Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024301001 Vitis vinifera HOM05D003988 ORTHO05D004688 7.8e-73 276.9 131 100.0
GSVIVG01031025001 Vitis vinifera HOM05D003988 ORTHO05D004688 2.6e-36 155.6 79 92.4
Migut.A00873 Erythranthe guttata HOM05D003988 ORTHO05D004688 9.6e-23 110.5 79 60.8
TAR629G2028 Trochodendron aralioides HOM05D003988 ORTHO05D004688 2.8e-22 109.0 79 62.0
GSVIVG01008297001 Vitis vinifera HOM05D003988 ORTHO05D004688 4.8e-22 108.2 79 63.3
Carub.0003s1815 Capsella rubella HOM05D003988 ORTHO05D004688 8.1e-22 107.5 79 58.2
Hma1.2p1_0653F.1_g196250 Hydrangea macrophylla HOM05D003988 ORTHO05D004688 1.4e-21 106.7 79 62.0
Dinv15683 Davidia involucrata HOM05D003988 ORTHO05D004688 1.8e-21 106.3 79 63.3
MD06G1216700 Malus domestica HOM05D003988 ORTHO05D004688 1.8e-21 106.3 79 60.8
Nn3g17861 Nelumbo nucifera HOM05D003988 ORTHO05D004688 1.8e-21 106.3 79 60.8
Dinv28109 Davidia involucrata HOM05D003988 ORTHO05D004688 2.4e-21 105.9 79 62.0
AL3G31660 Arabidopsis lyrata HOM05D003988 ORTHO05D004688 3.1e-21 105.5 79 59.5
BcaB06g25881 Brassica carinata HOM05D003988 ORTHO05D004688 3.1e-21 105.5 79 59.5
BcaC05g28634 Brassica carinata HOM05D003988 ORTHO05D004688 4.0e-21 105.1 79 58.2
A05p31310 Brassica napus HOM05D003988 ORTHO05D004688 4.0e-21 105.1 79 58.2
C05p47400 Brassica napus HOM05D003988 ORTHO05D004688 4.0e-21 105.1 79 58.2
BolC5t33466H Brassica oleracea HOM05D003988 ORTHO05D004688 4.0e-21 105.1 79 58.2
BraA05t21969Z Brassica rapa HOM05D003988 ORTHO05D004688 4.0e-21 105.1 79 58.2
ClCG06G014770 Citrullus lanatus HOM05D003988 ORTHO05D004688 4.0e-21 105.1 79 58.2
Sed0007612 Sechium edule HOM05D003988 ORTHO05D004688 5.3e-21 104.8 79 58.2
Actinidia18930 Actinidia chinensis HOM05D003988 ORTHO05D004688 6.9e-21 104.4 79 59.5
CsaV3_1G003870 Cucumis sativus L. HOM05D003988 ORTHO05D004688 6.9e-21 104.4 79 58.2
Duzib068G0062 Durio zibethinus HOM05D003988 ORTHO05D004688 6.9e-21 104.4 79 58.2
Prupe.5G221900 Prunus persica HOM05D003988 ORTHO05D004688 6.9e-21 104.4 79 59.5
HPP92_000179 Vanilla planifolia HOM05D003988 ORTHO05D004688 6.9e-21 104.4 79 58.2
CSS0004736 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 9.0e-21 104.0 91 54.9
CSS0041631 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 9.0e-21 104.0 91 54.9
CSS0009918 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 1.2e-20 103.6 79 62.0
MELO3C017311.2 Cucumis melo HOM05D003988 ORTHO05D004688 1.2e-20 103.6 79 58.2
RcHm_v2.0_Chr7g0185511 Rosa chinensis HOM05D003988 ORTHO05D004688 1.2e-20 103.6 79 58.2
PGSC0003DMG400005722 Solanum tuberosum HOM05D003988 ORTHO05D004688 1.2e-20 103.6 79 57.0
AT3G18370 Arabidopsis thaliana HOM05D003988 ORTHO05D004688 1.5e-20 103.2 79 57.0
CAN.G1889.6 Capsicum annuum HOM05D003988 ORTHO05D004688 1.5e-20 103.2 79 58.2
Ciclev10018856m.g Citrus clementina HOM05D003988 ORTHO05D004688 1.5e-20 103.2 79 59.5
