Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 3.2e-138 495.0 230 100.0
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 3.9e-88 328.6 184 79.9
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 1.1e-87 327.0 215 73.0
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 1.1e-87 327.0 183 82.5
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 4.4e-87 325.1 180 84.4
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 5.7e-87 324.7 182 81.9
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 5.7e-87 324.7 182 82.4
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 7.4e-87 324.3 177 84.7
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 9.7e-87 323.9 182 82.4
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.3e-86 323.6 180 82.8
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 2.2e-86 322.8 171 86.0
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 2.8e-86 322.4 183 79.8
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 3.7e-86 322.0 183 82.0
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 3.7e-86 322.0 181 81.8
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 4.8e-86 321.6 179 82.1
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 6.3e-86 321.2 168 86.3
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 8.2e-86 320.9 185 80.5
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 1.1e-85 320.5 180 83.3
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 1.1e-85 320.5 182 80.2
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.8e-85 319.7 179 82.1
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.8e-85 319.7 168 86.9
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 1.8e-85 319.7 178 81.5
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 2.4e-85 319.3 181 84.0
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 4.1e-85 318.5 189 79.4
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 4.1e-85 318.5 182 80.2
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 4.1e-85 318.5 185 78.9
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 4.1e-85 318.5 180 81.7
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 4.1e-85 318.5 185 81.1
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 5.3e-85 318.2 183 78.7
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 5.3e-85 318.2 182 80.8
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 7.0e-85 317.8 194 75.8
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 7.0e-85 317.8 167 85.0
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 9.1e-85 317.4 183 78.7
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 1.2e-84 317.0 177 81.4
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 1.6e-84 316.6 178 82.0
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 1.6e-84 316.6 182 80.2
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 1.6e-84 316.6 173 85.0
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 1.6e-84 316.6 185 79.5
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.0e-84 316.2 178 80.3
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 2.6e-84 315.8 181 81.2
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 2.6e-84 315.8 176 82.4
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.6e-84 315.8 166 86.1
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 2.6e-84 315.8 176 83.0
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 3.5e-84 315.5 189 74.1
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 3.5e-84 315.5 189 74.1
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 4.5e-84 315.1 170 83.5
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 4.5e-84 315.1 174 81.6
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 4.5e-84 315.1 176 80.1
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 5.9e-84 314.7 166 85.5
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 5.9e-84 314.7 166 86.1
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 5.9e-84 314.7 164 87.2
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 5.9e-84 314.7 182 78.6
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 5.9e-84 314.7 180 80.0
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 7.7e-84 314.3 170 84.7
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 7.7e-84 314.3 167 84.4
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 7.7e-84 314.3 180 81.7
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 7.7e-84 314.3 164 86.0
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.3e-83 313.5 166 85.5
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 1.3e-83 313.5 166 84.3
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 1.7e-83 313.2 176 80.1
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 1.7e-83 313.2 180 80.0
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.7e-83 313.2 180 80.0
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 2.2e-83 312.8 182 79.1
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 2.2e-83 312.8 164 86.0
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 2.2e-83 312.8 166 85.5
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 2.2e-83 312.8 164 84.1
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 2.9e-83 312.4 177 80.2
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 3.8e-83 312.0 177 80.8
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 5.0e-83 311.6 182 78.6
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 5.0e-83 311.6 166 84.3
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 5.0e-83 311.6 168 83.3
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 5.0e-83 311.6 182 79.1
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 6.5e-83 311.2 164 85.4
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 8.5e-83 310.8 181 77.3
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 8.5e-83 310.8 182 77.5
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 8.5e-83 310.8 164 83.5
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.1e-82 310.5 168 82.1
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 1.1e-82 310.5 182 77.5
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 1.1e-82 310.5 184 76.6
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.5e-82 310.1 182 76.9
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 1.5e-82 310.1 163 85.9
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 1.9e-82 309.7 183 79.8
