Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.7e-120 436.4 288 100.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 2.8e-51 206.5 248 56.5
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 8.2e-51 204.9 222 53.6
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 5.3e-50 202.2 140 76.4
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 9.1e-50 201.4 224 56.7
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.0e-49 200.3 151 70.2
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.0e-48 198.0 249 53.4
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 2.2e-48 196.8 158 66.5
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 5.0e-48 195.7 158 68.4
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 8.5e-48 194.9 151 72.2
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.1e-47 194.5 226 52.2
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.1e-46 190.3 152 64.5
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 2.1e-46 190.3 152 64.5
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 2.7e-46 189.9 255 47.5
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 4.7e-46 189.1 156 64.1
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 6.1e-46 188.7 240 53.8
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 6.1e-46 188.7 142 71.1
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 6.1e-46 188.7 237 52.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.8e-45 187.2 141 70.2
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 4.0e-45 186.0 148 64.9
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 5.2e-45 185.7 141 69.5
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.2e-44 184.5 244 48.4
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.0e-44 183.7 157 63.1
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 5.7e-44 182.2 234 50.4
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 5.7e-44 182.2 163 62.0
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 9.8e-44 181.4 161 64.0
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 9.8e-44 181.4 246 50.8
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 8.3e-43 178.3 208 54.3
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 8.3e-43 178.3 279 45.9
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 8.3e-43 178.3 144 68.8
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 3.1e-42 176.4 235 53.2
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 7.0e-42 175.3 237 46.4
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.2e-41 174.5 220 51.4
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.2e-41 174.5 158 60.8
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 2.0e-41 173.7 141 66.0
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 4.5e-41 172.6 151 62.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 4.5e-41 172.6 143 62.9
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.7e-40 170.6 154 63.6
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.7e-40 170.6 154 63.6
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.7e-40 170.6 154 63.6
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 2.2e-40 170.2 139 64.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 2.2e-40 170.2 240 48.3
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 2.9e-40 169.9 140 65.0
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 5.0e-40 169.1 136 64.0
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.1e-39 167.9 123 68.3
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.5e-39 167.5 239 48.5
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.9e-39 167.2 151 60.9
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.9e-39 167.2 154 59.1
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 2.5e-39 166.8 132 65.2
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 3.2e-39 166.4 154 61.0
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 5.5e-39 165.6 237 47.3
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 5.5e-39 165.6 139 62.6
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 5.5e-39 165.6 239 46.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 7.2e-39 165.2 153 60.1
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 7.2e-39 165.2 126 68.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.2e-39 165.2 114 73.7
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.5e-39 164.9 217 47.5
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 9.5e-39 164.9 139 64.0
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.6e-38 164.1 237 45.6
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.6e-38 164.1 185 51.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.6e-38 164.1 142 63.4
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 1.6e-38 164.1 158 59.5
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.1e-38 163.7 153 61.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.1e-38 163.7 138 63.0
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 2.8e-38 163.3 157 59.2
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.6e-38 162.9 170 61.8
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 4.7e-38 162.5 104 76.9
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 4.7e-38 162.5 157 59.2
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 4.7e-38 162.5 151 58.9
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.7e-38 162.5 156 59.0
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 8.0e-38 161.8 124 65.3
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-37 161.0 237 45.1
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.4e-37 161.0 224 46.4
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.8e-37 160.6 149 60.4
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.8e-37 160.6 149 60.4
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.8e-37 160.6 159 57.9
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.8e-37 160.6 119 67.2
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.3e-37 160.2 156 59.0
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 3.0e-37 159.8 243 46.5
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 3.0e-37 159.8 138 64.5
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.2e-37 159.1 149 58.4
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 8.8e-37 158.3 233 45.9
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.5e-36 157.5 225 46.7
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 2.0e-36 157.1 209 47.8
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.9e-35 152.5 141 60.3
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 6.3e-35 152.1 116 69.0
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.4e-34 151.0 189 51.3
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.8e-34 150.6 109 71.6
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.8e-34 150.6 140 57.9
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 4.1e-34 149.4 189 50.8
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 4.1e-34 149.4 189 50.8
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.2e-33 147.9 132 61.4
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 4.5e-33 146.0 108 68.5
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.3e-32 144.4 191 49.2
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.3e-32 144.4 191 49.2
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 6.6e-32 142.1 110 66.4
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.9e-31 140.6 106 67.0
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.2e-30 137.9 178 47.8
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 1.6e-30 137.5 112 64.3
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 2.8e-30 136.7 109 65.1
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 6.1e-30 135.6 110 63.6
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.4e-29 134.4 226 42.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 5.6e-23 112.5 169 47.9
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.0e-21 108.2 140 46.4
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 2.4e-18 97.1 98 45.9
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.6e-17 94.4 93 50.5
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.0e-17 94.0 89 52.8
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.8e-17 92.0 61 68.9
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.8e-17 92.0 61 68.9
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-16 91.3 87 52.9
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.7e-16 90.9 146 39.0
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.0e-16 90.1 106 45.3
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.0e-16 90.1 59 69.5
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.1e-15 88.2 109 53.2
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.9e-15 87.4 55 76.4
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 7.3e-15 85.5 133 37.6
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 9.5e-15 85.1 53 79.2
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.7e-11 74.3 61 65.6
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 3.7e-11 73.2 49 73.5
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 6.4e-11 72.4 46 78.3
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 2.3e-08 63.9 83 42.2


User provided reference genes

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