Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025485001 Vitis vinifera HOM05D004673 ORTHO05D005596 1.3e-67 261.2 137 100.0
GSVIVG01025482001 Vitis vinifera HOM05D004673 ORTHO05D005596 8.5e-32 142.1 128 64.1
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 4.1e-26 123.2 141 56.7
GSVIVG01025484001 Vitis vinifera HOM05D004673 ORTHO05D005596 9.1e-26 122.1 130 59.2
Sabra01G0002200 Salix brachista HOM05D004673 ORTHO05D005596 1.6e-25 121.3 138 59.4
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 2.6e-25 120.6 138 54.3
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 2.6e-25 120.6 147 56.5
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 5.9e-25 119.4 142 57.7
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 1.0e-24 118.6 136 57.4
Ciclev10018053m.g Citrus clementina HOM05D004673 ORTHO05D005596 1.1e-23 115.2 125 60.0
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 1.5e-23 114.8 141 53.2
QL01p004480 Quercus lobata HOM05D004673 ORTHO05D005596 2.5e-23 114.0 139 52.5
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 2.5e-23 114.0 140 52.1
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 4.2e-23 113.2 139 58.3
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 4.2e-23 113.2 141 51.8
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 7.2e-23 112.5 140 51.4
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 7.2e-23 112.5 116 60.3
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 9.4e-23 112.1 144 52.8
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 1.6e-22 111.3 142 52.1
MBI11_g38090_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 4.7e-22 109.8 136 53.7
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 6.1e-22 109.4 131 52.7
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 8.0e-22 109.0 129 53.5
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 8.0e-22 109.0 128 53.1
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 8.0e-22 109.0 126 52.4
Manes.03G086903 Manihot esculenta HOM05D004673 ORTHO05D005596 1.8e-21 107.8 139 52.5
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 2.3e-21 107.5 140 52.9
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 5.2e-21 106.3 139 52.5
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 5.2e-21 106.3 140 53.6
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 1.5e-20 104.8 139 49.6
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 2.6e-20 104.0 145 49.7
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 2.6e-20 104.0 132 49.2
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 2.6e-20 104.0 115 56.5
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 3.3e-20 103.6 136 48.5
DCAR_030113 Daucus carota HOM05D004673 ORTHO05D005596 5.7e-20 102.8 138 48.6
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 5.7e-20 102.8 137 49.6
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 7.5e-20 102.4 131 48.9
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 1.3e-19 101.7 143 50.3
DCAR_030116 Daucus carota HOM05D004673 ORTHO05D005596 1.7e-19 101.3 132 48.5
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 2.2e-19 100.9 138 48.6
QL01p004727 Quercus lobata HOM05D004673 ORTHO05D005596 2.2e-19 100.9 142 49.3
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 3.7e-19 100.1 131 54.2
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 6.3e-19 99.4 146 47.3
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 8.2e-19 99.0 153 47.1
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 1.1e-18 98.6 144 50.0
COL.COLO4_13599 Corchorus olitorius HOM05D004673 ORTHO05D005596 5.3e-18 96.3 145 46.2
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 1.2e-17 95.1 143 44.8
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 1.2e-17 95.1 140 47.9
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 1.6e-17 94.7 137 43.8
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 1.6e-17 94.7 145 46.9
MBI11_g31286_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 2.0e-17 94.4 119 53.8
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 2.0e-17 94.4 140 47.9
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 2.7e-17 94.0 136 46.3
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 3.5e-17 93.6 133 46.6
HanXRQChr07g0187121 Helianthus annuus HOM05D004673 ORTHO05D005596 3.5e-17 93.6 137 43.1
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 5.9e-17 92.8 122 49.2
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 1.3e-16 91.7 131 49.6
GSVIVG01025479001 Vitis vinifera HOM05D004673 ORTHO05D005596 2.9e-16 90.5 142 40.8
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 3.8e-16 90.1 146 45.9
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 8.5e-16 89.0 149 47.0
