Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024430001 Vitis vinifera HOM05D000577 ORTHO05D003509 1.1e-68 263.1 129 100.0
GSVIVG01018943001 Vitis vinifera HOM05D000577 ORTHO05D003509 8.2e-51 203.8 128 80.5
Dinv13516 Davidia involucrata HOM05D000577 ORTHO05D003509 1.4e-26 123.2 128 57.0
CiPaw.02G018600 Carya illinoinensis HOM05D000577 ORTHO05D003509 3.1e-26 122.1 128 53.1
QL06p046457 Quercus lobata HOM05D000577 ORTHO05D003509 5.9e-25 117.9 128 50.8
Cfa004320 Carpinus fangiana HOM05D000577 ORTHO05D003509 7.8e-25 117.5 128 52.3
Cfa004321 Carpinus fangiana HOM05D000577 ORTHO05D003509 1.7e-24 116.3 128 52.3
Atru.chr3.597_Atru.chr3.598 Acer truncatum HOM05D000577 ORTHO05D003509 2.3e-24 115.9 128 56.2
Potri.005G122100 Populus trichocarpa HOM05D000577 ORTHO05D003509 2.3e-24 115.9 128 50.8
Cfa004319 Carpinus fangiana HOM05D000577 ORTHO05D003509 1.6e-22 109.8 128 51.6
Manes.01G136300 Manihot esculenta HOM05D000577 ORTHO05D003509 2.1e-22 109.4 129 47.3
Potri.007G023700 Populus trichocarpa HOM05D000577 ORTHO05D003509 1.0e-21 107.1 128 47.7
Prupe.7G156200 Prunus persica HOM05D000577 ORTHO05D003509 1.4e-21 106.7 127 48.8
MD15G1259700 Malus domestica HOM05D000577 ORTHO05D003509 2.3e-21 105.9 128 51.6
CSS0047474 Camellia sinensis var. sinensis HOM05D000577 ORTHO05D003509 3.0e-21 105.5 128 49.2
Sabra07G0020600 Salix brachista HOM05D000577 ORTHO05D003509 5.2e-21 104.8 128 47.7
Lalb_Chr09g0322281 Lupinus albus HOM05D000577 ORTHO05D003509 5.7e-20 101.3 127 46.5
Manes.02G095000 Manihot esculenta HOM05D000577 ORTHO05D003509 5.7e-20 101.3 129 45.0
TAR101G0005 Trochodendron aralioides HOM05D000577 ORTHO05D003509 1.3e-19 100.1 128 43.8
arahy.Tifrunner.gnm1.ann1.AS7PIZ Arachis hypogaea HOM05D000577 ORTHO05D003509 6.4e-19 97.8 128 43.8
Thecc.01G033700 Theobroma cacao HOM05D000577 ORTHO05D003509 8.3e-19 97.4 128 43.0
MD02G1145600 Malus domestica HOM05D000577 ORTHO05D003509 1.1e-18 97.1 128 46.1
Ca_22318_v3 Cicer arietinum L. HOM05D000577 ORTHO05D003509 1.4e-18 96.7 128 45.3
Glyma.01G173800 Glycine max HOM05D000577 ORTHO05D003509 2.4e-18 95.9 127 40.2
Lj4g0013096 Lotus japonicus HOM05D000577 ORTHO05D003509 2.4e-18 95.9 128 49.2
RcHm_v2.0_Chr2g0101271 Rosa chinensis HOM05D000577 ORTHO05D003509 3.2e-18 95.5 127 45.7
RcHm_v2.0_Chr2g0104731 Rosa chinensis HOM05D000577 ORTHO05D003509 3.2e-18 95.5 127 45.7
CiPaw.01G043100 Carya illinoinensis HOM05D000577 ORTHO05D003509 4.1e-18 95.1 128 45.3
Glyma.11G069300 Glycine max HOM05D000577 ORTHO05D003509 4.1e-18 95.1 127 39.4
TPR.G24095 Trifolium pratense HOM05D000577 ORTHO05D003509 4.1e-18 95.1 129 47.3
arahy.Tifrunner.gnm1.ann1.HT20TT Arachis hypogaea HOM05D000577 ORTHO05D003509 1.2e-17 93.6 127 42.5
CiPaw.01G040700 Carya illinoinensis HOM05D000577 ORTHO05D003509 1.2e-17 93.6 135 44.4
Ca_24857_v3 Cicer arietinum L. HOM05D000577 ORTHO05D003509 2.7e-17 92.4 127 42.5
Lj2g0000390 Lotus japonicus HOM05D000577 ORTHO05D003509 2.7e-17 92.4 129 45.0
Ciclev10024987m.g Citrus clementina HOM05D000577 ORTHO05D003509 3.5e-17 92.0 128 46.9
TWI53G0198 Tripterygium wilfordii HOM05D000577 ORTHO05D003509 3.5e-17 92.0 128 46.1
TAR381G0749 Trochodendron aralioides HOM05D000577 ORTHO05D003509 3.5e-17 92.0 128 43.8
