Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024863001 Vitis vinifera HOM05D005875 ORTHO05D007213 5.1e-37 157.1 75 100.0
Dinv34304 Davidia involucrata HOM05D005875 ORTHO05D007213 1.7e-35 152.1 75 96.0
Potri.009G037800 Populus trichocarpa HOM05D005875 ORTHO05D007213 3.7e-35 151.0 75 94.7
arahy.Tifrunner.gnm1.ann1.0PDV4E Arachis hypogaea HOM05D005875 ORTHO05D007213 4.8e-35 150.6 75 94.7
Ca_29565_v3 Cicer arietinum L. HOM05D005875 ORTHO05D007213 4.8e-35 150.6 75 94.7
Glyma.13G339300 Glycine max HOM05D005875 ORTHO05D007213 4.8e-35 150.6 75 94.7
Phvul.L008443 Phaseolus vulgaris HOM05D005875 ORTHO05D007213 4.8e-35 150.6 75 94.7
TPR.G23613 Trifolium pratense HOM05D005875 ORTHO05D007213 4.8e-35 150.6 75 94.7
Medtr4g064903 Medicago truncatula HOM05D005875 ORTHO05D007213 1.4e-34 149.1 75 93.3
Dinv43007 Davidia involucrata HOM05D005875 ORTHO05D007213 1.8e-34 148.7 75 94.7
Dinv43090 Davidia involucrata HOM05D005875 ORTHO05D007213 1.8e-34 148.7 75 94.7
Migut.F01279 Erythranthe guttata HOM05D005875 ORTHO05D007213 1.8e-34 148.7 75 94.7
Oeu017416.1 Olea europaea HOM05D005875 ORTHO05D007213 1.8e-34 148.7 75 94.7
Lalb_Chr19g0138001 Lupinus albus HOM05D005875 ORTHO05D007213 2.4e-34 148.3 75 93.3
Psat7g211880 Pisum sativum HOM05D005875 ORTHO05D007213 2.4e-34 148.3 75 93.3
CAN.G394.82 Capsicum annuum HOM05D005875 ORTHO05D007213 3.1e-34 147.9 75 93.3
Nitab4.5_0000839g0140 Nicotiana tabacum HOM05D005875 ORTHO05D007213 3.1e-34 147.9 75 93.3
Nitab4.5_0008156g0010 Nicotiana tabacum HOM05D005875 ORTHO05D007213 3.1e-34 147.9 75 93.3
Peaxi162Scf00481g00628 Petunia axillaris HOM05D005875 ORTHO05D007213 3.1e-34 147.9 75 93.3
Ah.08g220240 Amaranthus hybridus HOM05D005875 ORTHO05D007213 5.3e-34 147.1 75 92.0
ClCG03G001200 Citrullus lanatus HOM05D005875 ORTHO05D007213 6.9e-34 146.7 75 92.0
EL10Ac7g16086 Beta vulgaris HOM05D005875 ORTHO05D007213 1.2e-33 146.0 75 92.0
CANSAT54G1476 Cannabis sativa HOM05D005875 ORTHO05D007213 1.2e-33 146.0 75 92.0
CiPaw.13G087500 Carya illinoinensis HOM05D005875 ORTHO05D007213 1.2e-33 146.0 75 92.0
Glyma.15G035100 Glycine max HOM05D005875 ORTHO05D007213 1.2e-33 146.0 75 92.0
Manes.02G126800 Manihot esculenta HOM05D005875 ORTHO05D007213 1.2e-33 146.0 75 90.7
Actinidia08549 Actinidia chinensis HOM05D005875 ORTHO05D007213 1.5e-33 145.6 75 92.0
MD03G1084600 Malus domestica HOM05D005875 ORTHO05D007213 1.5e-33 145.6 75 90.7
QL01p028144 Quercus lobata HOM05D005875 ORTHO05D007213 1.5e-33 145.6 74 91.9
Sopen06g032870 Solanum pennellii HOM05D005875 ORTHO05D007213 1.5e-33 145.6 75 90.7
PGSC0003DMG400030334 Solanum tuberosum HOM05D005875 ORTHO05D007213 1.5e-33 145.6 75 90.7
vmacro03020 Vaccinium macrocarpon HOM05D005875 ORTHO05D007213 1.5e-33 145.6 75 92.0
Sc21g0006090 Simmondsia chinensis HOM05D005875 ORTHO05D007213 2.0e-33 145.2 75 92.0
