Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025148001 Vitis vinifera HOM05D007887 ORTHO05D009725 2.3e-47 191.8 93 100.0
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 2.3e-23 112.1 100 65.0
Thecc.09G259300 Theobroma cacao HOM05D007887 ORTHO05D009725 8.9e-23 110.2 99 64.6
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 5.8e-22 107.5 99 60.6
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 9.9e-22 106.7 99 60.6
Manes.04G024800 Manihot esculenta HOM05D007887 ORTHO05D009725 2.4e-20 102.1 99 60.6
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 9.2e-20 100.1 89 59.6
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 2.7e-19 98.6 99 62.6
Aqoxy1G00528 Aquilegia oxysepala HOM05D007887 ORTHO05D009725 3.5e-19 98.2 93 60.2
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 4.6e-19 97.8 101 61.4
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 5.1e-18 94.4 99 57.6
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 1.9e-17 92.4 99 58.6
Haze_23901 Corylus avellana HOM05D007887 ORTHO05D009725 4.3e-17 91.3 100 58.0
RcHm_v2.0_Chr5g0060411 Rosa chinensis HOM05D007887 ORTHO05D009725 4.3e-17 91.3 97 58.8
Hma1.2p1_0071F.1_g038090 Hydrangea macrophylla HOM05D007887 ORTHO05D009725 3.6e-16 88.2 87 56.3
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 6.2e-16 87.4 98 56.1
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 8.1e-16 87.0 98 54.1
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 1.1e-15 86.7 99 53.5
FAN25G1511 Fragaria x ananassa HOM05D007887 ORTHO05D009725 4.0e-15 84.7 102 55.9
Cfa011356 Carpinus fangiana HOM05D007887 ORTHO05D009725 5.2e-15 84.3 100 54.0
FAN11G2401 Fragaria x ananassa HOM05D007887 ORTHO05D009725 5.2e-15 84.3 98 53.1
Glyma.12G071500 Glycine max HOM05D007887 ORTHO05D009725 6.4e-13 77.4 96 51.0
Prupe.6G096000 Prunus persica HOM05D007887 ORTHO05D009725 6.4e-13 77.4 81 58.0
CANSAT54G2812 Cannabis sativa HOM05D007887 ORTHO05D009725 8.4e-13 77.0 95 51.6
Glyma.11G153796 Glycine max HOM05D007887 ORTHO05D009725 1.9e-12 75.9 104 50.0
Lalb_Chr19g0137421 Lupinus albus HOM05D007887 ORTHO05D009725 3.9e-10 68.2 93 46.2
BcaC03g13976 Brassica carinata HOM05D007887 ORTHO05D009725 1.9e-09 65.9 73 43.8
BolC2t07269H Brassica oleracea HOM05D007887 ORTHO05D009725 2.5e-09 65.5 73 43.8
Ciclev10029602m.g Citrus clementina HOM05D007887 ORTHO05D009725 3.3e-09 65.1 43 83.7
COL.COLO4_05193 Corchorus olitorius HOM05D007887 ORTHO05D009725 3.3e-09 65.1 72 58.3
C02p11720 Brassica napus HOM05D007887 ORTHO05D009725 4.3e-09 64.7 73 42.5
BraA02t05730Z Brassica rapa HOM05D007887 ORTHO05D009725 4.3e-09 64.7 73 42.5
BraA02t05732Z Brassica rapa HOM05D007887 ORTHO05D009725 4.3e-09 64.7 78 44.9
Psat7g222640 Pisum sativum HOM05D007887 ORTHO05D009725 5.6e-09 64.3 76 48.7
arahy.Tifrunner.gnm1.ann1.ZKT7Q5 Arachis hypogaea HOM05D007887 ORTHO05D009725 9.6e-09 63.5 73 53.4
C03p12840 Brassica napus HOM05D007887 ORTHO05D009725 1.3e-08 63.2 73 41.1
BolC3t13748H Brassica oleracea HOM05D007887 ORTHO05D009725 1.3e-08 63.2 73 41.1
