Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 8.9e-254 879.8 445 100.0
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.2e-181 640.2 428 75.9
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.5e-181 639.8 425 75.3
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 2.0e-181 639.4 383 81.7
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.0e-181 639.4 429 75.8
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.9e-180 635.6 424 74.8
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 1.6e-178 629.8 443 72.2
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 6.1e-178 627.9 435 73.3
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 1.4e-177 626.7 408 74.3
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 4.4e-176 621.7 389 77.1
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 2.8e-175 619.0 435 70.6
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 1.8e-174 616.3 419 72.6
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 2.4e-174 615.9 425 71.5
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 2.4e-174 615.9 429 73.2
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 9.1e-174 614.0 383 78.3
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 1.2e-173 613.6 383 78.3
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 3.5e-173 612.1 423 70.7
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 4.5e-173 611.7 423 70.9
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.0e-172 610.5 391 76.0
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.3e-172 610.1 436 70.2
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.3e-172 610.1 423 72.3
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 1.7e-172 609.8 431 70.8
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 2.2e-172 609.4 386 76.9
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.9e-172 609.0 429 70.9
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 3.8e-172 608.6 425 72.9
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 3.8e-172 608.6 424 69.8
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 5.0e-172 608.2 434 71.2
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 6.5e-172 607.8 429 72.0
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 8.5e-172 607.4 383 77.0
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 8.5e-172 607.4 437 70.5
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 1.1e-171 607.1 395 75.9
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.1e-171 607.1 391 75.7
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.1e-171 607.1 391 75.7
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 2.5e-171 605.9 423 73.0
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.2e-171 605.5 426 70.7
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.2e-171 605.1 426 70.7
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 5.5e-171 604.7 424 71.0
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 7.2e-171 604.4 383 75.7
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 1.2e-170 603.6 381 77.2
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.2e-170 603.6 436 69.3
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 2.1e-170 602.8 429 71.3
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 2.1e-170 602.8 434 69.4
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 2.1e-170 602.8 423 71.9
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.6e-170 602.1 434 69.6
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.6e-170 602.1 383 76.2
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 3.6e-170 602.1 429 70.9
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.1e-170 601.3 433 69.7
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 8.0e-170 600.9 383 75.7
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 1.0e-169 600.5 384 76.0
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.0e-169 600.5 430 69.3
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.0e-169 600.5 430 69.3
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.0e-169 600.5 434 69.6
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 1.0e-169 600.5 434 69.6
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 1.8e-169 599.7 436 68.6
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.8e-169 599.7 435 68.7
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 2.3e-169 599.4 426 70.9
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 3.0e-169 599.0 444 68.0
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 4.0e-169 598.6 419 70.4
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 5.2e-169 598.2 391 74.4
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 6.7e-169 597.8 430 70.0
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 6.7e-169 597.8 391 74.4
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 6.7e-169 597.8 381 75.9
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 8.8e-169 597.4 384 75.5
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 1.2e-168 597.0 429 69.0
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 1.2e-168 597.0 427 68.6
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 1.5e-168 596.7 383 74.7
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 2.0e-168 596.3 383 74.9
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 4.4e-168 595.1 424 70.8
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 4.4e-168 595.1 424 70.8
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 5.7e-168 594.7 416 70.7
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 9.7e-168 594.0 428 70.3
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 9.7e-168 594.0 427 69.1
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 3.7e-167 592.0 383 75.2
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 6.3e-167 591.3 382 75.1
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 1.8e-166 589.7 428 68.9
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 1.8e-166 589.7 376 76.6
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 1.8e-166 589.7 463 65.7
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 2.4e-166 589.3 382 75.9
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.4e-166 589.3 384 74.2
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 3.1e-166 589.0 434 69.8
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 4.1e-166 588.6 384 74.5
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 4.1e-166 588.6 436 69.0
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 5.3e-166 588.2 384 74.2
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 5.3e-166 588.2 384 74.2
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 5.3e-166 588.2 384 74.2
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 5.3e-166 588.2 384 74.2
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 5.3e-166 588.2 384 74.2
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 5.3e-166 588.2 385 74.0
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 5.3e-166 588.2 430 68.1
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 5.3e-166 588.2 384 74.0
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 7.0e-166 587.8 387 73.9
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 7.0e-166 587.8 398 72.6
