Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 2.5e-101 372.1 188 100.0
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 3.2e-64 248.8 182 69.8
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 6.1e-63 244.6 182 69.8
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 9.8e-61 237.3 184 65.2
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 1.3e-60 236.9 183 67.8
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 3.7e-60 235.3 183 66.1
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 1.8e-59 233.0 184 65.8
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 2.7e-58 229.2 184 63.6
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 4.5e-58 228.4 182 64.3
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.5e-56 222.6 189 62.4
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 3.3e-56 222.2 183 61.7
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 4.7e-55 218.4 188 60.6
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.0e-54 217.2 180 62.8
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 4.0e-54 215.3 189 59.3
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 4.9e-52 208.4 190 58.4
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.1e-51 207.2 185 63.2
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.4e-51 206.8 182 59.3
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 4.1e-51 205.3 175 62.3
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 4.1e-51 205.3 188 56.4
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.2e-50 203.8 181 60.2
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.2e-50 203.8 183 58.5
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.2e-50 203.8 184 59.2
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 2.0e-50 203.0 190 59.5
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 1.1e-48 197.2 190 57.4
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 9.5e-48 194.1 186 58.1
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.2e-47 193.7 183 57.9
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.6e-47 193.4 185 56.2
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 2.1e-47 193.0 200 53.0
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.4e-46 190.3 188 54.8
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 4.0e-46 188.7 187 57.2
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 5.2e-46 188.3 176 55.1
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 8.9e-46 187.6 181 53.6
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.5e-45 186.8 158 62.7
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.0e-45 186.4 158 62.7
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.4e-45 185.7 188 53.2
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 5.8e-45 184.9 180 56.1
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 4.9e-44 181.8 183 52.5
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 8.3e-44 181.0 186 55.4
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 8.3e-44 181.0 179 54.2
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.9e-43 179.9 185 54.6
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.9e-43 179.9 183 53.0
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 3.2e-43 179.1 185 51.9
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 7.0e-43 177.9 183 53.0
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 9.2e-43 177.6 183 52.5
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.6e-42 176.8 183 54.6
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 1.0e-41 174.1 183 51.4
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 1.7e-41 173.3 184 53.3
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 1.7e-41 173.3 108 75.9
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 2.3e-41 172.9 185 51.9
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.3e-41 172.9 158 59.5
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 3.9e-41 172.2 188 53.2
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 5.0e-41 171.8 109 75.2
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 8.6e-41 171.0 111 73.9
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 4.3e-40 168.7 187 53.5
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 5.6e-40 168.3 113 72.6
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 7.3e-40 167.9 186 48.9
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 1.6e-39 166.8 182 52.2
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.8e-39 166.0 189 52.4
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 2.8e-39 166.0 116 69.8
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 5.2e-38 161.8 110 71.8
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 4.4e-37 158.7 191 46.6
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.7e-36 156.8 110 66.4
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 1.7e-36 156.8 174 48.3
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 3.7e-36 155.6 179 52.0
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 4.9e-36 155.2 172 49.4
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.1e-35 154.1 252 38.9
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 3.2e-35 152.5 199 45.2
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 4.1e-35 152.1 183 45.4
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.2e-34 150.6 128 62.5
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.2e-34 150.6 128 62.5
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 4.6e-34 148.7 90 76.7
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 4.6e-34 148.7 104 70.2
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 3.0e-33 146.0 113 63.7
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 5.1e-33 145.2 113 67.3
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 6.6e-33 144.8 118 64.4
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.1e-32 144.1 196 46.9
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.5e-32 143.7 120 61.7
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.5e-32 143.7 116 62.9
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 1.5e-32 143.7 108 65.7
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 7.3e-32 141.4 108 65.7
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 7.3e-32 141.4 106 66.0
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 9.5e-32 141.0 111 60.4
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.2e-31 140.6 195 44.6
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 1.2e-31 140.6 253 36.4
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.2e-31 140.6 206 42.2
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.2e-31 140.6 197 48.2
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 6.2e-31 138.3 206 40.3
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.1e-30 136.0 193 42.5
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 4.0e-30 135.6 201 43.3
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 6.8e-30 134.8 110 64.5
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.6e-29 132.9 201 43.8
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 7.6e-29 131.3 208 43.8
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.3e-28 130.6 199 40.7
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 2.2e-28 129.8 169 46.7
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 2.9e-28 129.4 202 44.1
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 4.9e-28 128.6 190 41.1
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 6.4e-28 128.3 192 41.7
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 6.4e-28 128.3 212 40.1
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 6.4e-28 128.3 202 43.6
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 6.4e-28 128.3 113 59.3
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 8.4e-28 127.9 198 42.9
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 1.1e-27 127.5 113 59.3
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-27 127.1 190 42.6
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 1.9e-27 126.7 190 42.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 2.4e-27 126.3 197 41.6
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 4.1e-27 125.6 143 49.7
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 7.1e-27 124.8 208 43.3
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 9.2e-27 124.4 106 62.3
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 1.2e-26 124.0 197 41.1
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 2.1e-26 123.2 209 39.7
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 3.9e-25 119.0 214 38.8
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.1e-24 117.5 86 65.1
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 7.3e-24 114.8 184 38.0
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 4.7e-23 112.1 184 38.6
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 4.7e-23 112.1 183 37.7
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 4.7e-23 112.1 102 53.9
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.4e-22 109.8 185 37.3
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 2.4e-22 109.8 190 38.9
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 5.8e-21 105.1 67 71.6
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.3e-20 104.0 81 63.0
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 2.9e-20 102.8 177 37.3
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 2.4e-19 99.8 242 31.8
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.0e-17 94.4 68 61.8
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 3.9e-17 92.4 134 40.3
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 3.9e-17 92.4 134 40.3
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.1e-16 90.9 114 39.5
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.5e-16 90.5 196 36.7
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 1.3e-15 87.4 174 33.9
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.6e-15 87.0 73 54.8
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.6e-15 87.0 73 54.8
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 2.1e-15 86.7 174 32.2
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.2e-11 72.4 166 36.7
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.9e-08 63.5 60 43.3


User provided reference genes

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