Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 7.2e-262 906.7 471 100.0
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 4.6e-216 754.6 471 83.0
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 1.7e-215 752.7 471 82.8
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 2.5e-214 748.8 471 82.8
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 3.4e-211 738.4 482 80.3
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 1.7e-207 726.1 472 80.5
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 8.6e-207 723.8 473 80.1
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 3.3e-206 721.8 482 78.6
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 3.3e-206 721.8 472 78.6
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 3.3e-206 721.8 445 84.0
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 5.6e-206 721.1 473 80.3
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 7.3e-206 720.7 478 79.5
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 9.5e-206 720.3 442 84.6
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 1.2e-205 719.9 441 84.4
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 1.2e-205 719.9 471 79.6
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 2.1e-205 719.2 471 79.8
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 2.1e-205 719.2 471 80.7
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 1.1e-204 716.8 442 83.7
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 1.8e-204 716.1 445 83.4
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 4.0e-204 714.9 472 80.5
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 8.9e-204 713.8 471 78.3
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 1.2e-203 713.4 494 76.9
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 1.2e-203 713.4 472 80.3
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 2.0e-203 712.6 472 80.3
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 3.4e-203 711.8 472 77.8
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 7.6e-203 710.7 471 79.4
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 9.9e-203 710.3 509 75.6
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 4.9e-202 708.0 472 78.2
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 8.4e-202 707.2 471 77.9
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 1.1e-201 706.8 471 77.7
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 3.2e-201 705.3 471 79.2
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 5.4e-201 704.5 471 77.9
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 9.2e-201 703.7 477 78.0
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.2e-200 703.4 471 78.6
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 2.1e-200 702.6 473 77.6
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 4.6e-200 701.4 477 78.2
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 4.6e-200 701.4 471 78.8
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 6.0e-200 701.0 478 77.2
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 1.7e-199 699.5 473 78.2
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 3.0e-199 698.7 473 76.3
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 3.9e-199 698.4 471 78.1
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 6.6e-199 697.6 471 77.3
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 1.1e-198 696.8 455 79.1
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 1.9e-198 696.0 464 77.6
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.9e-198 696.0 473 77.4
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 4.3e-198 694.9 467 78.8
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 4.3e-198 694.9 470 76.8
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 5.6e-198 694.5 471 77.9
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 5.6e-198 694.5 471 77.1
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 9.6e-198 693.7 473 76.7
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 1.2e-197 693.3 473 76.5
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.2e-197 693.3 473 77.0
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 1.2e-197 693.3 452 80.3
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 1.6e-197 693.0 471 77.5
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 4.7e-197 691.4 441 80.3
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 1.1e-196 690.3 458 79.0
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 1.8e-196 689.5 471 76.4
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 4.0e-196 688.3 474 76.6
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 4.0e-196 688.3 465 76.3
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 5.8e-195 684.5 438 81.7
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 9.9e-195 683.7 441 80.3
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 1.7e-194 682.9 473 75.9
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 6.4e-194 681.0 442 78.5
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 8.4e-194 680.6 471 76.6
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 1.9e-193 679.5 465 75.3
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 1.9e-193 679.5 465 75.9
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 2.4e-193 679.1 465 75.5
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 3.2e-193 678.7 473 75.3
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.2e-193 678.7 442 79.9
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 5.4e-193 677.9 465 75.7
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 9.3e-193 677.2 431 81.4
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 2.1e-192 676.0 465 75.9
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 2.1e-192 676.0 471 75.8
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 2.7e-192 675.6 465 75.1
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 4.6e-192 674.9 466 75.5
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 6.0e-192 674.5 447 77.6
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 5.1e-191 671.4 470 74.3
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 8.7e-191 670.6 465 75.3
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 1.1e-190 670.2 465 74.8
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 1.5e-190 669.8 465 75.3
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 1.5e-190 669.8 478 74.3
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 2.1e-189 666.0 462 75.5
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 2.1e-189 666.0 447 77.9
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 2.8e-189 665.6 464 74.6
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 1.1e-188 663.7 465 75.3
