56.7
Sc20g0004290 Simmondsia chinensis HOM05D004061 ORTHO05D004693 5.0e-64 248.4 215 58.1
Peaxi162Scf00597g00310 Petunia axillaris HOM05D004061 ORTHO05D004693 6.5e-64 248.1 224 55.4
Gohir.A13G095435 Gossypium hirsutum HOM05D004061 ORTHO05D004693 8.5e-64 247.7 224 53.6
Gorai.002G252200 Gossypium raimondii HOM05D004061 ORTHO05D004693 8.5e-64 247.7 242 51.7
Prupe.6G245800 Prunus persica HOM05D004061 ORTHO05D004693 2.5e-63 246.1 224 61.2
Hund12072 Selenicereus undatus HOM05D004061 ORTHO05D004693 2.5e-63 246.1 246 56.1
Solyc10g084500.1 Solanum lycopersicum HOM05D004061 ORTHO05D004693 2.5e-63 246.1 203 55.7
Sopen10g033930 Solanum pennellii HOM05D004061 ORTHO05D004693 2.5e-63 246.1 214 54.7
VMungo1383G1764 Vigna mungo HOM05D004061 ORTHO05D004693 5.5e-63 245.0 203 57.6
ECA248G1662 Erigeron canadensis HOM05D004061 ORTHO05D004693 7.2e-63 244.6 209 57.4
Glyma.10G046900 Glycine max HOM05D004061 ORTHO05D004693 7.2e-63 244.6 212 54.7
CAN.G435.5 Capsicum annuum HOM05D004061 ORTHO05D004693 9.5e-63 244.2 203 55.2
arahy.Tifrunner.gnm1.ann1.H9GTJP Arachis hypogaea HOM05D004061 ORTHO05D004693 1.2e-62 243.8 232 53.4
Lj5g0017469 Lotus japonicus HOM05D004061 ORTHO05D004693 1.2e-62 243.8 220 53.2
Lsat_1_v5_gn_1_54740 Lactuca sativa HOM05D004061 ORTHO05D004693 2.1e-62 243.0 203 58.6
Lalb_Chr20g0113041 Lupinus albus HOM05D004061 ORTHO05D004693 2.7e-62 242.7 226 54.0
Glyma.03G175700 Glycine max HOM05D004061 ORTHO05D004693 3.6e-62 242.3 200 59.0
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 4.7e-62 241.9 209 56.9
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 1.0e-61 240.7 209 57.4
arahy.Tifrunner.gnm1.ann1.9VFE0J Arachis hypogaea HOM05D004061 ORTHO05D004693 1.4e-61 240.4 218 54.1
Aqoxy4G03101 Aquilegia oxysepala HOM05D004061 ORTHO05D004693 4.0e-61 238.8 214 54.7
arahy.Tifrunner.gnm1.ann1.6R95LH Arachis hypogaea HOM05D004061 ORTHO05D004693 8.8e-61 237.7 218 53.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.2e-60 237.3 194 58.8
FvH4_6g14800 Fragaria vesca HOM05D004061 ORTHO05D004693 1.5e-60 236.9 220 55.0
FAN14G1560 Fragaria x ananassa HOM05D004061 ORTHO05D004693 1.5e-60 236.9 220 55.0
ATR0594G174 Amborella trichopoda HOM05D004061 ORTHO05D004693 4.4e-60 235.3 211 55.5
AUR62044395 Chenopodium quinoa HOM05D004061 ORTHO05D004693 7.5e-60 234.6 213 54.0
Thhalv10010698m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 7.5e-60 234.6 222 53.2
FAN05G3362 Fragaria x ananassa HOM05D004061 ORTHO05D004693 9.8e-60 234.2 220 53.2
Aa31LG10G9640 Aethionema arabicum HOM05D004061 ORTHO05D004693 2.8e-59 232.6 221 53.4
Phvul.001G172800 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 2.8e-59 232.6 200 59.5
AT3G53490 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 6.3e-59 231.5 209 55.5
C06p21460 Brassica napus HOM05D004061 ORTHO05D004693 1.1e-58 230.7 209 55.0
FAN02G3315 Fragaria x ananassa HOM05D004061 ORTHO05D004693 1.1e-58 230.7 220 55.0
HanXRQChr13g0392181 Helianthus annuus HOM05D004061 ORTHO05D004693 1.1e-58 230.7 205 55.1
THA.LOC104806513 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 1.1e-58 230.7 210 57.1