MD14G1227200 Malus domestica HOM05D003988 ORTHO05D004688 2.0e-20 102.8 79 59.5
CiPaw.15G131300 Carya illinoinensis HOM05D003988 ORTHO05D004688 2.6e-20 102.4 79 58.2
FvH4_5g12040 Fragaria vesca HOM05D003988 ORTHO05D004688 3.4e-20 102.1 79 57.0
FAN18G4152 Fragaria x ananassa HOM05D003988 ORTHO05D004688 3.4e-20 102.1 79 57.0
FAN18G4386 Fragaria x ananassa HOM05D003988 ORTHO05D004688 3.4e-20 102.1 79 57.0
ATR1125G120 Amborella trichopoda HOM05D003988 ORTHO05D004688 4.5e-20 101.7 79 60.8
CiPaw.16G086900 Carya illinoinensis HOM05D003988 ORTHO05D004688 4.5e-20 101.7 79 57.0
HanXRQChr08g0226051 Helianthus annuus HOM05D003988 ORTHO05D004688 4.5e-20 101.7 75 62.7
Nitab4.5_0002906g0030 Nicotiana tabacum HOM05D003988 ORTHO05D004688 4.5e-20 101.7 79 57.0
Cc04_g07060 Coffea canephora HOM05D003988 ORTHO05D004688 5.8e-20 101.3 79 58.2
SalBow1G3470 Salvia bowleyana HOM05D003988 ORTHO05D004688 5.8e-20 101.3 90 47.8
SalBow1G4660 Salvia bowleyana HOM05D003988 ORTHO05D004688 5.8e-20 101.3 90 47.8
SalBow6G4224 Salvia bowleyana HOM05D003988 ORTHO05D004688 5.8e-20 101.3 79 51.9
Sopen03g038290 Solanum pennellii HOM05D003988 ORTHO05D004688 5.8e-20 101.3 79 55.7
MSTRG.12041 Avicennia marina HOM05D003988 ORTHO05D004688 7.6e-20 100.9 79 57.0
Nn4g23862 Nelumbo nucifera HOM05D003988 ORTHO05D004688 7.6e-20 100.9 79 59.5
Thecc.03G036400 Theobroma cacao HOM05D003988 ORTHO05D004688 7.6e-20 100.9 78 57.7
MSTRG.25559 Avicennia marina HOM05D003988 ORTHO05D004688 1.0e-19 100.5 79 54.4
CARHR093720 Cardamine hirsuta HOM05D003988 ORTHO05D004688 1.0e-19 100.5 79 54.4
DCAR_023207 Daucus carota HOM05D003988 ORTHO05D004688 1.0e-19 100.5 79 60.8
Lsat_1_v5_gn_8_146920 Lactuca sativa HOM05D003988 ORTHO05D004688 1.0e-19 100.5 75 65.3
Rhsim08G0133900 Rhododendron simsii HOM05D003988 ORTHO05D004688 1.0e-19 100.5 79 58.2
Solyc03g119440.3 Solanum lycopersicum HOM05D003988 ORTHO05D004688 1.0e-19 100.5 79 55.7
SGA_v2.0_scaffold146G36202 Striga asiatica HOM05D003988 ORTHO05D004688 1.0e-19 100.5 79 53.2
COL.COLO4_32832 Corchorus olitorius HOM05D003988 ORTHO05D004688 1.3e-19 100.1 79 55.7
Thhalv10020065m.g Eutrema salsugineum HOM05D003988 ORTHO05D004688 1.3e-19 100.1 79 55.7
Sp3g16480 Schrenkiella parvula HOM05D003988 ORTHO05D004688 1.3e-19 100.1 79 55.7
Duzib205G1863 Durio zibethinus HOM05D003988 ORTHO05D004688 2.2e-19 99.4 78 56.4
Nitab4.5_0009306g0030 Nicotiana tabacum HOM05D003988 ORTHO05D004688 2.2e-19 99.4 79 54.4
FAN04G0415 Fragaria x ananassa HOM05D003988 ORTHO05D004688 2.9e-19 99.0 79 57.0
FAN08G2998 Fragaria x ananassa HOM05D003988 ORTHO05D004688 2.9e-19 99.0 79 57.0
FAN13G2567 Fragaria x ananassa HOM05D003988 ORTHO05D004688 2.9e-19 99.0 79 57.0
Sabra15G0039000 Salix brachista HOM05D003988 ORTHO05D004688 2.9e-19 99.0 79 57.0
Sed0017030 Sechium edule HOM05D003988 ORTHO05D004688 2.9e-19 99.0 90 48.9
