Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024189001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.1e-105 383.6 181 100.0
GSVIVG01012273001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.2e-101 371.7 181 97.2
GSVIVG01038481001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.8e-99 365.9 181 95.6
GSVIVG01032145001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.6e-98 360.9 180 93.3
GSVIVG01001944001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.9e-96 354.0 181 92.3
GSVIVG01018225001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.5e-95 351.3 181 91.2
GSVIVG01005673001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.3e-94 349.7 181 90.6
GSVIVG01022672001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.7e-94 349.4 181 90.6
GSVIVG01025899001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.5e-94 347.4 181 90.1
GSVIVG01010182001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.1e-93 346.7 181 90.1
GSVIVG01023574001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.4e-93 346.3 181 90.1
GSVIVG01030359001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.5e-93 345.5 181 90.1
GSVIVG01003489001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.2e-93 345.1 181 89.5
GSVIVG01010705001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.2e-93 345.1 181 90.1
GSVIVG01000319001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.2e-92 343.2 181 89.0
GSVIVG01021857001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.6e-92 342.8 181 89.0
GSVIVG01037305001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.1e-92 342.4 181 89.0
GSVIVG01000313001 Vitis vinifera HOM05D008451 ORTHO05D009908 7.4e-90 334.0 172 89.0
GSVIVG01034661001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.1e-88 328.6 181 85.1
GSVIVG01030778001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.1e-80 301.6 176 81.8
GSVIVG01030850001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.6e-74 282.3 147 91.2
GSVIVG01005229001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.9e-69 266.2 180 73.3
GSVIVG01022852001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.5e-69 265.8 147 86.4
GSVIVG01022471001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.8e-67 257.3 142 85.2
GSVIVG01001707001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.7e-65 251.9 147 82.3
GSVIVG01029111001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.1e-64 248.8 181 70.7
GSVIVG01027219001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.6e-63 245.7 137 87.6
GSVIVG01032187001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.7e-60 235.0 138 78.3
GSVIVG01027926001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.3e-57 226.9 181 65.7
GSVIVG01030930001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.2e-54 216.1 107 91.6
GSVIVG01005721001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.9e-54 215.7 147 72.1
GSVIVG01022431001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.3e-49 198.0 111 86.5
GSVIVG01036620001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.1e-48 195.3 100 89.0
GSVIVG01006092001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.4e-48 194.9 100 89.0
GSVIVG01027888001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.5e-47 192.2 100 89.0
GSVIVG01014980001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.1e-44 181.4 95 89.5
GSVIVG01037283001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.0e-44 181.0 106 76.4
GSVIVG01000500001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.2e-42 177.2 93 84.9
GSVIVG01036949001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.7e-39 166.0 77 96.1
GSVIVG01034303001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.5e-39 165.2 77 97.4
GSVIVG01012550001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.9e-33 146.0 71 90.1
GSVIVG01012558001 Vitis vinifera HOM05D008451 ORTHO05D009908 9.2e-32 141.0 61 100.0
GSVIVG01035755001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.0e-31 138.3 71 84.5
GSVIVG01022959001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.3e-30 137.1 66 92.4
GSVIVG01030087001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.7e-30 136.7 80 80.0
