Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.7e-76 289.3 145 100.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.0e-49 198.7 148 72.3
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 6.6e-49 197.6 145 71.0
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.1e-48 196.8 142 69.0
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.9e-48 196.1 145 71.0
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 3.3e-48 195.3 145 69.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 4.3e-48 194.9 147 69.4
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.1e-46 190.3 150 67.3
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 1.8e-46 189.5 151 67.5
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 3.1e-46 188.7 142 68.3
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.2e-46 188.0 148 68.9
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.5e-45 186.4 148 68.2
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 2.0e-45 186.0 148 68.2
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 2.0e-45 186.0 160 65.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.6e-45 185.7 145 67.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.4e-45 185.3 148 68.2
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.3e-44 183.3 145 69.7
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.7e-44 183.0 148 66.9
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 3.8e-44 181.8 156 66.7
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 6.4e-44 181.0 145 66.2
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.4e-43 179.9 145 64.1
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 3.2e-43 178.7 169 59.8
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 5.4e-43 177.9 153 62.7
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 9.3e-43 177.2 157 65.0
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 3.5e-42 175.3 124 73.4
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.0e-41 173.7 147 65.3
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 1.7e-41 172.9 147 63.9
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.9e-41 171.8 148 66.2
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 6.6e-41 171.0 145 67.6
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.5e-40 169.9 143 65.0
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 9.6e-40 167.2 148 65.5
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.6e-39 166.4 139 64.0
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 2.1e-39 166.0 117 73.5
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.8e-39 165.6 145 58.6
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.8e-38 162.9 92 87.0
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 3.1e-38 162.2 147 61.2
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.2e-37 160.2 114 69.3
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 7.6e-37 157.5 146 63.0
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.3e-36 156.8 90 86.7
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.7e-36 156.4 145 62.1
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.7e-36 156.4 126 68.3
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.7e-36 156.4 120 68.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 2.2e-36 156.0 147 60.5
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.8e-36 155.2 147 62.6
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.8e-36 155.2 152 58.6
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 4.9e-36 154.8 145 57.9
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 4.9e-36 154.8 146 58.9
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.9e-35 152.9 145 59.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 2.4e-35 152.5 87 85.1
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 3.2e-35 152.1 92 79.3
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 3.2e-35 152.1 147 59.9
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 7.1e-35 151.0 145 60.0
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 7.1e-35 151.0 143 60.1
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 9.3e-35 150.6 145 60.7
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.2e-34 150.2 128 61.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 3.5e-34 148.7 122 66.4
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.5e-34 148.7 88 81.8
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 4.6e-34 148.3 88 80.7
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 7.9e-34 147.5 102 73.5
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 7.9e-34 147.5 102 73.5
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 7.9e-34 147.5 146 56.8
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 7.9e-34 147.5 147 57.1
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 7.9e-34 147.5 90 80.0
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.0e-33 147.1 100 75.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 1.0e-33 147.1 91 81.3
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.8e-33 146.4 103 73.8
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.8e-33 146.4 103 73.8
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.3e-33 146.0 95 76.8
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 3.0e-33 145.6 115 67.8
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 3.9e-33 145.2 145 56.6
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 3.9e-33 145.2 143 53.8
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 6.7e-33 144.4 146 56.8
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.5e-32 143.3 149 58.4
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.5e-32 143.3 146 56.8
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 2.5e-32 142.5 88 78.4
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.3e-31 140.2 134 58.2
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.1e-31 139.4 128 63.3
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.8e-30 136.3 98 72.4
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.8e-30 136.3 112 67.9
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.8e-30 136.3 116 65.5
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 4.0e-30 135.2 87 74.7
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 4.0e-30 135.2 91 75.8
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 6.9e-30 134.4 72 83.3
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 2.6e-29 132.5 112 66.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 4.5e-29 131.7 149 55.0
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 4.5e-29 131.7 116 61.2
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.7e-28 129.8 65 90.8
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.7e-28 129.8 149 54.4
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 8.4e-28 127.5 143 54.5
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 8.4e-28 127.5 143 54.5
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 1.2e-26 123.6 109 62.4
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 2.7e-26 122.5 74 77.0
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 7.9e-26 120.9 69 79.7
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.8e-23 111.7 88 65.9
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 2.6e-21 105.9 120 50.8
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 3.4e-21 105.5 95 55.8
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.7e-20 103.2 81 65.4
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 2.0e-13 79.7 46 78.3
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.4e-11 73.6 105 40.0
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.5e-11 72.8 100 41.0
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 2.0e-08 63.2 82 36.6


User provided reference genes

Program Settings