Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 0.0e+00 1340.1 685 100.0
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 2.4e-306 1055.0 686 78.0
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 3.8e-304 1047.7 680 77.8
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 5.9e-297 1023.8 730 72.7
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 1.6e-294 1015.8 682 75.5
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 1.8e-293 1012.3 686 75.5
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 3.0e-293 1011.5 676 76.0
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 1.5e-292 1009.2 682 75.1
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 9.4e-287 989.9 677 75.2
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 8.0e-286 986.9 689 74.3
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 8.8e-285 983.4 682 74.5
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 3.3e-284 981.5 684 73.2
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 1.8e-282 975.7 686 72.7
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 1.6e-281 972.6 690 73.2
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 3.8e-280 968.0 683 71.7
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 1.5e-279 966.1 683 72.2
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 4.2e-279 964.5 683 71.6
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 2.7e-278 961.8 691 71.9
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 8.8e-277 956.8 683 70.7
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 1.1e-274 949.9 700 70.9
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 2.7e-273 945.3 689 71.8
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 1.0e-272 943.3 686 70.4
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 9.4e-271 936.8 674 71.1
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 4.0e-269 931.4 718 68.9
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 3.4e-268 928.3 686 69.2
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 7.5e-268 927.2 690 68.6
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 1.4e-266 922.9 684 70.8
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 2.7e-265 918.7 679 68.5
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 7.7e-265 917.1 705 68.1
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 1.8e-261 906.0 676 70.0
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 2.6e-260 902.1 682 68.5
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 3.4e-260 901.7 676 68.8
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 4.9e-259 897.9 676 68.3
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 1.8e-258 896.0 678 68.0
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 2.4e-258 895.6 685 69.1
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 2.4e-258 895.6 702 65.7
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 4.1e-258 894.8 692 68.1
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 5.9e-257 891.0 683 66.9
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 1.0e-256 890.2 683 67.1
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 6.6e-256 887.5 684 67.4
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 1.1e-255 886.7 685 68.8
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 1.9e-255 885.9 601 74.5
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 4.3e-255 884.8 685 67.0
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 6.1e-254 880.9 678 67.1
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 6.1e-254 880.9 724 63.1
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 2.3e-253 879.0 678 67.4
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 3.7e-251 871.7 680 66.8
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 5.4e-250 867.8 686 65.5
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 9.2e-250 867.1 682 67.0
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 7.8e-249 864.0 690 65.8
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 1.0e-248 863.6 685 65.5
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 2.5e-247 859.0 682 65.5
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 8.0e-246 854.0 687 64.5
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 2.3e-245 852.4 729 61.9
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 5.0e-240 834.7 640 67.5
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 4.7e-238 828.2 689 63.1
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 1.4e-234 816.6 681 64.6
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 2.3e-232 809.3 693 62.0
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 3.9e-232 808.5 687 61.9
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 6.2e-230 801.2 683 62.2
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 1.2e-228 797.0 686 61.7
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 2.0e-228 796.2 674 63.8
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 2.6e-228 795.8 605 67.4
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 7.6e-228 794.3 486 80.2
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 1.3e-227 793.5 684 61.5
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 1.3e-227 793.5 698 60.7
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 2.4e-226 789.3 684 61.5
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 3.2e-226 788.9 642 65.3
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 1.7e-224 783.1 684 61.3
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 1.7e-224 783.1 687 61.1
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 2.3e-224 782.7 683 60.3
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 1.1e-223 780.4 683 60.2
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 1.9e-223 779.6 686 60.6
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 2.1e-222 776.2 601 67.1
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 3.6e-222 775.4 686 61.4
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 2.4e-221 772.7 686 59.5
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 3.4e-220 768.8 683 59.0
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 1.9e-218 763.1 683 58.7
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 1.6e-217 760.0 606 66.5
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 5.6e-215 751.5 678 59.7
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 9.9e-212 740.7 688 59.0
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 8.4e-211 737.6 657 59.5
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 1.6e-209 733.4 621 61.2
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 3.9e-208 728.8 502 74.3
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 2.5e-207 726.1 680 57.1
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 9.6e-207 724.2 585 65.5
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 2.6e-204 716.1 675 58.1
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 1.7e-195 686.8 714 54.1
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 1.9e-194 683.3 698 53.3
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 6.0e-193 678.3 681 53.9
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 2.6e-188 662.9 691 54.6
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 3.4e-188 662.5 647 56.0
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 1.2e-169 600.9 690 52.5
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 2.0e-164 583.6 604 53.3
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 4.5e-148 529.3 700 45.7
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 6.6e-147 525.4 619 48.9
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 4.3e-138 496.1 298 79.2
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 4.6e-132 476.1 519 49.9
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 8.0e-129 465.3 701 41.7
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 1.1e-125 454.9 281 77.2
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 9.2e-117 425.2 357 58.8
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 6.2e-81 306.2 314 57.3
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 2.5e-74 284.3 216 64.8
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.1e-44 184.9 120 73.3
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 8.8e-43 179.5 100 82.0
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 9.8e-42 176.0 100 80.0
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 4.8e-41 173.7 96 82.3
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 3.5e-39 167.5 456 32.7
Glyma.12G071167 Glycine max HOM05D006884 ORTHO05D008604 3.6e-36 157.5 201 49.3
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.6e-31 142.1 80 80.0
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 3.8e-30 137.5 80 78.8
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.3e-19 101.7 64 75.0
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 4.4e-18 97.4 321 28.3
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 4.6e-15 87.4 51 80.4
Nitab4.5_0002186g0030 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.1e-13 82.8 47 76.6
Aa31LG3G16570 Aethionema arabicum HOM05D006884 ORTHO05D008604 5.6e-13 80.5 183 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1869 Anthoceros agrestis HOM05D006884 ORTHO05D008604 1.3e-06 59.3 192 29.2


User provided reference genes

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