Gohir.A02G166300 Gossypium hirsutum HOM05D000577 ORTHO05D003509 5.9e-17 91.3 126 42.9
FvH4_1g13090 Fragaria vesca HOM05D000577 ORTHO05D003509 1.0e-16 90.5 127 43.3
Glyma.02G055500 Glycine max HOM05D000577 ORTHO05D003509 1.3e-16 90.1 126 43.7
Gorai.003G014000 Gossypium raimondii HOM05D000577 ORTHO05D003509 1.3e-16 90.1 126 42.9
FAN23G0011 Fragaria x ananassa HOM05D000577 ORTHO05D003509 2.3e-16 89.4 127 43.3
Psat4g094200 Pisum sativum HOM05D000577 ORTHO05D003509 3.0e-16 89.0 129 47.3
Glyma.16G138300 Glycine max HOM05D000577 ORTHO05D003509 3.9e-16 88.6 126 42.9
Actinidia16031 Actinidia chinensis HOM05D000577 ORTHO05D003509 5.0e-16 88.2 128 43.0
Medtr5g020570 Medicago truncatula HOM05D000577 ORTHO05D003509 5.0e-16 88.2 128 42.2
CANSAT01G1642 Cannabis sativa HOM05D000577 ORTHO05D003509 6.6e-16 87.8 128 41.4
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 6.6e-16 87.8 127 42.5
FAN19G0811 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.1e-15 87.0 127 44.1
Medtr8g077205 Medicago truncatula HOM05D000577 ORTHO05D003509 1.1e-15 87.0 128 43.0
Oeu016308.1 Olea europaea HOM05D000577 ORTHO05D003509 1.1e-15 87.0 128 38.3
Duzib264G0013 Durio zibethinus HOM05D000577 ORTHO05D003509 1.5e-15 86.7 128 42.2
Gohir.D10G092500 Gossypium hirsutum HOM05D000577 ORTHO05D003509 1.9e-15 86.3 128 43.0
Gohir.D11G189900 Gossypium hirsutum HOM05D000577 ORTHO05D003509 1.9e-15 86.3 127 40.2
Gorai.011G101500 Gossypium raimondii HOM05D000577 ORTHO05D003509 1.9e-15 86.3 128 43.0
QL06p046498 Quercus lobata HOM05D000577 ORTHO05D003509 1.9e-15 86.3 127 43.3
Gorai.007G202100 Gossypium raimondii HOM05D000577 ORTHO05D003509 2.5e-15 85.9 127 40.2
Psat2g158800 Pisum sativum HOM05D000577 ORTHO05D003509 2.5e-15 85.9 130 43.8
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 3.3e-15 85.5 127 43.3
VMungo0251G3526 Vigna mungo HOM05D000577 ORTHO05D003509 3.3e-15 85.5 126 42.9
Phvul.002G031400 Phaseolus vulgaris HOM05D000577 ORTHO05D003509 9.5e-15 84.0 127 40.2
Oeu023816.1 Olea europaea HOM05D000577 ORTHO05D003509 1.2e-14 83.6 128 37.5
VMungo1215G1450 Vigna mungo HOM05D000577 ORTHO05D003509 1.6e-14 83.2 127 39.4
Phvul.003G254600 Phaseolus vulgaris HOM05D000577 ORTHO05D003509 2.8e-14 82.4 126 42.9
COL.COLO4_22058 Corchorus olitorius HOM05D000577 ORTHO05D003509 3.6e-14 82.0 130 40.8
Dinv36095 Davidia involucrata HOM05D000577 ORTHO05D003509 3.6e-14 82.0 123 41.5
Gohir.A11G183400 Gossypium hirsutum HOM05D000577 ORTHO05D003509 1.1e-13 80.5 127 38.6
Nn1g04954 Nelumbo nucifera HOM05D000577 ORTHO05D003509 1.1e-13 80.5 129 39.5
Duzib147G1620 Durio zibethinus HOM05D000577 ORTHO05D003509 1.4e-13 80.1 128 40.6
Gohir.A10G095500 Gossypium hirsutum HOM05D000577 ORTHO05D003509 1.4e-13 80.1 128 40.6
Hma1.2p1_0789F.1_g218320 Hydrangea macrophylla HOM05D000577 ORTHO05D003509 1.4e-13 80.1 128 42.2
Eucgr.H03314 Eucalyptus grandis HOM05D000577 ORTHO05D003509 2.3e-13 79.3 129 38.0
TPR.G21429 Trifolium pratense HOM05D000577 ORTHO05D003509 2.3e-13 79.3 130 40.8
EL10Ac6g15548 Beta vulgaris HOM05D000577 ORTHO05D003509 3.4e-12 75.5 128 35.9
Peaxi162Scf00366g00041 Petunia axillaris HOM05D000577 ORTHO05D003509 3.4e-12 75.5 123 36.6
Cpa.g.sc6.129 Carica papaya HOM05D000577 ORTHO05D003509 1.3e-11 73.6 128 40.6
Sc16g0002700 Simmondsia chinensis HOM05D000577 ORTHO05D003509 1.3e-11 73.6 128 36.7