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 7.0e-166 587.8 384 74.2
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 7.0e-166 587.8 384 74.2
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 7.0e-166 587.8 384 74.2
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 1.2e-165 587.0 384 74.2
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 1.6e-165 586.6 384 74.5
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.6e-165 586.6 384 74.0
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 1.6e-165 586.6 505 60.8
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 2.0e-165 586.3 380 74.7
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 2.0e-165 586.3 379 74.9
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.0e-165 586.3 405 72.1
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 2.0e-165 586.3 424 70.0
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 2.7e-165 585.9 409 71.9
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 4.5e-165 585.1 399 72.7
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 5.9e-165 584.7 428 68.7
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 7.7e-165 584.3 379 74.9
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.7e-165 584.3 409 71.6
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 1.3e-164 583.6 388 72.4
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 1.7e-164 583.2 379 74.4
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 5.0e-164 581.6 427 69.6
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 5.0e-164 581.6 388 74.5
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 1.1e-163 580.5 428 67.8
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.5e-163 580.1 428 68.0
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 1.9e-163 579.7 427 67.9
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.5e-163 578.2 400 72.0
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 9.4e-163 577.4 378 75.1
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 1.6e-162 576.6 427 68.6
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 2.1e-162 576.2 391 72.6
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 1.0e-161 573.9 434 66.4
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 1.4e-161 573.5 472 64.0
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 9.8e-160 567.4 446 65.7
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.7e-159 566.6 394 70.3
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 4.8e-159 565.1 423 67.4
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 2.7e-157 559.3 387 72.9
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 3.5e-157 558.9 401 70.1
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.9e-157 558.1 433 66.7
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.9e-155 553.1 395 70.1
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.5e-155 552.7 409 69.2
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 2.8e-154 549.3 395 69.1
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 7.5e-152 541.2 388 69.1
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.2e-149 533.9 426 64.1
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 2.5e-147 526.2 347 74.1
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 2.3e-145 519.6 378 68.3
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 6.8e-145 518.1 334 76.6
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 7.0e-142 508.1 343 75.2
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.0e-140 504.2 344 74.1
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 2.5e-139 499.6 337 74.2
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 3.3e-139 499.2 364 69.5
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 4.3e-139 498.8 336 75.6
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 9.5e-139 497.7 379 63.9
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 1.1e-134 484.2 344 68.9
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 4.6e-133 478.8 387 63.0
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 2.3e-129 466.5 376 61.4
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 2.6e-128 463.0 386 60.4
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 6.4e-127 458.4 429 58.0
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 2.3e-124 449.9 366 63.1
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 7.1e-118 428.3 318 66.4
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.3e-114 417.5 261 77.0
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 2.4e-110 403.3 271 74.5
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 4.9e-103 379.0 264 72.3
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 3.2e-102 376.3 382 53.4
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.2e-86 322.8 239 68.2
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 2.1e-85 320.5 230 70.4
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 3.3e-83 313.2 231 68.4
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 1.8e-76 290.8 367 42.8
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.3e-75 286.2 191 75.4
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.4e-73 281.2 181 76.2
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 2.0e-72 277.3 355 45.4
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 2.0e-64 250.8 154 74.0
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.3e-60 237.3 187 63.1
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.3e-60 237.3 187 63.1
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 3.8e-55 219.9 146 72.6
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 2.7e-53 213.8 220 57.3
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.6e-48 198.0 244 50.0
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 4.7e-37 159.8 137 58.4
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 8.9e-36 155.6 99 74.7
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.8e-28 131.3 219 43.8
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 7.0e-25 119.4 82 73.2
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.0e-23 115.5 295 34.2
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 2.8e-21 107.5 60 88.3
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 2.9e-18 97.4 66 74.2
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 2.9e-18 97.4 66 74.2
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 3.7e-18 97.1 82 63.4
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 6.0e-16 89.7 79 59.5
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.3e-14 83.6 90 50.0
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 8.9e-12 75.9 43 79.1
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 3.7e-10 70.5 50 66.0
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 2.4e-09 67.8 47 72.3
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 2.3e-07 61.2 37 75.7
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 8.6e-07 59.3 33 72.7
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 1.9e-06 58.2 79 46.8
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 3.3e-06 57.4 79 44.3
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 3.3e-06 57.4 79 46.8


User provided reference genes

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