Carub.0005s2006 Capsella rubella HOM05D004061 ORTHO05D004693 3.1e-58 229.2 209 54.5
RcHm_v2.0_Chr3g0468021 Rosa chinensis HOM05D004061 ORTHO05D004693 3.1e-58 229.2 220 52.3
BolC6t37328H Brassica oleracea HOM05D004061 ORTHO05D004693 4.1e-58 228.8 209 55.0
BraA07t29848Z Brassica rapa HOM05D004061 ORTHO05D004693 4.1e-58 228.8 209 55.0
CDE07G0262 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 4.1e-58 228.8 199 56.3
A07p21670 Brassica napus HOM05D004061 ORTHO05D004693 9.2e-58 227.6 209 54.1
BcaC08g44627 Brassica carinata HOM05D004061 ORTHO05D004693 1.6e-57 226.9 209 54.5
HanXRQChr11g0349611 Helianthus annuus HOM05D004061 ORTHO05D004693 1.6e-57 226.9 209 51.7
SalBow4G2839 Salvia bowleyana HOM05D004061 ORTHO05D004693 1.6e-57 226.9 221 51.1
HPP92_006587 Vanilla planifolia HOM05D004061 ORTHO05D004693 2.0e-57 226.5 206 54.9
AL5G34410 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 1.3e-56 223.8 209 54.5
HPP92_015408 Vanilla planifolia HOM05D004061 ORTHO05D004693 2.3e-56 223.0 204 52.0
EL10Ac7g17278 Beta vulgaris HOM05D004061 ORTHO05D004693 8.6e-56 221.1 206 55.8
VMungo0720G0415 Vigna mungo HOM05D004061 ORTHO05D004693 1.1e-55 220.7 263 43.7
Os03g0282800 Oryza sativa ssp. japonica HOM05D004061 ORTHO05D004693 3.6e-54 215.7 207 52.2
SGA_v2.0_scaffold35G14186 Striga asiatica HOM05D004061 ORTHO05D004693 8.0e-54 214.5 194 53.1
Medtr1g067320 Medicago truncatula HOM05D004061 ORTHO05D004693 1.0e-53 214.2 214 47.2
Dinv37231 Davidia involucrata HOM05D004061 ORTHO05D004693 8.9e-53 211.1 138 70.3
Lalb_Chr01g0019101 Lupinus albus HOM05D004061 ORTHO05D004693 9.8e-52 207.6 222 52.3
SHI12648 Sapria himalayana HOM05D004061 ORTHO05D004693 2.9e-51 206.1 200 54.0
Oeu049603.1 Olea europaea HOM05D004061 ORTHO05D004693 1.8e-50 203.4 133 67.7
unitig_578.g16044 Utricularia gibba HOM05D004061 ORTHO05D004693 2.4e-50 203.0 203 49.3
Carub.0006s0148 Capsella rubella HOM05D004061 ORTHO05D004693 5.4e-50 201.8 213 48.8
Aa31LG10G9670 Aethionema arabicum HOM05D004061 ORTHO05D004693 1.2e-49 200.7 198 51.5
TPR.G7552 Trifolium pratense HOM05D004061 ORTHO05D004693 3.5e-49 199.1 191 48.7
Sp6g39850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 5.9e-49 198.4 200 49.5
Psat6g069360 Pisum sativum HOM05D004061 ORTHO05D004693 2.3e-48 196.4 190 48.9
Ca_11436_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 3.0e-48 196.1 206 46.1
AT5G02720 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 6.6e-48 194.9 212 44.8
THA.LOC104816298 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 2.1e-46 189.9 214 46.7
Ah.08g212360 Amaranthus hybridus HOM05D004061 ORTHO05D004693 8.0e-46 188.0 190 56.8
Pp3c2_4500 Physcomitrium patens HOM05D004061 ORTHO05D004693 8.0e-46 188.0 213 46.9
BcaC02g09159 Brassica carinata HOM05D004061 ORTHO05D004693 1.0e-45 187.6 212 46.7
PSO675G5312 Papaver somniferum HOM05D004061 ORTHO05D004693 1.0e-45 187.6 217 47.9
A10p32990 Brassica napus HOM05D004061 ORTHO05D004693 2.3e-45 186.4 230 43.0
C04p39050 Brassica napus HOM05D004061 ORTHO05D004693 3.1e-45 186.0 213 46.9