Sc04g0003480 Simmondsia chinensis HOM05D003988 ORTHO05D004688 2.9e-19 99.0 79 55.7
vmacro17712 Vaccinium macrocarpon HOM05D003988 ORTHO05D004688 2.9e-19 99.0 79 59.5
Glyma.09G183800 Glycine max HOM05D003988 ORTHO05D004688 3.8e-19 98.6 82 56.1
Potri.015G046700 Populus trichocarpa HOM05D003988 ORTHO05D004688 3.8e-19 98.6 79 58.2
PGR044G0911 Punica granatum HOM05D003988 ORTHO05D004688 3.8e-19 98.6 82 56.1
THA.LOC104820392 Tarenaya hassleriana HOM05D003988 ORTHO05D004688 3.8e-19 98.6 79 57.0
Ca_25488_v3 Cicer arietinum L. HOM05D003988 ORTHO05D004688 4.9e-19 98.2 82 57.3
Glyma.07G092400 Glycine max HOM05D003988 ORTHO05D004688 4.9e-19 98.2 82 56.1
Manes.05G113166 Manihot esculenta HOM05D003988 ORTHO05D004688 4.9e-19 98.2 79 55.7
arahy.Tifrunner.gnm1.ann1.1BPS4M Arachis hypogaea HOM05D003988 ORTHO05D004688 6.5e-19 97.8 82 54.9
arahy.Tifrunner.gnm1.ann1.41MGIJ Arachis hypogaea HOM05D003988 ORTHO05D004688 6.5e-19 97.8 82 54.9
CANSAT80G2599 Cannabis sativa HOM05D003988 ORTHO05D004688 6.5e-19 97.8 79 58.2
TWI15G0963 Tripterygium wilfordii HOM05D003988 ORTHO05D004688 6.5e-19 97.8 79 57.0
TWI81G0944 Tripterygium wilfordii HOM05D003988 ORTHO05D004688 6.5e-19 97.8 79 55.7
Psat1g037240 Pisum sativum HOM05D003988 ORTHO05D004688 8.4e-19 97.4 82 54.9
Rhsim12G0143000 Rhododendron simsii HOM05D003988 ORTHO05D004688 8.4e-19 97.4 79 60.8
Aa31LG8G5200 Aethionema arabicum HOM05D003988 ORTHO05D004688 1.1e-18 97.1 79 54.4
Lalb_Chr22g0353111 Lupinus albus HOM05D003988 ORTHO05D004688 1.1e-18 97.1 82 54.9
Potri.012G056000 Populus trichocarpa HOM05D003988 ORTHO05D004688 1.1e-18 97.1 90 52.2
Lj2g0015725 Lotus japonicus HOM05D003988 ORTHO05D004688 1.4e-18 96.7 82 56.1
Oeu064716.1 Olea europaea HOM05D003988 ORTHO05D004688 1.4e-18 96.7 79 54.4
Psat7g010800 Pisum sativum HOM05D003988 ORTHO05D004688 1.4e-18 96.7 79 54.4
vmacro16441 Vaccinium macrocarpon HOM05D003988 ORTHO05D004688 1.4e-18 96.7 79 58.2
Aqoxy3G00281 Aquilegia oxysepala HOM05D003988 ORTHO05D004688 1.9e-18 96.3 79 54.4
MELO3C002088.2 Cucumis melo HOM05D003988 ORTHO05D004688 1.9e-18 96.3 79 53.2
Hund02386 Selenicereus undatus HOM05D003988 ORTHO05D004688 1.9e-18 96.3 79 57.0
DCAR_011356 Daucus carota HOM05D003988 ORTHO05D004688 2.5e-18 95.9 79 58.2
ECA233G4392 Erigeron canadensis HOM05D003988 ORTHO05D004688 2.5e-18 95.9 75 61.3
Eucgr.K02227 Eucalyptus grandis HOM05D003988 ORTHO05D004688 2.5e-18 95.9 79 55.7
Phvul.004G156400 Phaseolus vulgaris HOM05D003988 ORTHO05D004688 3.2e-18 95.5 82 56.1
TPR.G15165 Trifolium pratense HOM05D003988 ORTHO05D004688 3.2e-18 95.5 82 56.1
VMungo0464G1409 Vigna mungo HOM05D003988 ORTHO05D004688 3.2e-18 95.5 82 56.1
arahy.Tifrunner.gnm1.ann1.A1L0XC Arachis hypogaea HOM05D003988 ORTHO05D004688 4.2e-18 95.1 79 53.2
Cfa019762 Carpinus fangiana HOM05D003988 ORTHO05D004688 4.2e-18 95.1 79 57.0
