Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 2.9e-185 651.7 333 100.0
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 2.6e-109 399.4 465 51.8
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 3.4e-109 399.1 471 51.8
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 6.5e-108 394.8 458 52.2
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 8.5e-108 394.4 463 51.0
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 1.9e-107 393.3 452 54.0
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.4e-105 387.1 457 51.4
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 5.7e-104 381.7 484 50.8
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 9.7e-104 380.9 459 49.9
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 1.3e-103 380.6 454 51.1
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 2.8e-103 379.4 445 52.6
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 3.7e-103 379.0 459 49.5
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.4e-102 377.1 459 49.2
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 2.4e-102 376.3 419 54.2
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 3.1e-102 375.9 475 48.2
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 7.0e-102 374.8 497 47.3
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 2.0e-101 373.2 429 51.7
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 5.9e-101 371.7 460 49.3
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 2.9e-100 369.4 452 50.7
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 1.4e-99 367.1 497 46.7
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 1.4e-99 367.1 501 45.7
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 3.2e-99 365.9 447 50.6
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 7.2e-99 364.8 447 50.6
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 9.4e-99 364.4 500 46.0
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.7e-98 362.8 454 49.1
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 4.7e-98 362.1 459 49.0
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 8.0e-98 361.3 447 50.6
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.8e-97 360.1 446 50.2
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 6.7e-97 358.2 503 45.9
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 8.8e-97 357.8 450 49.1
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 1.5e-96 357.1 498 46.4
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 3.3e-96 355.9 438 50.5
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 3.3e-96 355.9 454 48.5
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 1.3e-95 354.0 500 45.8
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 1.3e-95 354.0 499 44.7
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.7e-95 353.6 502 45.4
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 6.3e-95 351.7 452 47.6
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 8.2e-95 351.3 495 45.1
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 8.2e-95 351.3 453 47.9
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 1.4e-94 350.5 430 50.0
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 2.4e-94 349.7 462 47.4
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 3.1e-94 349.4 453 47.7
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 5.3e-94 348.6 495 44.6
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 9.1e-94 347.8 471 45.9
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 2.6e-93 346.3 457 48.1
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 3.5e-93 345.9 430 50.9
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 7.7e-93 344.7 485 46.6
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.0e-92 344.4 459 46.6
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 2.9e-92 342.8 448 47.1
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 1.1e-91 340.9 446 46.6
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.5e-91 340.5 451 46.6
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 2.5e-91 339.7 415 49.6
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 4.2e-91 339.0 437 46.5
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 9.4e-91 337.8 448 45.5
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 2.1e-90 336.7 430 49.3
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 2.7e-90 336.3 445 46.1
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 6.1e-90 335.1 435 46.4
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 1.0e-89 334.3 478 44.8
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 1.4e-89 334.0 429 48.7
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 1.8e-89 333.6 461 43.2
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 4.0e-89 332.4 430 48.6
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 4.0e-89 332.4 452 44.7
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 8.8e-89 331.3 429 48.7
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 2.0e-88 330.1 433 48.0
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 2.6e-88 329.7 456 44.1
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.4e-88 329.3 493 44.0
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 4.4e-88 328.9 436 48.6
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 4.4e-88 328.9 467 43.9
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 8.3e-87 324.7 457 46.0
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 1.1e-86 324.3 463 46.0
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 2.4e-86 323.2 429 47.1
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 7.0e-86 321.6 428 47.2
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 9.1e-86 321.2 448 42.9
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 5.9e-85 318.5 517 42.9
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 2.9e-84 316.2 464 44.6
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 5.0e-84 315.5 429 45.5
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 4.2e-83 312.4 433 45.0
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 7.2e-83 311.6 463 41.3
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.2e-82 310.8 427 45.7
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 2.1e-82 310.1 334 53.9
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 3.6e-82 309.3 479 40.1
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 6.1e-82 308.5 359 50.1
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 7.5e-80 301.6 368 47.8
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 1.3e-79 300.8 356 49.7
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 2.4e-78 296.6 416 44.2
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.0e-76 291.2 405 44.2
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 6.8e-73 278.5 199 68.8
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 2.0e-72 276.9 173 78.0
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 2.3e-68 263.5 390 45.4
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.5e-67 260.8 172 70.9
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 3.3e-67 259.6 373 45.3
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 9.5e-67 258.1 194 66.0
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 1.4e-65 254.2 174 70.1
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 2.9e-63 246.5 170 70.6
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 3.0e-60 236.5 392 39.8
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 9.8e-56 221.5 336 44.3
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 1.1e-54 218.0 124 86.3
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.4e-54 217.6 386 41.7
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 4.6e-53 212.6 177 57.6
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 8.9e-49 198.4 147 67.3
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 7.6e-48 195.3 124 79.0
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 2.8e-42 176.8 181 49.2
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 1.2e-37 161.4 171 47.4
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.2e-37 161.4 329 37.1
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.4e-33 147.9 171 44.4
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 2.0e-32 144.1 171 42.7
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.3e-31 141.4 422 26.1
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.6e-29 134.4 113 58.4
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 3.0e-28 130.2 94 71.3
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 8.1e-26 122.1 69 82.6
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.2e-24 118.2 279 34.8
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 2.3e-20 104.0 180 42.8
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.7e-18 96.7 197 36.0
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.2e-16 91.7 48 91.7
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 1.1e-14 85.1 55 74.5
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 3.5e-13 80.1 73 56.2
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 1.6e-10 71.2 48 68.8
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 2.8e-10 70.5 85 49.4
Cre02.g083400 Chlamydomonas reinhardtii HOM05D006388 ORTHO05D008026 4.8e-10 69.7 173 33.5
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 2.0e-08 64.3 147 35.4
Medtr6g471100 Medicago truncatula HOM05D000162 ORTHO05D000090 3.2e-06 57.0 67 50.7


User provided reference genes

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