Gohir.A13G220700 Gossypium hirsutum HOM05D037992 ORTHO05D009725 1.6e-08 62.8 96 42.7
Lalb_Chr03g0027141 Lupinus albus HOM05D007887 ORTHO05D009725 2.8e-08 62.0 57 61.4
BcaB05g22638 Brassica carinata HOM05D007887 ORTHO05D009725 3.6e-08 61.6 74 43.2
BraA03t10429Z Brassica rapa HOM05D007887 ORTHO05D009725 3.6e-08 61.6 73 39.7
Lj3g0000190 Lotus japonicus HOM05D007887 ORTHO05D009725 6.2e-08 60.8 90 45.6
arahy.Tifrunner.gnm1.ann1.QG78WL Arachis hypogaea HOM05D007887 ORTHO05D009725 8.1e-08 60.5 73 50.7
Medtr4g060620 Medicago truncatula HOM05D007887 ORTHO05D009725 8.1e-08 60.5 100 43.0
arahy.Tifrunner.gnm1.ann1.5EA918 Arachis hypogaea HOM05D007887 ORTHO05D009725 1.1e-07 60.1 65 55.4
Thhalv10015113m.g Eutrema salsugineum HOM05D007887 ORTHO05D009725 1.1e-07 60.1 63 47.6
PSO339G0915 Papaver somniferum HOM05D007887 ORTHO05D009725 1.8e-07 59.3 102 41.2
TPR.G36408 Trifolium pratense HOM05D007887 ORTHO05D009725 1.8e-07 59.3 58 53.4
ClCG02G021000 Citrullus lanatus HOM05D031230 ORTHO05D028893 2.4e-07 58.9 88 47.7
Aa31LG1G12450 Aethionema arabicum HOM05D007887 ORTHO05D009725 4.0e-07 58.2 77 40.3
arahy.Tifrunner.gnm1.ann1.VU6S4B Arachis hypogaea HOM05D007887 ORTHO05D009725 4.0e-07 58.2 61 59.0
A03p11140 Brassica napus HOM05D007887 ORTHO05D009725 5.3e-07 57.8 78 41.0
CARHR274070 Cardamine hirsuta HOM05D007887 ORTHO05D009725 5.3e-07 57.8 71 43.7
CsaV3_6G021690 Cucumis sativus L. HOM05D031230 ORTHO05D028893 6.9e-07 57.4 87 41.4
Peaxi162Scf00351g00317 Petunia axillaris HOM05D023935 ORTHO05D009725 6.9e-07 57.4 91 41.8
Sp6g21990 Schrenkiella parvula HOM05D007887 ORTHO05D009725 6.9e-07 57.4 90 37.8
PGR119G2346 Punica granatum HOM05D007887 ORTHO05D009725 1.2e-06 56.6 79 49.4
BolC2t07271H Brassica oleracea HOM05D007887 ORTHO05D009725 1.5e-06 56.2 71 42.3
CDE09G0302 Ceratophyllum demersum HOM05D041108 ORTHO05D009725 1.5e-06 56.2 74 45.9
DCAR_017079 Daucus carota HOM05D007887 ORTHO05D009725 2.6e-06 55.5 52 55.8
Phvul.011G072900 Phaseolus vulgaris HOM05D007887 ORTHO05D009725 2.6e-06 55.5 96 43.8
AL8G37010 Arabidopsis lyrata HOM05D007887 ORTHO05D009725 3.4e-06 55.1 73 39.7
BcaB01g04657 Brassica carinata HOM05D007887 ORTHO05D009725 3.4e-06 55.1 78 44.9
BcaB08g36339 Brassica carinata HOM05D007887 ORTHO05D009725 3.4e-06 55.1 71 43.7
MELO3C025754.2 Cucumis melo HOM05D031230 ORTHO05D028893 3.4e-06 55.1 87 40.2
BcaC04g19700 Brassica carinata HOM05D007887 ORTHO05D009725 4.4e-06 54.7 83 41.0
C09p53030 Brassica napus HOM05D007887 ORTHO05D009725 4.4e-06 54.7 83 41.0
TPR.G11627 Trifolium pratense HOM05D007887 ORTHO05D009725 4.4e-06 54.7 78 47.4
ATR1159G094 Amborella trichopoda HOM05D041108 ORTHO05D009725 5.8e-06 54.3 96 43.8
A10p17620 Brassica napus HOM05D007887 ORTHO05D009725 5.8e-06 54.3 67 41.8
BolC9t58177H Brassica oleracea HOM05D007887 ORTHO05D009725 5.8e-06 54.3 78 38.5
BraA10t43842Z Brassica rapa HOM05D007887 ORTHO05D009725 5.8e-06 54.3 67 41.8
AT5G60400 Arabidopsis thaliana HOM05D007887 ORTHO05D009725 9.9e-06 53.5 73 41.1


User provided reference genes

Program Settings