Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 2.5e-124 448.7 219 100.0
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 4.9e-80 301.6 211 70.6
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 8.7e-77 290.8 225 62.7
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.1e-76 290.4 224 63.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.1e-76 290.4 224 63.4
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 4.3e-76 288.5 224 61.6
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.3e-75 287.0 227 61.2
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 2.8e-75 285.8 224 62.5
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.2e-73 280.4 224 60.7
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 4.5e-73 278.5 210 63.8
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.7e-72 276.6 193 68.9
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.4e-71 273.5 210 65.7
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 6.7e-69 264.6 221 59.3
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.1e-68 263.8 222 57.2
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.6e-67 260.0 222 57.7
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.6e-67 260.0 206 59.2
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 6.2e-67 258.1 218 57.3
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.5e-65 253.4 232 54.7
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 3.4e-65 252.3 228 55.3
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 7.6e-65 251.1 215 56.7
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 3.8e-64 248.8 218 54.6
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 7.1e-63 244.6 232 53.9
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 4.6e-62 241.9 220 50.9
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 6.0e-62 241.5 209 56.5
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 7.9e-62 241.1 214 57.9
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.8e-61 240.0 199 57.3
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 3.9e-61 238.8 177 60.5
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.5e-60 236.9 221 52.5
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 3.3e-60 235.7 213 55.4
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 4.3e-60 235.3 213 56.3
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 7.4e-60 234.6 214 54.7
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.1e-58 230.7 195 57.4
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 1.4e-58 230.3 230 53.0
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 2.4e-58 229.6 196 56.1
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.1e-58 229.2 230 53.0
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 9.0e-58 227.6 230 52.2
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 9.0e-58 227.6 195 54.9
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 9.0e-58 227.6 229 49.8
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 1.2e-57 227.3 208 52.9
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.5e-57 226.9 214 53.7
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 3.4e-57 225.7 215 53.5
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 3.4e-57 225.7 214 53.3
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 3.4e-57 225.7 214 53.7
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.5e-57 225.3 216 53.7
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.9e-57 224.9 208 51.9
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 5.9e-57 224.9 198 54.0
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 1.7e-56 223.4 206 54.4
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 6.5e-56 221.5 309 40.8
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.4e-55 220.3 206 53.4
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 2.5e-55 219.5 219 48.9
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.6e-54 216.9 211 52.1
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 2.3e-53 213.0 166 55.4
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 8.7e-53 211.1 189 56.1
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 8.7e-53 211.1 206 52.4
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 2.5e-52 209.5 182 52.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 3.3e-52 209.1 194 51.5
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 5.7e-52 208.4 197 48.7
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 9.7e-52 207.6 206 51.5
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.6e-51 206.8 237 48.1
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-51 206.8 206 51.5
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.8e-51 206.1 237 48.1
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.8e-51 206.1 206 51.0
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 3.7e-51 205.7 182 54.9
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 4.8e-51 205.3 215 49.8
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.8e-51 205.3 215 50.2
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 6.3e-51 204.9 192 51.6
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 8.2e-51 204.5 236 46.6
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 8.2e-51 204.5 244 45.5
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.8e-50 203.4 238 47.5
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 4.1e-50 202.2 227 48.5
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 9.1e-50 201.1 223 46.6
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.2e-49 200.7 216 49.1
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.0e-49 199.9 220 45.5
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.4e-49 199.1 194 51.0
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 4.5e-49 198.7 236 45.8
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 4.5e-49 198.7 237 46.4
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 6.5e-48 194.9 194 48.5
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 6.5e-48 194.9 209 49.3
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 2.5e-47 193.0 248 44.8
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 1.6e-46 190.3 175 49.1
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.6e-46 190.3 185 48.1
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 4.6e-46 188.7 198 49.0
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 1.8e-45 186.8 229 45.0
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 3.0e-45 186.0 173 50.9
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 6.7e-45 184.9 215 46.0
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.5e-44 183.7 211 45.5
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 9.7e-44 181.0 210 46.2
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 1.4e-42 177.2 197 48.2
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 3.1e-42 176.0 208 43.3
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 6.9e-42 174.9 194 45.4
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 5.7e-36 155.2 148 54.7
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 4.5e-33 145.6 117 59.0
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 9.4e-31 137.9 229 38.4
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 6.5e-24 115.2 110 50.9
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 3.2e-23 112.8 141 44.7
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.2e-23 112.5 82 54.9
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 5.5e-23 112.1 122 40.2
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 2.1e-22 110.2 138 42.0
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.7e-19 100.5 171 36.8
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.1e-18 95.9 61 68.9
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 4.5e-17 92.4 91 39.6
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.1e-14 83.6 78 48.7
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 5.2e-13 79.0 220 26.4
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 8.8e-13 78.2 191 30.4
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 1.5e-12 77.4 246 25.2
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.3e-11 74.3 74 50.0
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 3.8e-08 62.8 214 24.8
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 1.6e-06 57.4 54 55.6


User provided reference genes

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