CSS0002992 Camellia sinensis var. sinensis HOM05D005875 ORTHO05D007213 2.6e-33 144.8 75 90.7
Nn2g11283 Nelumbo nucifera HOM05D005875 ORTHO05D007213 2.6e-33 144.8 75 92.0
RcHm_v2.0_Chr5g0066881 Rosa chinensis HOM05D005875 ORTHO05D007213 2.6e-33 144.8 75 92.0
Atru.chr3.4025 Acer truncatum HOM05D005875 ORTHO05D007213 3.4e-33 144.4 75 90.7
Manes.01G167608 Manihot esculenta HOM05D005875 ORTHO05D007213 3.4e-33 144.4 75 90.7
SalBow2G0925 Salvia bowleyana HOM05D005875 ORTHO05D007213 3.4e-33 144.4 75 90.7
Sed0009265 Sechium edule HOM05D005875 ORTHO05D007213 3.4e-33 144.4 75 90.7
ECA248G0827 Erigeron canadensis HOM05D005875 ORTHO05D007213 4.5e-33 144.1 75 92.0
Lj3g0010434 Lotus japonicus HOM05D005875 ORTHO05D007213 7.7e-33 143.3 75 89.3
Prupe.6G067900 Prunus persica HOM05D005875 ORTHO05D007213 7.7e-33 143.3 75 90.7
Ciclev10029658m.g Citrus clementina HOM05D005875 ORTHO05D007213 1.0e-32 142.9 75 89.3
MD11G1092100 Malus domestica HOM05D005875 ORTHO05D007213 1.0e-32 142.9 75 90.7
Sed0004662 Sechium edule HOM05D005875 ORTHO05D007213 1.7e-32 142.1 75 89.3
Duzib168G0895 Durio zibethinus HOM05D005875 ORTHO05D007213 2.2e-32 141.7 75 89.3
Duzib168G1854 Durio zibethinus HOM05D005875 ORTHO05D007213 2.2e-32 141.7 75 89.3
arahy.Tifrunner.gnm1.ann1.L8JNUU Arachis hypogaea HOM05D005875 ORTHO05D007213 2.9e-32 141.4 88 80.7
Thecc.09G312900 Theobroma cacao HOM05D005875 ORTHO05D007213 2.9e-32 141.4 75 89.3
CDE09G0926 Ceratophyllum demersum HOM05D005875 ORTHO05D007213 5.0e-32 140.6 75 88.0
FvH4_3g37160 Fragaria vesca HOM05D005875 ORTHO05D007213 5.0e-32 140.6 75 90.7
FAN11G0304 Fragaria x ananassa HOM05D005875 ORTHO05D007213 5.0e-32 140.6 75 90.7
FAN16G0494 Fragaria x ananassa HOM05D005875 ORTHO05D007213 5.0e-32 140.6 75 90.7
FAN21G1946 Fragaria x ananassa HOM05D005875 ORTHO05D007213 5.0e-32 140.6 75 90.7
Rhsim13G0076300 Rhododendron simsii HOM05D005875 ORTHO05D007213 5.0e-32 140.6 75 89.3
Duzib170G0534 Durio zibethinus HOM05D005875 ORTHO05D007213 6.5e-32 140.2 75 88.0
Gohir.A13G225700 Gossypium hirsutum HOM05D005875 ORTHO05D007213 6.5e-32 140.2 75 88.0
Gohir.D13G231100 Gossypium hirsutum HOM05D005875 ORTHO05D007213 6.5e-32 140.2 75 88.0
Gorai.013G261600 Gossypium raimondii HOM05D005875 ORTHO05D007213 6.5e-32 140.2 75 88.0
TWI79G0668 Tripterygium wilfordii HOM05D005875 ORTHO05D007213 6.5e-32 140.2 75 86.7
unitig_60.g25692 Utricularia gibba HOM05D005875 ORTHO05D007213 6.5e-32 140.2 75 88.0
Aqoxy1G00802 Aquilegia oxysepala HOM05D005875 ORTHO05D007213 8.5e-32 139.8 75 89.3
PGR031G3365 Punica granatum HOM05D005875 ORTHO05D007213 8.5e-32 139.8 75 89.3
HPP92_019857 Vanilla planifolia HOM05D005875 ORTHO05D007213 1.1e-31 139.4 75 86.7
FAN25G1682 Fragaria x ananassa HOM05D005875 ORTHO05D007213 1.9e-31 138.7 75 89.3
Duzib150G0367 Durio zibethinus HOM05D005875 ORTHO05D007213 2.5e-31 138.3 75 86.7
