Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.3e-143 513.1 261 100.0
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 2.4e-57 226.5 244 55.3
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.4e-52 210.7 246 48.0
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 9.8e-51 204.5 237 48.1
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 8.3e-50 201.4 234 50.0
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 3.1e-49 199.5 251 45.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 7.7e-48 194.9 230 49.1
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 2.9e-47 193.0 244 48.0
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 5.0e-47 192.2 237 46.4
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 2.5e-46 189.9 241 46.1
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 1.2e-45 187.6 238 46.2
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.6e-45 187.2 252 44.8
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.7e-45 186.4 248 45.2
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 4.7e-45 185.7 245 44.5
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 1.8e-44 183.7 239 43.1
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 2.0e-43 180.3 245 44.1
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 7.5e-43 178.3 249 44.6
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 1.3e-42 177.6 254 42.1
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.2e-42 176.8 243 42.0
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.1e-41 174.5 244 41.4
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.4e-41 174.1 240 44.6
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 1.8e-41 173.7 239 45.2
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 1.6e-40 170.6 243 40.7
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.7e-40 168.3 243 40.3
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 8.6e-39 164.9 241 42.7
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 1.9e-38 163.7 248 44.8
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 4.3e-38 162.5 274 40.5
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 6.1e-37 158.7 237 43.9
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 2.3e-36 156.8 369 32.0
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 4.0e-36 156.0 233 41.6
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 6.8e-36 155.2 249 40.2
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.2e-35 154.5 241 40.7
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 4.4e-35 152.5 251 40.2
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 1.1e-33 147.9 246 39.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 1.4e-33 147.5 236 36.0
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 1.4e-33 147.5 251 39.4
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.2e-32 144.4 194 41.8
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 1.6e-32 144.1 244 39.8
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 1.6e-32 144.1 240 39.2
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 2.0e-32 143.7 271 37.6
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.7e-32 143.3 248 41.1
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 4.6e-32 142.5 245 41.2
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 5.9e-32 142.1 244 43.4
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 7.8e-32 141.7 248 39.9
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 7.8e-32 141.7 245 39.6
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 7.8e-32 141.7 291 34.4
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 1.7e-31 140.6 225 41.3
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.7e-31 140.6 237 40.9
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 3.0e-31 139.8 254 39.4
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 5.0e-31 139.0 223 40.4
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.9e-30 137.1 236 41.5
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 3.3e-30 136.3 239 37.2
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 4.7e-29 132.5 231 39.4
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 4.7e-29 132.5 260 36.9
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 6.2e-29 132.1 330 32.1
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 6.2e-29 132.1 264 36.0
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 6.2e-29 132.1 282 35.5
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 2.3e-28 130.2 330 33.0
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 2.3e-28 130.2 250 39.2
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 1.2e-27 127.9 241 40.2
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 1.3e-26 124.4 264 36.0
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 8.3e-26 121.7 247 39.3
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 1.1e-25 121.3 231 38.1
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.9e-25 120.6 243 40.3
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 3.2e-25 119.8 241 39.0
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 6.6e-23 112.1 220 35.9
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 6.6e-23 112.1 259 36.7
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 7.3e-22 108.6 205 35.1
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 3.1e-20 103.2 236 33.9
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 1.5e-19 100.9 239 30.1
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 2.6e-19 100.1 237 34.2
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 5.8e-19 99.0 247 32.8
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 2.2e-18 97.1 226 35.8
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 2.2e-18 97.1 256 30.9
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 3.7e-18 96.3 230 38.3
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 1.9e-17 94.0 236 34.3
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 3.2e-17 93.2 221 35.7
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 4.1e-17 92.8 239 36.8
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 3.9e-15 86.3 279 28.3
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 5.6e-14 82.4 234 31.6
FAN15G0678 Fragaria x ananassa HOM05D000722 ORTHO05D000590 4.7e-13 79.3 144 36.8
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 6.8e-12 75.5 269 28.6
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 8.9e-12 75.1 268 27.6
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 1.5e-11 74.3 238 29.8
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 4.4e-11 72.8 180 32.2
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 5.8e-11 72.4 272 27.6
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 7.6e-11 72.0 253 27.3
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 7.6e-11 72.0 258 28.7
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 7.6e-11 72.0 258 28.7
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 7.6e-11 72.0 258 28.7
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 1.3e-10 71.2 265 28.7
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 2.2e-10 70.5 280 28.2
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 2.9e-10 70.1 274 27.0
BcaC01g00269 Brassica carinata HOM05D011065 ORTHO05D009410 2.4e-09 67.0 243 27.6
C03p77450 Brassica napus HOM05D011065 ORTHO05D009410 2.4e-09 67.0 243 27.6
BolC3t20000H Brassica oleracea HOM05D011065 ORTHO05D009410 2.4e-09 67.0 243 27.6
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 5.4e-09 65.9 138 33.3
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 7.1e-09 65.5 262 27.9
PSO170G1560 Papaver somniferum HOM05D000120 ORTHO05D009410 9.2e-09 65.1 141 32.6
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 4.6e-08 62.8 253 26.5
HPP92_003062 Vanilla planifolia HOM05D000120 ORTHO05D009410 5.6e-06 55.8 241 26.1
ATR0661G359 Amborella trichopoda HOM05D000120 ORTHO05D009410 7.3e-06 55.5 245 27.8
CDE04G2781 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 7.3e-06 55.5 289 25.3


User provided reference genes

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