Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 7.5e-118 427.2 211 100.0
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 1.9e-97 359.4 209 84.7
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 1.2e-96 356.7 209 82.3
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 5.2e-95 351.3 209 83.7
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 1.2e-94 350.1 191 88.0
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 2.0e-94 349.4 209 80.4
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 2.9e-93 345.5 205 80.5
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 3.7e-93 345.1 205 80.0
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 1.9e-92 342.8 209 79.4
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 4.1e-92 341.7 209 82.3
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 1.2e-91 340.1 211 80.1
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 3.5e-91 338.6 209 78.0
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 6.0e-91 337.8 209 78.5
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 6.0e-91 337.8 209 79.9
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 1.3e-90 336.7 209 78.9
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 1.7e-90 336.3 227 73.6
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 3.0e-90 335.5 209 77.0
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 8.6e-90 334.0 209 78.0
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 5.6e-89 331.3 209 77.0
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 9.5e-89 330.5 205 79.0
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 9.5e-89 330.5 209 76.6
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 4.7e-88 328.2 206 78.2
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 8.1e-88 327.4 209 77.0
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 8.1e-88 327.4 205 77.6
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 4.4e-86 321.6 207 75.4
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 2.2e-85 319.3 209 77.0
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 5.4e-84 314.7 206 72.8
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 7.1e-84 314.3 209 75.1
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 2.7e-83 312.4 209 71.8
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 6.0e-83 311.2 205 73.7
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 6.0e-83 311.2 205 73.7
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 7.8e-83 310.8 209 73.2
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 1.0e-82 310.5 209 71.8
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 1.3e-82 310.1 209 70.8
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 1.3e-82 310.1 209 73.7
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 2.3e-82 309.3 209 72.7
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 2.3e-82 309.3 209 71.3
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 3.0e-82 308.9 209 72.7
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 3.0e-82 308.9 209 72.7
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 3.0e-82 308.9 209 72.7
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 3.0e-82 308.9 207 74.4
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 6.6e-82 307.8 205 73.2
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 6.6e-82 307.8 210 70.0
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 1.5e-81 306.6 214 69.6
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 2.5e-81 305.8 205 72.7
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.5e-81 305.8 210 71.9
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.5e-81 305.8 210 71.9
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 2.5e-81 305.8 205 72.7
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 3.3e-81 305.4 209 71.8
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.3e-81 305.1 208 71.6
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 4.3e-81 305.1 209 71.8
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 7.3e-81 304.3 209 71.8
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.3e-81 304.3 210 71.4
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 7.3e-81 304.3 209 70.3
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 9.6e-81 303.9 205 72.2
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 9.6e-81 303.9 208 71.2
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 1.2e-80 303.5 207 73.4
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 1.6e-80 303.1 207 71.5
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 1.6e-80 303.1 210 71.0
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 1.6e-80 303.1 207 73.4
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.1e-80 302.8 205 72.2
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.7e-80 301.6 202 72.8
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 4.7e-80 301.6 210 71.0
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 1.1e-79 300.4 209 69.4
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 1.4e-79 300.1 208 72.6
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 1.8e-79 299.7 210 68.6
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 2.4e-79 299.3 207 72.0
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 4.0e-79 298.5 210 67.6
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 6.8e-79 297.7 215 68.8
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 6.8e-79 297.7 206 69.4
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 8.9e-79 297.4 210 70.5
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 7.6e-78 294.3 209 68.4
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 7.6e-78 294.3 181 79.6
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 1.3e-77 293.5 207 72.9
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 1.3e-77 293.5 207 72.9
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 1.3e-77 293.5 207 72.9
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 3.8e-77 292.0 206 68.0
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 6.4e-77 291.2 207 70.0
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 1.1e-76 290.4 209 68.9
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 1.1e-76 290.4 207 72.5
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 1.4e-76 290.0 196 70.4
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 2.4e-76 289.3 209 68.9
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 1.2e-75 287.0 209 68.4
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 1.2e-75 287.0 209 68.4
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 1.6e-75 286.6 209 68.4
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 4.6e-75 285.0 198 71.2
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 7.8e-75 284.3 209 67.9
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 1.3e-74 283.5 209 67.5
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 1.3e-74 283.5 193 69.9
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 6.6e-74 281.2 207 67.1
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 1.1e-73 280.4 231 64.5
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 1.1e-73 280.4 207 67.1
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 1.9e-73 279.6 209 67.0
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 2.5e-73 279.3 205 66.8
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 2.5e-73 279.3 209 66.5
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 1.3e-72 276.9 205 66.8
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 1.6e-72 276.6 209 66.5
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 6.9e-71 271.2 203 70.0
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 2.6e-70 269.2 202 62.9
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.3e-69 266.9 200 63.5
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 7.1e-68 261.2 190 67.4
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 1.6e-67 260.0 190 68.4
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 3.5e-67 258.8 207 65.7
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 4.6e-67 258.5 172 69.8
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 1.7e-66 256.5 211 60.2
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 7.3e-65 251.1 155 78.1
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 7.3e-65 251.1 185 64.3
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 1.4e-63 246.9 208 62.5
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 3.3e-57 225.7 144 72.9
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 2.8e-56 222.6 199 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 4.1e-47 192.2 177 52.0
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 5.3e-47 191.8 207 52.2
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 7.4e-41 171.4 130 70.0
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 2.8e-40 169.5 113 68.1
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 3.8e-37 159.1 186 42.5
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 7.4e-33 144.8 79 82.3
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 3.7e-32 142.5 167 45.5
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 4.7e-27 125.6 109 51.4
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 7.9e-27 124.8 63 87.3
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 3.0e-26 122.9 172 40.7
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 1.2e-22 110.9 105 54.3
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 1.1e-20 104.4 184 37.0
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 1.0e-18 97.8 50 86.0
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 6.7e-18 95.1 78 64.1
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 2.6e-17 93.2 88 63.6
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 1.0e-13 81.3 61 63.9
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 1.2e-11 74.3 55 65.5
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 2.7e-11 73.2 78 48.7
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 1.0e-10 71.2 83 48.2
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 5.2e-10 68.9 140 33.6
Dinv18752 Davidia involucrata HOM05D036176 ORTHO05D007177 3.4e-09 66.2 47 70.2
Actinidia29229 Actinidia chinensis HOM05D005838 ORTHO05D007177 5.4e-07 58.9 40 70.0
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 1.6e-06 57.4 41 65.9


User provided reference genes

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