Cc01_g13510 Coffea canephora HOM05D005875 ORTHO05D007213 4.2e-31 137.5 75 86.7
CDE02G2526 Ceratophyllum demersum HOM05D005875 ORTHO05D007213 7.2e-31 136.7 75 85.3
Hma1.2p1_0543F.1_g175400 Hydrangea macrophylla HOM05D005875 ORTHO05D007213 7.2e-31 136.7 82 82.9
PSO017G5786 Papaver somniferum HOM05D005875 ORTHO05D007213 1.2e-30 136.0 75 85.3
PSO478G4319 Papaver somniferum HOM05D005875 ORTHO05D007213 1.2e-30 136.0 75 85.3
THA.LOC109115974 Tarenaya hassleriana HOM05D005875 ORTHO05D007213 2.7e-30 134.8 75 85.3
A10p16360 Brassica napus HOM05D005875 ORTHO05D007213 1.4e-29 132.5 75 82.7
BraA10t43722Z Brassica rapa HOM05D005875 ORTHO05D007213 1.4e-29 132.5 75 82.7
AL8G35550 Arabidopsis lyrata HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
AT5G59140 Arabidopsis thaliana HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
BcaB01g04606 Brassica carinata HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
BcaB01g04618 Brassica carinata HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
BcaC04g19811 Brassica carinata HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
A03p11880 Brassica napus HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
C03p13940 Brassica napus HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
C09p51420 Brassica napus HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
BolC3t13842H Brassica oleracea HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
BolC9t58002H Brassica oleracea HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
BraA03t10499Z Brassica rapa HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
Thhalv10015122m.g Eutrema salsugineum HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
Sp6g20850 Schrenkiella parvula HOM05D005875 ORTHO05D007213 1.8e-29 132.1 75 82.7
THA.LOC104799420 Tarenaya hassleriana HOM05D005875 ORTHO05D007213 3.0e-29 131.3 75 84.0
Aa31LG1G12030 Aethionema arabicum HOM05D005875 ORTHO05D007213 3.9e-29 131.0 75 82.7
Gorai.003G127900 Gossypium raimondii HOM05D005875 ORTHO05D007213 3.9e-29 131.0 75 81.3
BcaB08g36282 Brassica carinata HOM05D005875 ORTHO05D007213 5.1e-29 130.6 75 81.3
Mapoly0001s0456 Marchantia polymorpha HOM05D005875 ORTHO05D007213 6.7e-29 130.2 75 81.3
SMO137G0055 Selaginella moellendorffii HOM05D005875 ORTHO05D007213 1.5e-28 129.0 75 80.0
Carub.0008s1981 Capsella rubella HOM05D005875 ORTHO05D007213 3.3e-28 127.9 75 80.0
ATR0210G023 Amborella trichopoda HOM05D005875 ORTHO05D007213 5.7e-28 127.1 74 79.7
Pp3c1_40610 Physcomitrium patens HOM05D005875 ORTHO05D007213 1.3e-27 125.9 75 77.3
SEGI_34558 Sequoiadendron giganteum HOM05D005875 ORTHO05D007213 1.3e-27 125.9 75 77.3
TAR369G0127 Trochodendron aralioides HOM05D005875 ORTHO05D007213 4.8e-27 124.0 75 78.7
CSS0010627 Camellia sinensis var. sinensis HOM05D005875 ORTHO05D007213 6.3e-27 123.6 64 89.1