GSVIVG01036680001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.1e-29 134.0 72 84.7
GSVIVG01018264001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.5e-29 132.9 62 93.5
GSVIVG01038032001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.1e-28 129.8 65 87.7
GSVIVG01038491001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.7e-23 112.8 81 64.2
GSVIVG01023031001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.5e-21 107.1 100 60.0
GSVIVG01026366001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.9e-21 106.7 59 81.4
QL09p039396 Quercus lobata HOM05D022192 ORTHO05D009908 4.1e-16 89.0 163 37.4
QL08p032772 Quercus lobata HOM05D022192 ORTHO05D009908 5.4e-16 88.6 162 35.2
SGA_v2.0_scaffold81G26003 Striga asiatica HOM05D017631 ORTHO05D009908 2.3e-14 83.2 150 34.0
SGA_v2.0_scaffold74G24629 Striga asiatica HOM05D017631 ORTHO05D009908 3.0e-14 82.8 150 34.0
QL10p051876 Quercus lobata HOM05D022192 ORTHO05D009908 8.6e-14 81.3 150 32.7
SGA_v2.0_scaffold142G35697 Striga asiatica HOM05D017631 ORTHO05D009908 8.6e-14 81.3 151 35.1
SGA_v2.0_scaffold540G52806 Striga asiatica HOM05D017631 ORTHO05D009908 1.5e-13 80.5 150 34.7
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 2.1e-12 76.6 152 35.5
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 8.9e-11 71.2 151 28.5
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 5.8e-10 68.6 116 33.6
Dinv09269 Davidia involucrata HOM05D008396 ORTHO05D000898 1.7e-09 67.0 154 29.9
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 2.2e-09 66.6 147 28.6
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 2.9e-09 66.2 148 28.4
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 2.9e-09 66.2 148 28.4
COL.COLO4_07542 Corchorus olitorius HOM05D030435 ORTHO05D013856 3.8e-09 65.9 127 32.3
Medtr4g007830 Medicago truncatula HOM05D011457 ORTHO05D007788 4.9e-09 65.5 155 28.4
Thecc.04G055800 Theobroma cacao HOM05D008451 ORTHO05D009908 6.4e-09 65.1 114 29.8
FAN13G0573 Fragaria x ananassa HOM05D011469 ORTHO05D014217 8.4e-09 64.7 107 32.7
FAN14G0448 Fragaria x ananassa HOM05D010142 ORTHO05D012232 8.4e-09 64.7 127 29.1
FAN18G3521 Fragaria x ananassa HOM05D011469 ORTHO05D014217 8.4e-09 64.7 107 32.7
FAN16G1984 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.4e-08 63.9 127 29.1
FAN23G0071 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.4e-08 63.9 127 29.1
FAN05G5253 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.9e-08 63.5 127 29.1
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 2.4e-08 63.2 147 32.0
CDE09G1400 Ceratophyllum demersum HOM05D002639 ORTHO05D003094 3.2e-08 62.8 119 28.6
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 3.2e-08 62.8 109 33.0
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 3.2e-08 62.8 116 31.9
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 4.2e-08 62.4 159 30.8
Potri.017G019466 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.2e-08 62.4 148 27.0
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 9.3e-08 61.2 141 30.5
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 1.2e-07 60.8 120 29.2
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 1.6e-07 60.5 144 29.9
TAR636G2312 Trochodendron aralioides HOM05D002639 ORTHO05D003094 1.6e-07 60.5 105 30.5
Ca_01932_v3 Cicer arietinum L. HOM05D002639 ORTHO05D003094 2.1e-07 60.1 106 34.0
Sed0000099 Sechium edule HOM05D002639 ORTHO05D003094 2.1e-07 60.1 116 32.8
Sc12g0009830 Simmondsia chinensis HOM05D011919 ORTHO05D014264 2.7e-07 59.7 163 22.7
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 3.5e-07 59.3 117 26.5
BcaC05g29771 Brassica carinata HOM05D002639 ORTHO05D003094 4.6e-07 58.9 127 29.1
Ciclev10031514m.g Citrus clementina HOM05D002639 ORTHO05D010823 4.6e-07 58.9 115 27.0
Psat1g154240 Pisum sativum HOM05D002639 ORTHO05D003094 4.6e-07 58.9 104 33.7
SMO115G0256 Selaginella moellendorffii HOM05D002639 ORTHO05D003094 4.6e-07 58.9 119 28.6
CSS0025382 Camellia sinensis var. sinensis HOM05D012118 ORTHO05D009908 6.0e-07 58.5 151 22.5
MBI18_g06865_MAGBIO Magnolia biondii HOM05D002639 ORTHO05D003094 6.0e-07 58.5 105 29.5
Aqoxy2G02966 Aquilegia oxysepala HOM05D002639 ORTHO05D003094 7.8e-07 58.2 104 30.8
BolC1t05578H Brassica oleracea HOM05D002639 ORTHO05D003094 7.8e-07 58.2 127 27.6