BolC4t25479H Brassica oleracea HOM05D004061 ORTHO05D004693 3.1e-45 186.0 213 46.5
BraA10t45336Z Brassica rapa HOM05D004061 ORTHO05D004693 3.4e-44 182.6 211 45.5
BcaNung03280 Brassica carinata HOM05D004061 ORTHO05D004693 4.4e-44 182.2 223 43.0
BolC9t60131H Brassica oleracea HOM05D004061 ORTHO05D004693 4.4e-44 182.2 214 45.3
HPP92_026988 Vanilla planifolia HOM05D004061 ORTHO05D004693 5.8e-44 181.8 180 47.2
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 2.2e-43 179.9 213 45.5
Pp3c17_20730 Physcomitrium patens HOM05D004061 ORTHO05D004693 7.8e-41 171.4 212 43.4
Pp3c17_20731 Physcomitrium patens HOM05D004061 ORTHO05D004693 7.8e-41 171.4 212 43.4
A04p06100 Brassica napus HOM05D004061 ORTHO05D004693 1.0e-40 171.0 212 46.2
BraA04t16312Z Brassica rapa HOM05D004061 ORTHO05D004693 1.7e-40 170.2 212 46.2
COL.COLO4_10313 Corchorus olitorius HOM05D004061 ORTHO05D004693 3.6e-38 162.5 136 63.2
Aqoxy4G03086 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 3.4e-36 156.0 191 42.9
Mapoly0179s0007 Marchantia polymorpha HOM05D004061 ORTHO05D004693 9.8e-36 154.5 260 37.3
AagrBONN_evm.TU.Sc2ySwM_117.2779 Anthoceros agrestis HOM05D004061 ORTHO05D004693 2.2e-35 153.3 211 39.3
AUR62042140 Chenopodium quinoa HOM05D004061 ORTHO05D004693 1.2e-33 147.5 135 52.6
BcaB02g08525 Brassica carinata HOM05D004061 ORTHO05D004693 1.2e-30 137.5 159 44.0
ATR0594G139 Amborella trichopoda HOM05D004061 ORTHO05D004693 1.2e-28 131.0 172 40.7
C09p73960 Brassica napus HOM05D004061 ORTHO05D004693 1.3e-27 127.5 219 35.2
BcaC06g32007 Brassica carinata HOM05D004061 ORTHO05D004693 4.9e-27 125.6 211 37.9
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 1.9e-26 123.6 145 42.1
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 5.4e-26 122.1 127 47.2
AL6G11960 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 2.3e-24 116.7 139 43.2
Thhalv10016063m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 1.1e-23 114.4 139 41.7
BcaB02g07781 Brassica carinata HOM05D004061 ORTHO05D004693 1.6e-17 94.0 72 62.5
ATR0594G136 Amborella trichopoda HOM05D004061 ORTHO05D004693 2.1e-17 93.6 150 35.3
Zm00001eb397300 Zea mays HOM05D004061 ORTHO05D004693 2.7e-17 93.2 104 45.2
Zm00001eb012900 Zea mays HOM05D004061 ORTHO05D004693 2.3e-16 90.1 65 63.1
vmacro08682 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 9.6e-15 84.7 69 58.0
CARHR210670 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.3e-14 84.3 59 61.0
Zm00001eb131400 Zea mays HOM05D004061 ORTHO05D001113 5.4e-10 68.9 99 38.4
BolC3t12673H Brassica oleracea HOM05D004061 ORTHO05D004693 9.3e-10 68.2 107 36.4
AUR62041005 Chenopodium quinoa HOM05D004061 ORTHO05D004693 9.3e-10 68.2 59 55.9
C03p01140 Brassica napus HOM05D004061 ORTHO05D004693 1.3e-08 64.3 107 36.4
Zm00001eb346430 Zea mays HOM05D004061 ORTHO05D004693 1.8e-08 63.9 58 51.7
HPP92_026989 Vanilla planifolia HOM05D004061 ORTHO05D004693 3.0e-08 63.2 56 53.6
Zm00001eb341480 Zea mays HOM05D014943 ORTHO05D019389 5.6e-07 58.9 58 48.3


User provided reference genes

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