Eucgr.A01573 Eucalyptus grandis HOM05D005875 ORTHO05D007213 1.1e-26 122.9 118 58.5
AagrBONN_evm.TU.Sc2ySwM_117.1366 Anthoceros agrestis HOM05D005875 ORTHO05D007213 1.4e-26 122.5 75 76.0
Oeu002453.3 Olea europaea HOM05D005875 ORTHO05D007213 1.8e-26 122.1 128 54.7
Os11g0707700 Oryza sativa ssp. japonica HOM05D005875 ORTHO05D007213 1.8e-26 122.1 76 77.6
MELO3C020599.2 Cucumis melo HOM05D005875 ORTHO05D007213 5.3e-26 120.6 62 88.7
SGA_v2.0_scaffold104G30156 Striga asiatica HOM05D005875 ORTHO05D007213 9.1e-26 119.8 61 91.8
Pp3c17_23040 Physcomitrium patens HOM05D005875 ORTHO05D007213 1.3e-24 115.9 75 70.7
AL48U10050 Arabidopsis lyrata HOM05D005875 ORTHO05D007213 6.1e-22 107.1 60 81.7
Gohir.D03G120951 Gossypium hirsutum HOM05D005875 ORTHO05D007213 5.2e-21 104.0 75 70.7
Ca_20611_v3 Cicer arietinum L. HOM05D005875 ORTHO05D007213 2.8e-19 98.2 48 93.8
MBI14_g02873_MAGBIO Magnolia biondii HOM05D005875 ORTHO05D007213 6.3e-19 97.1 52 86.5
Solyc06g076460.4 Solanum lycopersicum HOM05D005875 ORTHO05D007213 8.2e-19 96.7 48 91.7
HanXRQChr11g0340611 Helianthus annuus HOM05D005875 ORTHO05D007213 1.1e-18 96.3 49 91.8
Lsat_1_v5_gn_5_169860 Lactuca sativa HOM05D005875 ORTHO05D007213 1.1e-18 96.3 54 83.3
VMungo1080G0472 Vigna mungo HOM05D005875 ORTHO05D007213 1.1e-18 96.3 48 91.7
CBR_g20299 Chara braunii HOM05D005875 ORTHO05D007213 1.8e-18 95.5 76 60.5
Cre01.g061442 Chlamydomonas reinhardtii HOM05D005875 ORTHO05D007213 2.4e-18 95.1 77 61.0
Hund04909 Selenicereus undatus HOM05D005875 ORTHO05D007213 3.1e-18 94.7 48 89.6
DCAR_005929 Daucus carota HOM05D005875 ORTHO05D007213 4.1e-18 94.4 49 87.8
Haze_24201 Corylus avellana HOM05D005875 ORTHO05D007213 2.6e-17 91.7 48 87.5
MCO15G569 Micromonas commoda HOM05D005875 ORTHO05D007213 1.3e-16 89.4 73 54.8
Gohir.A03G046200 Gossypium hirsutum HOM05D005875 ORTHO05D007213 1.1e-15 86.3 49 81.6
CsaV3_1G035700 Cucumis sativus L. HOM05D005875 ORTHO05D007213 1.5e-15 85.9 45 86.7
CARHR285400 Cardamine hirsuta HOM05D005875 ORTHO05D007213 5.5e-15 84.0 48 77.1
AUR62041948 Chenopodium quinoa HOM05D005875 ORTHO05D007213 5.5e-15 84.0 50 76.0
PRCOL_00005420 Prasinoderma coloniale HOM05D005875 ORTHO05D007213 1.2e-14 82.8 74 52.7
AUR62028437 Chenopodium quinoa HOM05D005875 ORTHO05D007213 2.7e-14 81.6 48 77.1
Zm00001eb371730 Zea mays HOM05D005875 ORTHO05D007213 3.6e-14 81.3 49 73.5
arahy.Tifrunner.gnm1.ann1.M3Y99M Arachis hypogaea HOM05D005875 ORTHO05D007213 1.0e-13 79.7 56 73.2
arahy.Tifrunner.gnm1.ann1.02RT51 Arachis hypogaea HOM05D005875 ORTHO05D007213 6.3e-11 70.5 38 89.5
Haze_27721 Corylus avellana HOM05D005875 ORTHO05D007213 6.3e-11 70.5 75 48.0
Actinidia12881 Actinidia chinensis HOM05D005875 ORTHO05D007213 1.6e-09 65.9 67 56.7


User provided reference genes

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