Lalb_Chr14g0371121 Lupinus albus HOM05D003988 ORTHO05D004688 4.2e-18 95.1 82 54.9
Medtr6g084400 Medicago truncatula HOM05D003988 ORTHO05D004688 4.2e-18 95.1 82 56.1
Medtr8g104330 Medicago truncatula HOM05D003988 ORTHO05D004688 4.2e-18 95.1 79 55.7
Ca_25441_v3 Cicer arietinum L. HOM05D003988 ORTHO05D004688 5.5e-18 94.7 79 54.4
ClCG04G011120 Citrullus lanatus HOM05D003988 ORTHO05D004688 7.1e-18 94.4 79 51.9
Psat1g038080 Pisum sativum HOM05D003988 ORTHO05D004688 9.3e-18 94.0 82 54.9
CsaV3_1G006640 Cucumis sativus L. HOM05D003988 ORTHO05D004688 1.2e-17 93.6 79 51.9
QL10p025473 Quercus lobata HOM05D003988 ORTHO05D004688 1.2e-17 93.6 79 57.0
Zm00001eb125450 Zea mays HOM05D003988 ORTHO05D004688 1.2e-17 93.6 82 56.1
arahy.Tifrunner.gnm1.ann1.XMAM92 Arachis hypogaea HOM05D003988 ORTHO05D004688 1.6e-17 93.2 79 51.9
PSO017G3983 Papaver somniferum HOM05D003988 ORTHO05D004688 1.6e-17 93.2 79 54.4
SEGI_10942 Sequoiadendron giganteum HOM05D003988 ORTHO05D004688 1.6e-17 93.2 78 56.4
Haze_18685 Corylus avellana HOM05D003988 ORTHO05D004688 2.7e-17 92.4 79 55.7
PSO478G1317 Papaver somniferum HOM05D003988 ORTHO05D004688 3.5e-17 92.0 79 53.2
unitig_699.g19756 Utricularia gibba HOM05D003988 ORTHO05D004688 4.6e-17 91.7 79 53.2
Phvul.002G316700 Phaseolus vulgaris HOM05D003988 ORTHO05D004688 6.0e-17 91.3 79 54.4
AUR62025848 Chenopodium quinoa HOM05D003988 ORTHO05D004688 1.0e-16 90.5 79 54.4
Lj5C149G16 Lonicera japonica HOM05D003988 ORTHO05D004688 1.3e-16 90.1 79 57.0
Glyma.08G041800 Glycine max HOM05D003988 ORTHO05D004688 1.8e-16 89.7 75 56.0
VMungo0251G2522 Vigna mungo HOM05D003988 ORTHO05D004688 2.3e-16 89.4 79 53.2
Gohir.A12G266600 Gossypium hirsutum HOM05D003988 ORTHO05D004688 3.9e-16 88.6 79 48.1
AUR62029869 Chenopodium quinoa HOM05D003988 ORTHO05D004688 1.1e-15 87.0 79 51.9
Lalb_Chr24g0397831 Lupinus albus HOM05D003988 ORTHO05D004688 1.1e-15 87.0 79 50.6
Gorai.008G287000 Gossypium raimondii HOM05D003988 ORTHO05D004688 1.9e-15 86.3 79 46.8
Pp3c9_20840 Physcomitrium patens HOM05D003988 ORTHO05D004688 1.9e-15 86.3 79 53.2
Gohir.D12G267000 Gossypium hirsutum HOM05D003988 ORTHO05D004688 3.3e-15 85.5 79 46.8
Pp3c15_17330 Physcomitrium patens HOM05D003988 ORTHO05D004688 4.3e-15 85.1 79 48.1
EL10Ac5g11452 Beta vulgaris HOM05D003988 ORTHO05D004688 6.3e-14 81.3 67 55.2
Mapoly0126s0037 Marchantia polymorpha HOM05D003988 ORTHO05D004688 1.8e-13 79.7 79 50.6
CDE12G0686 Ceratophyllum demersum HOM05D003988 ORTHO05D004688 1.0e-11 73.9 72 51.4
SMO117G0174 Selaginella moellendorffii HOM05D003988 ORTHO05D004688 1.6e-09 66.6 72 44.4
AagrBONN_evm.TU.Sc2ySwM_344.3810 Anthoceros agrestis HOM05D003988 ORTHO05D004688 7.9e-09 64.3 79 44.3
Peaxi162Scf00015g01040 Petunia axillaris HOM05D003988 ORTHO05D004688 1.6e-06 56.6 79 39.2


User provided reference genes

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