Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 8.9e-150 533.5 254 100.0
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.9e-75 286.6 206 68.0
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 3.7e-71 272.3 181 71.3
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 8.3e-71 271.2 179 71.5
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.4e-70 269.6 177 74.0
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 5.4e-70 268.5 203 64.5
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 3.5e-69 265.8 179 70.4
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 5.9e-69 265.0 200 63.5
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 7.7e-69 264.6 159 74.2
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 2.9e-68 262.7 152 77.0
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.1e-67 260.8 175 70.3
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.5e-67 260.4 204 62.7
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.9e-67 260.0 161 73.9
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.2e-67 258.8 153 76.5
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 7.2e-67 258.1 183 66.7
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.2e-66 257.3 196 64.3
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 1.2e-66 257.3 159 76.1
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.7e-66 256.1 195 65.6
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.7e-66 256.1 180 63.9
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.7e-66 256.1 174 67.8
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 3.6e-66 255.8 176 68.2
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 4.7e-66 255.4 179 67.0
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 4.7e-66 255.4 195 65.1
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.7e-66 255.4 173 69.9
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 6.1e-66 255.0 174 68.4
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 1.4e-65 253.8 175 66.9
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 1.4e-65 253.8 231 57.1
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 2.3e-65 253.1 185 65.4
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 3.0e-65 252.7 194 62.9
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 6.8e-65 251.5 166 72.9
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.8e-65 251.1 190 65.3
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 8.8e-65 251.1 152 72.4
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 2.6e-64 249.6 183 63.4
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 2.6e-64 249.6 187 63.6
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 2.6e-64 249.6 184 62.5
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 3.4e-64 249.2 176 64.8
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 4.4e-64 248.8 151 73.5
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.7e-64 248.4 154 73.4
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 7.5e-64 248.1 151 73.5
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.8e-63 246.1 192 63.0
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 3.7e-63 245.7 160 70.6
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.9e-63 245.4 192 62.5
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.9e-63 245.4 192 62.5
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 8.3e-63 244.6 154 71.4
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-62 244.2 157 68.8
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.8e-62 243.4 192 62.5
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.4e-62 243.0 157 70.7
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 7.0e-62 241.5 157 70.1
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.0e-60 237.7 157 70.1
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 2.5e-59 233.0 221 54.3
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 2.4e-54 216.5 154 60.4
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.2e-53 214.2 142 69.7
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.3e-51 204.9 150 61.3
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 8.9e-49 198.0 157 59.9
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.2e-48 197.6 157 57.3
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 4.4e-48 195.7 139 66.9
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 7.5e-48 194.9 134 64.9
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.3e-47 191.4 122 70.5
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 5.4e-46 188.7 116 75.9
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.2e-45 187.6 115 74.8
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.7e-44 183.7 151 55.0
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.1e-41 174.5 117 70.9
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 2.2e-39 166.8 121 68.6
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 9.2e-38 161.4 155 51.6
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.1e-37 160.2 156 51.3
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.7e-37 159.8 156 50.6
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.5e-37 159.5 156 51.3
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 6.0e-37 158.7 172 48.3
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 8.6e-36 154.8 156 49.4
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.8e-34 149.8 158 44.9
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 8.1e-34 148.3 153 49.0
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 5.2e-33 145.6 93 71.0
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 9.2e-30 134.8 85 71.8
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.0e-28 131.3 159 42.1
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 6.2e-26 122.1 146 42.5
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 6.2e-26 122.1 146 42.5
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 8.1e-26 121.7 142 43.0
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 8.9e-25 118.2 70 72.9
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 2.3e-20 103.6 122 46.7


User provided reference genes

Program Settings