Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 4.6e-183 644.4 323 100.0
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 1.8e-142 509.6 323 77.1
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 4.3e-141 505.0 324 74.4
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 2.4e-139 499.2 325 73.5
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.2e-138 496.9 323 72.1
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 1.5e-138 496.5 324 75.6
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 2.6e-138 495.7 323 72.8
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 7.6e-138 494.2 330 73.0
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.3e-137 493.4 323 74.0
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 5.5e-136 488.0 324 72.2
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 7.1e-136 487.6 323 72.4
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 9.3e-136 487.3 323 72.8
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.2e-135 486.9 323 72.1
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 2.1e-135 486.1 363 65.0
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 3.5e-135 485.3 323 74.0
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 7.9e-135 484.2 324 72.2
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 7.9e-135 484.2 324 75.0
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 1.8e-134 483.0 323 72.4
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 3.9e-134 481.9 325 71.7
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 1.5e-133 479.9 324 69.8
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 5.7e-133 478.0 326 69.9
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.6e-132 476.5 323 71.8
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 1.4e-131 473.4 323 70.0
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.8e-131 473.0 323 71.5
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.2e-130 470.3 306 73.2
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 2.6e-130 469.2 327 68.8
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 4.5e-130 468.4 323 70.6
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 1.0e-129 467.2 325 69.5
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 5.0e-129 464.9 323 68.1
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 1.4e-128 463.4 326 68.7
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 4.2e-128 461.8 323 69.7
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 2.1e-127 459.5 323 69.7
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 3.6e-127 458.8 323 67.8
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 4.6e-127 458.4 324 66.0
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 7.9e-127 457.6 324 69.1
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 1.8e-126 456.4 324 65.7
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 3.0e-126 455.7 323 65.9
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.9e-126 455.3 324 69.1
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 1.5e-125 453.4 324 68.2
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.5e-125 452.6 324 68.5
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 3.3e-125 452.2 323 67.2
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 7.4e-125 451.1 323 68.4
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 1.6e-124 449.9 328 65.5
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.8e-124 449.1 338 65.4
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 1.1e-123 447.2 338 65.4
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 3.1e-123 445.7 323 63.2
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 9.1e-123 444.1 306 70.6
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.6e-122 442.6 324 67.0
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 3.4e-122 442.2 324 67.3
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 1.0e-121 440.7 379 59.1
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.2e-121 439.5 324 67.0
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 6.5e-121 438.0 392 57.1
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 3.2e-120 435.6 323 64.4
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 4.2e-120 435.3 325 65.8
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 5.5e-120 434.9 324 65.7
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 5.5e-120 434.9 323 65.3
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 7.2e-120 434.5 323 65.9
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 1.2e-119 433.7 323 65.9
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 1.2e-119 433.7 323 65.3
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 2.7e-119 432.6 323 63.5
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.3e-118 429.5 323 64.7
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 6.7e-118 427.9 323 64.7
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 8.8e-118 427.6 326 66.0
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 2.6e-117 426.0 323 63.5
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 1.7e-116 423.3 341 61.3
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 2.8e-116 422.5 323 63.2
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.8e-115 419.9 326 65.3
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 2.4e-115 419.5 323 61.6
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 2.4e-115 419.5 324 63.0
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 5.3e-115 418.3 324 63.6
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 9.1e-115 417.5 324 63.0
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 3.4e-114 415.6 323 63.2
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 4.5e-114 415.2 324 62.7
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 4.5e-114 415.2 324 62.7
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 7.7e-114 414.5 323 60.1
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 1.3e-113 413.7 323 62.5
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 2.9e-113 412.5 325 63.1
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 6.5e-113 411.4 323 63.5
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 8.5e-113 411.0 308 63.6
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 1.6e-111 406.8 323 61.0
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 2.7e-111 406.0 333 58.9
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 7.9e-111 404.4 308 63.6
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 1.0e-110 404.1 324 59.9
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 1.0e-110 404.1 326 61.0
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 5.2e-110 401.7 324 59.3
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 6.7e-110 401.4 349 55.9
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 6.7e-110 401.4 333 58.0
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.3e-109 399.1 314 62.1
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 4.4e-109 398.7 364 54.7
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 2.2e-108 396.4 368 55.4
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 6.3e-108 394.8 327 60.9
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 5.3e-107 391.7 359 54.6
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.6e-106 389.4 325 62.8
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 4.5e-106 388.7 326 59.8
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 1.1e-104 384.0 323 60.4
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 1.2e-103 380.6 326 59.2
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 3.6e-103 379.0 362 55.0
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 4.7e-103 378.6 326 58.3
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 1.8e-102 376.7 285 66.7
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.8e-102 376.7 326 60.7
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 8.8e-102 374.4 326 60.1
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 1.5e-101 373.6 323 60.7
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 6.3e-100 368.2 285 66.3
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 1.6e-98 363.6 362 54.4
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 5.9e-98 361.7 248 69.0
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 6.5e-97 358.2 326 56.4
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 1.1e-96 357.5 324 57.1
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 2.7e-95 352.8 234 70.1
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 3.6e-95 352.4 306 59.2
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 8.0e-95 351.3 346 54.3
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 1.5e-93 347.1 276 61.6
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 7.5e-93 344.7 323 51.1
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 6.3e-92 341.7 329 49.5
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 9.1e-91 337.8 267 61.8
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 1.6e-90 337.0 324 50.9
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 8.3e-84 314.7 325 54.8
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.6e-79 300.4 294 57.8
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 2.8e-79 299.7 261 60.2
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 8.0e-79 298.1 318 53.1
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 4.9e-76 288.9 308 49.4
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 1.2e-71 274.2 212 65.6
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 6.2e-71 271.9 210 64.3
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 6.8e-70 268.5 171 74.9
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 2.0e-69 266.9 288 51.4
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 2.0e-69 266.9 323 42.1
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 7.5e-69 265.0 323 44.9
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.4e-67 260.8 247 51.0
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 6.8e-62 241.9 145 82.1
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.9e-60 236.5 170 67.6
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 2.6e-53 213.4 165 63.6
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.9e-51 207.2 247 47.4
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 7.8e-50 201.8 145 67.6
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.9e-49 199.5 167 61.1
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 5.1e-49 199.1 151 62.3
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 1.5e-48 197.6 127 73.2
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 2.6e-45 186.8 163 54.6
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 2.4e-43 180.3 339 36.3
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 5.4e-43 179.1 336 36.0
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 3.6e-39 166.4 153 53.6
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 1.0e-33 148.3 121 56.2
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 3.3e-32 143.3 206 36.4
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 2.8e-31 140.2 217 34.6
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 4.8e-31 139.4 316 31.3
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 5.3e-30 136.0 119 52.9
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 9.9e-29 131.7 120 55.0
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 4.9e-28 129.4 83 73.5
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 4.0e-22 109.8 85 65.9
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 2.0e-21 107.5 96 60.4
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.6e-21 105.5 166 41.0
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 4.9e-20 102.8 110 46.4
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 7.1e-19 99.0 74 56.8
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 1.6e-18 97.8 74 56.8
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 1.6e-18 97.8 74 56.8
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.3e-17 94.0 63 66.7
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 5.1e-17 92.8 77 53.2
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 5.7e-16 89.4 61 67.2
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 1.0e-12 78.6 58 67.2
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 1.1e-11 75.1 61 60.7
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 1.6e-10 71.2 54 66.7
arahy.Tifrunner.gnm1.ann1.G80LMI Arachis hypogaea HOM05D004457 ORTHO05D082520 4.8e-07 59.7 40 67.5


User provided reference genes

Program Settings