Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024388001 Vitis vinifera HOM05D000081 ORTHO05D440184 3.0e-28 127.9 67 100.0
Ciclev10021174m.g Citrus clementina HOM05D000081 ORTHO05D000036 1.3e-07 59.3 36 88.9
Glyma.10G011300 Glycine max HOM05D000081 ORTHO05D000036 2.9e-07 58.2 56 64.3
Manes.01G230000 Manihot esculenta HOM05D000081 ORTHO05D000036 2.9e-07 58.2 92 47.8
QL12p019034 Quercus lobata HOM05D000081 ORTHO05D000036 2.9e-07 58.2 56 64.3
Duzib138G0260 Durio zibethinus HOM05D000081 ORTHO05D000036 3.8e-07 57.8 90 48.9
Glyma.02G010900 Glycine max HOM05D000081 ORTHO05D000036 3.8e-07 57.8 54 64.8
Phvul.007G212900 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 3.8e-07 57.8 54 64.8
Potri.002G193000 Populus trichocarpa HOM05D000081 ORTHO05D000036 3.8e-07 57.8 93 47.3
VMungo0720G1382 Vigna mungo HOM05D000081 ORTHO05D000036 3.8e-07 57.8 54 64.8
Potri.014G118200 Populus trichocarpa HOM05D000081 ORTHO05D000036 4.9e-07 57.4 93 47.3
Sabra14G0087700 Salix brachista HOM05D000081 ORTHO05D000036 4.9e-07 57.4 93 47.3
Sabra02G0162900 Salix brachista HOM05D000081 ORTHO05D000036 6.5e-07 57.0 61 60.7
Oeu038039.1 Olea europaea HOM05D000081 ORTHO05D000036 8.4e-07 56.6 56 64.3
Thecc.01G316600 Theobroma cacao HOM05D000081 ORTHO05D000036 8.4e-07 56.6 54 63.0
Gorai.007G121200 Gossypium raimondii HOM05D000081 ORTHO05D000036 1.1e-06 56.2 90 47.8
Manes.05G013500 Manihot esculenta HOM05D000081 ORTHO05D000036 1.1e-06 56.2 52 65.4
PGSC0003DMG400009051 Solanum tuberosum HOM05D000081 ORTHO05D000036 1.4e-06 55.8 58 56.9
TWI73G0399 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 1.4e-06 55.8 36 83.3
Lj5g0015343 Lotus japonicus HOM05D000081 ORTHO05D000036 1.9e-06 55.5 58 60.3
Prupe.3G008600 Prunus persica HOM05D000081 ORTHO05D000036 1.9e-06 55.5 56 64.3
MD17G1278100 Malus domestica HOM05D000081 ORTHO05D000036 3.2e-06 54.7 54 64.8
Cfa005763 Carpinus fangiana HOM05D000081 ORTHO05D000036 4.2e-06 54.3 51 64.7
Gohir.A11G108200 Gossypium hirsutum HOM05D000081 ORTHO05D000036 4.2e-06 54.3 51 64.7
Gohir.D11G112700 Gossypium hirsutum HOM05D000081 ORTHO05D000036 4.2e-06 54.3 51 64.7
Nitab4.5_0008014g0010 Nicotiana tabacum HOM05D000081 ORTHO05D000036 4.2e-06 54.3 56 60.7
TPR.G4100 Trifolium pratense HOM05D000081 ORTHO05D000036 4.2e-06 54.3 58 56.9
arahy.Tifrunner.gnm1.ann1.GQZA4M Arachis hypogaea HOM05D000081 ORTHO05D000036 5.5e-06 53.9 53 64.2
Glyma.03G220800 Glycine max HOM05D000081 ORTHO05D000036 5.5e-06 53.9 61 57.4
Glyma.19G217800 Glycine max HOM05D000081 ORTHO05D000036 5.5e-06 53.9 61 57.4
Solyc01g079260.4 Solanum lycopersicum HOM05D000081 ORTHO05D000036 5.5e-06 53.9 58 55.2
Sopen01g031040 Solanum pennellii HOM05D000081 ORTHO05D000036 5.5e-06 53.9 58 55.2
Dinv10121 Davidia involucrata HOM05D000081 ORTHO05D000036 7.1e-06 53.5 52 61.5
Phvul.001G214400 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 7.1e-06 53.5 58 58.6
TWI36G0555 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 7.1e-06 53.5 56 60.7
VMungo1383G1612 Vigna mungo HOM05D000081 ORTHO05D000036 7.1e-06 53.5 58 58.6
CAN.G293.11 Capsicum annuum HOM05D000081 ORTHO05D000036 9.3e-06 53.1 58 55.2
Cpa.g.sc18.82 Carica papaya HOM05D000081 ORTHO05D000036 9.3e-06 53.1 53 62.3
CiPaw.07G119500 Carya illinoinensis HOM05D000081 ORTHO05D000036 9.3e-06 53.1 74 52.7
TAR362G1015 Trochodendron aralioides HOM05D000081 ORTHO05D000036 9.3e-06 53.1 89 47.2


User provided reference genes

Program Settings