Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 2.0e-242 842.0 440 100.0
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 7.8e-186 654.1 456 74.1
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 1.5e-181 639.8 445 73.0
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 3.0e-177 625.5 447 74.7
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 6.9e-174 614.4 446 72.4
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 3.8e-172 608.6 431 75.2
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 1.1e-171 607.1 451 69.6
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 2.7e-170 602.4 415 75.4
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 2.1e-167 592.8 528 62.1
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 4.8e-167 591.7 426 71.4
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 1.5e-157 560.1 446 67.0
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 7.9e-154 547.7 405 68.9
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 2.3e-153 546.2 443 65.5
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 3.9e-153 545.4 440 68.0
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 9.1e-150 534.3 441 67.6
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.5e-149 533.5 441 67.3
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 8.5e-148 527.7 378 73.8
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 6.1e-146 521.5 406 68.2
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 1.8e-145 520.0 453 60.5
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 1.5e-144 516.9 441 65.5
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 2.0e-144 516.5 396 66.7
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 2.9e-140 502.7 393 66.4
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 5.0e-140 501.9 378 71.7
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 1.1e-136 490.7 437 62.7
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.1e-136 490.7 395 64.8
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 2.2e-135 486.5 385 64.9
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 2.4e-134 483.0 442 59.7
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 4.1e-134 482.3 393 63.4
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 7.0e-134 481.5 400 63.5
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 8.0e-130 468.0 393 62.3
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 1.4e-129 467.2 427 56.0
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.4e-126 457.2 370 65.4
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 2.2e-124 449.9 400 62.8
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 5.7e-120 435.3 451 54.3
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 3.7e-119 432.6 394 58.1
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 8.3e-119 431.4 394 59.4
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 7.0e-118 428.3 392 59.4
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 1.9e-115 420.2 411 54.5
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 7.2e-115 418.3 421 57.2
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 3.9e-108 396.0 402 55.7
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 7.3e-107 391.7 357 59.9
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 6.1e-106 388.7 390 54.4
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 8.9e-105 384.8 312 66.0
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 1.1e-97 361.3 292 63.0
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 8.9e-97 358.2 391 50.4
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 4.4e-88 329.3 428 41.8
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 6.4e-79 298.9 315 52.4
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 1.6e-74 284.3 356 46.9
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 3.4e-64 250.0 261 52.9
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 8.4e-63 245.4 269 48.7
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 5.7e-43 179.5 194 52.1
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 4.2e-38 163.3 151 58.9
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 2.2e-31 141.0 100 71.0
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 2.7e-29 134.0 127 52.8
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.8e-25 121.3 133 54.9
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.1e-17 95.5 81 61.7
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 2.5e-14 84.3 62 71.0
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 2.3e-12 77.8 51 76.5
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 5.2e-12 76.6 152 39.5


User provided reference genes

Program Settings