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 1.9e-82 309.7 164 84.8
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 2.5e-82 309.3 184 77.2
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 2.5e-82 309.3 179 81.6
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 3.2e-82 308.9 178 78.1
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.2e-82 308.9 200 72.0
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 4.2e-82 308.5 164 83.5
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 4.2e-82 308.5 164 84.8
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 1.2e-81 307.0 177 78.5
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 1.2e-81 307.0 179 78.8
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 1.6e-81 306.6 179 78.2
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 1.6e-81 306.6 169 80.5
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 1.6e-81 306.6 169 80.5
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.7e-81 305.8 182 76.9
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 2.7e-81 305.8 166 83.7
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 3.6e-81 305.4 174 79.3
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 3.6e-81 305.4 182 76.9
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 4.7e-81 305.1 185 74.6
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 6.1e-81 304.7 168 82.1
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 8.0e-81 304.3 178 78.7
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 8.0e-81 304.3 178 78.1
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 8.0e-81 304.3 178 78.1
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 8.0e-81 304.3 178 78.1
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 8.0e-81 304.3 171 79.5
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 1.4e-80 303.5 178 77.5
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.4e-80 303.5 182 76.4
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.8e-80 303.1 182 75.8
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 1.8e-80 303.1 167 79.6
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.3e-80 302.8 164 82.3
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 3.0e-80 302.4 178 77.5
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 3.0e-80 302.4 184 75.5
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 4.0e-80 302.0 184 75.0
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 5.2e-80 301.6 162 82.7
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 6.7e-80 301.2 181 75.7
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 6.7e-80 301.2 181 75.7
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 8.8e-80 300.8 168 79.2
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 1.2e-79 300.4 172 78.5
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 1.2e-79 300.4 172 78.5
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 1.5e-79 300.1 166 80.1
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 2.0e-79 299.7 166 80.1
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 2.6e-79 299.3 163 81.0
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 3.3e-79 298.9 168 80.4
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 3.3e-79 298.9 168 77.4
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 4.4e-79 298.5 161 82.0
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 4.4e-79 298.5 180 77.2
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 5.7e-79 298.1 177 74.6
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 9.7e-79 297.4 184 72.3
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 9.7e-79 297.4 163 81.6
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 1.7e-78 296.6 164 79.9
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 2.2e-78 296.2 181 72.4
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 4.8e-78 295.0 161 81.4
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 1.1e-77 293.9 176 73.9
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.4e-77 293.5 171 76.0
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 1.8e-77 293.1 167 77.8
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 3.5e-76 288.9 162 78.4
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 5.9e-76 288.1 164 77.4
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 3.8e-75 285.4 162 79.0
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 6.5e-75 284.6 180 71.7
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 6.5e-75 284.6 160 77.5
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.5e-74 283.5 168 76.8
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 2.5e-74 282.7 163 74.8
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 2.7e-73 279.3 161 78.3
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 1.7e-70 270.0 160 73.1
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 2.4e-69 266.2 160 73.8
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 1.2e-68 263.8 162 72.2
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 2.0e-68 263.1 177 68.4
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 3.3e-66 255.8 169 69.2
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 4.2e-66 255.4 162 68.5
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 4.2e-66 255.4 180 65.0
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 9.8e-63 244.2 167 64.1
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 1.7e-62 243.4 172 65.7
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 1.9e-53 213.4 184 58.2
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 3.2e-45 186.0 170 57.6
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 1.2e-44 184.1 100 85.0
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 2.5e-42 176.4 161 52.2
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 2.8e-41 172.9 86 88.4
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 4.0e-40 169.1 87 83.9
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 5.4e-37 158.7 167 50.9
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 2.6e-31 139.8 107 62.6
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.0e-27 127.9 80 76.2
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 5.1e-27 125.6 143 47.6
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 6.7e-11 72.0 62 58.1


User provided reference genes

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