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 3.1e-188 662.1 491 70.9
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 9.0e-188 660.6 409 84.8
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 1.7e-186 656.4 490 71.0
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 2.2e-186 656.0 489 73.2
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 1.6e-184 649.8 399 84.7
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 3.9e-183 645.2 429 80.7
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 9.6e-182 640.6 438 77.2
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 3.1e-180 635.6 427 76.6
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 1.5e-179 633.3 406 81.0
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 2.9e-178 629.0 550 64.0
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 2.9e-178 629.0 401 81.8
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 2.0e-171 606.3 421 74.6
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 7.6e-171 604.4 405 81.2
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 2.1e-168 596.3 423 75.4
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 2.3e-167 592.8 409 77.5
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 6.7e-167 591.3 391 79.5
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 2.5e-166 589.3 424 72.6
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 6.3e-165 584.7 386 76.7
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 1.9e-161 573.2 455 66.8
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 2.1e-160 569.7 423 71.2
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 3.0e-151 539.3 472 65.5
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 3.3e-150 535.8 346 82.7
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 2.5e-137 493.0 432 60.9
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 1.4e-135 487.3 360 70.6
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 5.2e-135 485.3 430 65.8
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 6.5e-130 468.4 329 72.0
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 8.3e-125 451.4 326 75.8
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 4.5e-123 445.7 435 58.2
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 1.8e-119 433.7 434 56.2
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 2.3e-114 416.8 252 87.3
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 9.8e-110 401.4 388 59.3
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.9e-92 344.0 242 76.0
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 2.0e-86 323.9 232 75.0
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 6.0e-83 312.4 195 81.5
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.7e-82 310.8 202 80.2
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.9e-76 290.8 204 74.5
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 1.6e-67 261.2 218 64.7
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.0e-66 258.5 182 79.7
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 1.7e-61 241.1 147 80.3
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 4.2e-52 209.9 472 34.7
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 3.3e-49 200.3 124 78.2
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 3.1e-39 167.2 149 60.4
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 1.1e-36 158.7 137 64.2
SEGI_32622 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 1.1e-36 158.7 137 64.2
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 5.1e-34 149.8 102 75.5
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 1.1e-33 148.7 263 41.1
Lsat_1_v5_gn_7_20760 Lactuca sativa HOM05D004269 ORTHO05D020149 1.5e-33 148.3 156 60.3
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 7.0e-31 139.4 263 39.2
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 7.0e-31 139.4 104 71.2
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 1.6e-27 128.3 106 61.3
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 1.4e-26 125.2 101 66.3
Lsat_1_v5_gn_1_18180 Lactuca sativa HOM05D000819 ORTHO05D000661 1.5e-20 105.1 120 55.8
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 1.4e-18 98.6 87 59.8
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 1.2e-14 85.5 61 65.6
AUR62004247 Chenopodium quinoa HOM05D004269 ORTHO05D021565 1.6e-14 85.1 70 61.4
AUR62035732 Chenopodium quinoa HOM05D004269 ORTHO05D021565 1.6e-14 85.1 70 61.4
Lsat_1_v5_gn_1_104560 Lactuca sativa HOM05D001098 ORTHO05D003515 4.5e-14 83.6 46 82.6
Lsat_1_v5_gn_9_124300 Lactuca sativa HOM05D001098 ORTHO05D003515 4.5e-14 83.6 46 82.6
Sabra15G0134100 Salix brachista HOM05D004269 ORTHO05D007106 2.9e-13 80.9 91 54.9
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 1.1e-12 79.0 76 56.6
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 1.6e-11 75.1 76 56.6
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 2.1e-11 74.7 131 38.9
Lsat_1_v5_gn_7_15681 Lactuca sativa HOM05D004269 ORTHO05D007106 2.7e-11 74.3 165 34.5
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 4.7e-11 73.6 109 44.0
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 6.1e-11 73.2 109 43.1
ECA236G0058 Erigeron canadensis HOM05D000039 ORTHO05D000370 6.1e-11 73.2 63 61.9
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 1.0e-10 72.4 81 51.9
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 1.4e-10 72.0 109 43.1
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 1.4e-10 72.0 109 43.1
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 1.4e-10 72.0 109 43.1
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 1.8e-10 71.6 109 43.1
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 1.8e-10 71.6 63 60.3
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 1.8e-10 71.6 64 59.4
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 2.3e-10 71.2 109 42.2
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 2.3e-10 71.2 64 59.4
Lsat_1_v5_gn_3_125120 Lactuca sativa HOM05D004623 ORTHO05D005100 1.5e-09 68.6 177 31.6
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 2.8e-08 64.3 111 41.4
CAN.G1327.6 Capsicum annuum HOM05D004269 ORTHO05D007861 2.4e-07 61.2 48 66.7
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 2.4e-07 61.2 67 47.8
AUR62005065 Chenopodium quinoa HOM05D018411 ORTHO05D021565 7.0e-07 59.7 57 56.1
CARHR249580 Cardamine hirsuta HOM05D004269 ORTHO05D021565 1.2e-06 58.9 57 61.4
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 1.6e-06 58.5 45 64.4
BcaC07g37638 Brassica carinata HOM05D004269 ORTHO05D016737 4.5e-06 57.0 39 69.2
Lsat_1_v5_gn_3_20180 Lactuca sativa HOM05D000819 ORTHO05D000661 4.5e-06 57.0 63 55.6


User provided reference genes

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