Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 7.7e-29 129.8 66 100.0
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 2.0e-13 78.6 68 63.2
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 4.5e-13 77.4 65 63.1
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 4.5e-13 77.4 61 70.5
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 7.8e-13 76.6 41 87.8
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 1.0e-12 76.3 62 64.5
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 1.0e-12 76.3 63 66.7
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 1.0e-12 76.3 67 64.2
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 1.3e-12 75.9 54 70.4
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 1.3e-12 75.9 67 64.2
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 1.7e-12 75.5 42 85.7
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 1.7e-12 75.5 43 83.7
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 2.3e-12 75.1 45 77.8
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 2.3e-12 75.1 61 68.9
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 2.3e-12 75.1 55 70.9
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 2.9e-12 74.7 64 65.6
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 3.9e-12 74.3 49 75.5
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 3.9e-12 74.3 39 89.7
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 3.9e-12 74.3 54 72.2
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 8.6e-12 73.2 55 70.9
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 1.1e-11 72.8 51 74.5
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 1.1e-11 72.8 62 67.7
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.5e-11 72.4 59 64.4
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.5e-11 72.4 59 64.4
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.5e-11 72.4 59 64.4
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.9e-11 72.0 59 64.4
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.9e-11 72.0 57 70.2
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.9e-11 72.0 57 70.2
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 1.9e-11 72.0 57 70.2
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 2.5e-11 71.6 44 77.3
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 2.5e-11 71.6 56 69.6
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 2.5e-11 71.6 55 65.5
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 2.5e-11 71.6 54 70.4
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 3.3e-11 71.2 43 79.1
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 4.3e-11 70.9 47 74.5
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 4.3e-11 70.9 49 69.4
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 4.3e-11 70.9 43 81.4
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 4.3e-11 70.9 69 60.9
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 7.3e-11 70.1 60 63.3
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 7.3e-11 70.1 60 65.0
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 9.5e-11 69.7 60 63.3
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 9.5e-11 69.7 60 63.3
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 9.5e-11 69.7 44 79.5
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 1.2e-10 69.3 48 68.8
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 1.2e-10 69.3 47 76.6
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 1.2e-10 69.3 47 76.6
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 1.2e-10 69.3 47 76.6
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 1.2e-10 69.3 60 63.3
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 1.2e-10 69.3 64 60.9
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 1.2e-10 69.3 54 66.7
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 1.6e-10 68.9 47 76.6
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 1.6e-10 68.9 52 75.0
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 1.6e-10 68.9 39 84.6
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 1.6e-10 68.9 49 71.4
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.6e-10 68.9 43 79.1
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 2.1e-10 68.6 56 66.1
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 2.1e-10 68.6 61 63.9
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 2.8e-10 68.2 56 71.4
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 2.8e-10 68.2 44 79.5
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 2.8e-10 68.2 40 82.5
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 3.6e-10 67.8 47 72.3
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 3.6e-10 67.8 47 74.5
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 3.6e-10 67.8 43 79.1
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 4.7e-10 67.4 43 76.7
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 4.7e-10 67.4 45 75.6
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 6.1e-10 67.0 49 69.4
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 6.1e-10 67.0 54 68.5
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 6.1e-10 67.0 54 68.5
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 8.0e-10 66.6 48 66.7
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 1.0e-09 66.2 52 65.4
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.0e-09 66.2 52 65.4
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 1.8e-09 65.5 42 76.2
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 2.3e-09 65.1 47 68.1
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 2.3e-09 65.1 61 62.3
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 3.1e-09 64.7 39 76.9
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 3.1e-09 64.7 42 76.2
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 4.0e-09 64.3 45 71.1
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 4.0e-09 64.3 56 60.7
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 5.2e-09 63.9 38 78.9
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 5.2e-09 63.9 39 76.9
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 6.8e-09 63.5 48 70.8
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 8.9e-09 63.2 61 60.7
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 1.2e-08 62.8 53 66.0
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.2e-08 62.8 37 75.7
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 2.0e-08 62.0 53 58.5
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 2.0e-08 62.0 48 68.8
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 2.6e-08 61.6 40 75.0
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 2.6e-08 61.6 40 75.0
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 3.4e-08 61.2 50 62.0
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 3.4e-08 61.2 40 70.0
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 1.3e-07 59.3 64 57.8
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 1.7e-07 58.9 49 63.3
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 1.7e-07 58.9 49 63.3
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 1.1e-06 56.2 41 65.9


User provided reference genes

Program Settings