Dinv17345 Davidia involucrata HOM05D008396 ORTHO05D000898 7.8e-07 58.2 143 30.8
Thhalv10020659m.g Eutrema salsugineum HOM05D002639 ORTHO05D003094 7.8e-07 58.2 116 29.3
TWI53G0486 Tripterygium wilfordii HOM05D002639 ORTHO05D003094 7.8e-07 58.2 104 29.8
TWI73G0200 Tripterygium wilfordii HOM05D002639 ORTHO05D003094 7.8e-07 58.2 104 29.8
Actinidia40277 Actinidia chinensis HOM05D002639 ORTHO05D003094 1.0e-06 57.8 116 30.2
BcaB04g21301 Brassica carinata HOM05D002639 ORTHO05D003094 1.0e-06 57.8 116 29.3
BcaC09g47927 Brassica carinata HOM05D002639 ORTHO05D003094 1.0e-06 57.8 127 27.6
BNapus_Darmor_BZH_scaffold_117p00160 Brassica napus HOM05D002639 ORTHO05D003094 1.0e-06 57.8 116 29.3
HanXRQChr17g0538731 Helianthus annuus HOM05D002639 ORTHO05D003094 1.0e-06 57.8 102 32.4
Lalb_Chr18g0051661 Lupinus albus HOM05D002639 ORTHO05D003094 1.0e-06 57.8 104 29.8
Nn4g25817 Nelumbo nucifera HOM05D002639 ORTHO05D003094 1.0e-06 57.8 104 29.8
PSO675G4138 Papaver somniferum HOM05D002639 ORTHO05D003094 1.0e-06 57.8 104 31.7
Rhsim03G0056000 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.0e-06 57.8 110 30.0
BraA01t04407Z Brassica rapa HOM05D002639 ORTHO05D003094 1.3e-06 57.4 116 29.3
RhsimUnG0161200 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.3e-06 57.4 110 30.0
RhsimUnG0178300 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.3e-06 57.4 110 30.0
EL10Ac3g06606 Beta vulgaris HOM05D002639 ORTHO05D003094 1.7e-06 57.0 104 29.8
CANSAT25G1316 Cannabis sativa HOM05D014696 ORTHO05D010823 1.7e-06 57.0 134 29.1
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 1.7e-06 57.0 147 26.5
CDE02G3750 Ceratophyllum demersum HOM05D002639 ORTHO05D003094 1.7e-06 57.0 104 28.8
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 1.7e-06 57.0 109 30.3
FAN22G2070 Fragaria x ananassa HOM05D008674 ORTHO05D012371 1.7e-06 57.0 113 28.3
Sc13g0003440 Simmondsia chinensis HOM05D002639 ORTHO05D003094 1.7e-06 57.0 104 30.8
ClCG06G005110 Citrullus lanatus HOM05D002639 ORTHO05D003094 2.3e-06 56.6 105 32.4
MELO3C021328.2 Cucumis melo HOM05D002639 ORTHO05D003094 2.3e-06 56.6 105 32.4
MBI13_g33565_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 2.3e-06 56.6 122 26.2
PSO170G1158 Papaver somniferum HOM05D002639 ORTHO05D003094 2.3e-06 56.6 104 31.7
vmacro08160 Vaccinium macrocarpon HOM05D002639 ORTHO05D003094 2.3e-06 56.6 105 30.5
Ah.04g153570 Amaranthus hybridus HOM05D002639 ORTHO05D003094 3.0e-06 56.2 105 30.5
FvH4_6g07180 Fragaria vesca HOM05D011469 ORTHO05D014217 3.0e-06 56.2 102 32.4
PSO017G4448 Papaver somniferum HOM05D002639 ORTHO05D003094 3.0e-06 56.2 104 29.8
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 3.0e-06 56.2 110 27.3
Sed0005683 Sechium edule HOM05D002639 ORTHO05D003094 3.0e-06 56.2 105 32.4
SEGI_08688 Sequoiadendron giganteum HOM05D002639 ORTHO05D003094 3.0e-06 56.2 104 30.8
Sc12g0009840 Simmondsia chinensis HOM05D011919 ORTHO05D014264 3.0e-06 56.2 163 22.7
CsaV3_6G022290 Cucumis sativus L. HOM05D002639 ORTHO05D003094 3.9e-06 55.8 105 31.4
FAN17G1452 Fragaria x ananassa HOM05D002639 ORTHO05D003094 3.9e-06 55.8 104 32.7
Medtr2g436660 Medicago truncatula HOM05D002639 ORTHO05D003094 3.9e-06 55.8 104 32.7
Potri.008G221500 Populus trichocarpa HOM05D002639 ORTHO05D003094 3.9e-06 55.8 105 36.2
Sabra10G0008800 Salix brachista HOM05D002639 ORTHO05D003094 3.9e-06 55.8 108 27.8
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 5.1e-06 55.5 112 27.7
FvH4_6g40321 Fragaria vesca HOM05D004096 ORTHO05D010213 5.1e-06 55.5 112 27.7
FAN07G0222 Fragaria x ananassa HOM05D002639 ORTHO05D003094 5.1e-06 55.5 104 31.7
FAN12G2797 Fragaria x ananassa HOM05D002639 ORTHO05D003094 5.1e-06 55.5 104 32.7
FAN12G3880 Fragaria x ananassa HOM05D002639 ORTHO05D003094 5.1e-06 55.5 104 32.7
Lalb_Chr20g0114601 Lupinus albus HOM05D002639 ORTHO05D003094 6.6e-06 55.1 104 31.7
PSO832G1698 Papaver somniferum HOM05D002639 ORTHO05D003094 6.6e-06 55.1 133 30.1
RcHm_v2.0_Chr4g0422391 Rosa chinensis HOM05D002639 ORTHO05D003094 6.6e-06 55.1 116 28.4
Pp3c22_12640 Physcomitrium patens HOM05D002639 ORTHO05D003094 8.7e-06 54.7 109 27.5
RcHm_v2.0_Chr3g0451001 Rosa chinensis HOM05D009478 ORTHO05D010213 8.7e-06 54.7 153 26.8


User provided reference genes

Program Settings