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 1.1e-15 88.6 143 45.5
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 1.1e-15 88.6 134 44.8
ECA233G2517 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-15 88.6 136 45.6
THA.LOC104816064 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 1.2e-14 85.1 129 45.0
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 4.7e-14 83.2 142 43.7
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 6.1e-14 82.8 132 42.4
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 6.1e-14 82.8 141 44.7
COL.COLO4_13600 Corchorus olitorius HOM05D004673 ORTHO05D005596 8.0e-14 82.4 144 43.8
ECA240G1657 Erigeron canadensis HOM05D004673 ORTHO05D005596 8.0e-14 82.4 133 44.4
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 1.0e-13 82.0 121 45.5
Gohir.A11G259500 Gossypium hirsutum HOM05D004673 ORTHO05D005596 5.2e-13 79.7 145 42.8
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 6.8e-13 79.3 95 51.6
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 1.5e-12 78.2 125 48.0
Nn1g03613 Nelumbo nucifera HOM05D004673 ORTHO05D005596 2.0e-12 77.8 131 44.3
Aa31LG5G14520 Aethionema arabicum HOM05D004673 ORTHO05D005596 4.4e-12 76.6 130 42.3
CARHR078050 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.4e-12 76.6 131 39.7
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 5.7e-12 76.3 139 45.3
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 9.8e-12 75.5 145 39.3
DCAR_030125 Daucus carota HOM05D004673 ORTHO05D005596 1.3e-11 75.1 121 39.7
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 1.7e-11 74.7 139 45.3
Carub.0003s0318 Capsella rubella HOM05D004673 ORTHO05D005596 3.7e-11 73.6 143 37.8
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 3.7e-11 73.6 90 51.1
BolC3t16332H Brassica oleracea HOM05D004673 ORTHO05D005596 3.1e-10 70.5 136 39.0
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 5.4e-10 69.7 113 44.2
THA.LOC104821143 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 5.4e-10 69.7 140 40.0
BraA03t12522Z Brassica rapa HOM05D004673 ORTHO05D005596 7.0e-10 69.3 138 38.4
Thhalv10027707m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 9.1e-10 68.9 128 39.8
AT4G04220 Arabidopsis thaliana HOM05D004673 ORTHO05D005596 1.6e-09 68.2 132 38.6
BcaB07g31134 Brassica carinata HOM05D004673 ORTHO05D005596 1.6e-09 68.2 133 36.8
A03p33470 Brassica napus HOM05D004673 ORTHO05D005596 1.6e-09 68.2 137 38.0
C03p40670 Brassica napus HOM05D004673 ORTHO05D005596 1.6e-09 68.2 136 37.5
CARHR253250 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.7e-09 67.4 135 37.0
Nn1g04563 Nelumbo nucifera HOM05D004673 ORTHO05D005596 2.7e-09 67.4 114 43.9
C09p23810 Brassica napus HOM05D004673 ORTHO05D005596 3.5e-09 67.0 131 36.6
A09p18980 Brassica napus HOM05D004673 ORTHO05D005596 4.5e-09 66.6 131 35.9
BraA09t37516Z Brassica rapa HOM05D004673 ORTHO05D005596 4.5e-09 66.6 131 35.9
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 5.9e-09 66.2 86 53.5
Carub.0006s3213 Capsella rubella HOM05D004673 ORTHO05D005596 1.3e-08 65.1 120 38.3
Sp3g02900 Schrenkiella parvula HOM05D004673 ORTHO05D005596 1.7e-08 64.7 132 37.1
CARHR253360 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.9e-08 63.9 118 38.1
CARHR253220 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.8e-08 63.5 120 36.7
Carub.0004s0335 Capsella rubella HOM05D000053 ORTHO05D000035 5.0e-08 63.2 115 35.7
Thhalv10027711m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 5.0e-08 63.2 137 32.8
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 1.9e-07 61.2 90 47.8
BcaC04g22073 Brassica carinata HOM05D000897 ORTHO05D000716 2.5e-07 60.8 118 37.3
Aa31LG5G14510 Aethionema arabicum HOM05D004673 ORTHO05D005596 5.5e-07 59.7 120 37.5
HPP92_013962 Vanilla planifolia HOM05D004673 ORTHO05D005596 5.5e-07 59.7 135 40.0
Prupe.2G304800 Prunus persica HOM05D000071 ORTHO05D000029 7.2e-07 59.3 144 35.4
Carub.0004s0336 Capsella rubella HOM05D000053 ORTHO05D000035 1.6e-06 58.2 134 33.6
DCAR_030027 Daucus carota HOM05D002953 ORTHO05D003249 2.1e-06 57.8 87 43.7
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 2.1e-06 57.8 68 52.9
Phvul.008G043400 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 2.8e-06 57.4 121 30.6
CARHR253290 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.6e-06 57.0 133 36.1
HPP92_013963 Vanilla planifolia HOM05D004673 ORTHO05D005596 3.6e-06 57.0 136 38.2
Carub.0004s0341 Capsella rubella HOM05D000053 ORTHO05D000035 8.0e-06 55.8 115 36.5
Nn1g07051 Nelumbo nucifera HOM05D004673 ORTHO05D005596 8.0e-06 55.8 92 44.6
SGA_v2.0_scaffold439G51648 Striga asiatica HOM05D000071 ORTHO05D000029 8.0e-06 55.8 118 34.7


User provided reference genes

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