Peaxi162Scf00751g00005 Petunia axillaris HOM05D000577 ORTHO05D003509 4.9e-11 71.6 128 36.7
GSVIVG01030339001 Vitis vinifera HOM05D000577 ORTHO05D438311 4.9e-11 71.6 49 73.5
Nn5g29638 Nelumbo nucifera HOM05D000577 ORTHO05D003509 8.3e-11 70.9 129 36.4
Ciclev10000389m.g Citrus clementina HOM05D000577 ORTHO05D003509 1.1e-10 70.5 128 39.1
AUR62004065 Chenopodium quinoa HOM05D000577 ORTHO05D003509 1.9e-10 69.7 127 34.6
Thecc.04G103400 Theobroma cacao HOM05D000041 ORTHO05D004120 2.4e-10 69.3 105 43.8
DCAR_025949 Daucus carota HOM05D000577 ORTHO05D003509 3.2e-10 68.9 128 35.2
Gohir.D03G013700 Gossypium hirsutum HOM05D000577 ORTHO05D003509 5.4e-10 68.2 123 35.0
Hund13985 Selenicereus undatus HOM05D000577 ORTHO05D003509 7.0e-10 67.8 128 35.2
Lj4C203T2 Lonicera japonica HOM05D000577 ORTHO05D003509 9.2e-10 67.4 128 38.3
PGR102G1530 Punica granatum HOM05D000577 ORTHO05D003509 1.2e-09 67.0 128 34.4
PGR102G2210 Punica granatum HOM05D000577 ORTHO05D003509 1.2e-09 67.0 128 34.4
THA.LOC104807457 Tarenaya hassleriana HOM05D000577 ORTHO05D003509 2.7e-09 65.9 114 33.3
CAN.G358.69 Capsicum annuum HOM05D000577 ORTHO05D003509 3.5e-09 65.5 128 33.6
CSS0029768 Camellia sinensis var. sinensis HOM05D000577 ORTHO05D003509 6.0e-09 64.7 123 36.6
Hund16437 Selenicereus undatus HOM05D000577 ORTHO05D003509 7.8e-09 64.3 128 34.4
Duzib093G0364 Durio zibethinus HOM05D000577 ORTHO05D003509 1.0e-08 63.9 130 33.8
Duzib116G0416 Durio zibethinus HOM05D000577 ORTHO05D003509 1.3e-08 63.5 130 33.8
Nitab4.5_0000178g0110 Nicotiana tabacum HOM05D000577 ORTHO05D003509 1.7e-08 63.2 128 33.6
AUR62007578 Chenopodium quinoa HOM05D000577 ORTHO05D003509 2.3e-08 62.8 127 32.3
Ah.03g140990 Amaranthus hybridus HOM05D000577 ORTHO05D003509 3.9e-08 62.0 129 32.6
MBI10_g18260_MAGBIO Magnolia biondii HOM05D000577 ORTHO05D003509 3.9e-08 62.0 126 38.1
Atru.chr13.451 Acer truncatum HOM05D000577 ORTHO05D003509 6.6e-08 61.2 80 45.0
Actinidia22534 Actinidia chinensis HOM05D000577 ORTHO05D003509 6.6e-08 61.2 123 30.1
Solyc02g085140.4 Solanum lycopersicum HOM05D000577 ORTHO05D003509 6.6e-08 61.2 128 34.4
PGSC0003DMG400003511 Solanum tuberosum HOM05D000577 ORTHO05D003509 1.1e-07 60.5 128 34.4
Actinidia15338 Actinidia chinensis HOM05D000577 ORTHO05D003509 1.9e-07 59.7 70 41.4
CAN.G568.6 Capsicum annuum HOM05D000577 ORTHO05D003509 2.5e-07 59.3 123 34.1
Eucgr.I02430 Eucalyptus grandis HOM05D000577 ORTHO05D003509 2.5e-07 59.3 124 34.7
GSVIVG01009724001 Vitis vinifera HOM05D000577 ORTHO05D003509 2.5e-07 59.3 128 32.8
Ah.02g125120 Amaranthus hybridus HOM05D000577 ORTHO05D003509 3.3e-07 58.9 129 31.0
Sopen02g029830 Solanum pennellii HOM05D000577 ORTHO05D003509 3.3e-07 58.9 128 33.6
Nitab4.5_0001575g0050 Nicotiana tabacum HOM05D000577 ORTHO05D003509 5.6e-07 58.2 123 31.7
Nitab4.5_0007538g0010 Nicotiana tabacum HOM05D000577 ORTHO05D003509 9.5e-07 57.4 123 30.9
ClCG07G008520 Citrullus lanatus HOM05D000577 ORTHO05D003509 3.6e-06 55.5 132 33.3
Lsat_1_v5_gn_4_117460 Lactuca sativa HOM05D000577 ORTHO05D003509 3.6e-06 55.5 104 29.8
BraA01t00221Z Brassica rapa HOM05D000577 ORTHO05D003509 4.7e-06 55.1 74 33.8


User provided reference genes

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