Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01024079001 Vitis vinifera HOM05D003311 ORTHO05D003707 3.8e-72 274.6 128 100.0
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 2.0e-12 76.3 63 58.7
vmacro02251 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 9.8e-12 73.9 81 49.4
GSVIVG01024076001 Vitis vinifera HOM05D003311 ORTHO05D003707 9.8e-12 73.9 46 69.6
GSVIVG01024081001 Vitis vinifera HOM05D003311 ORTHO05D003707 3.7e-11 72.0 45 68.9
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 8.3e-11 70.9 45 68.9
HanXRQChr10g0294871 Helianthus annuus HOM05D003311 ORTHO05D003707 1.1e-10 70.5 45 68.9
Dinv04967 Davidia involucrata HOM05D003311 ORTHO05D003707 1.4e-10 70.1 45 66.7
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 1.4e-10 70.1 45 68.9
ECA234G1895 Erigeron canadensis HOM05D003311 ORTHO05D003707 1.8e-10 69.7 44 65.9
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 2.4e-10 69.3 44 68.2
Rhsim11G0187900 Rhododendron simsii HOM05D003311 ORTHO05D003707 2.4e-10 69.3 78 47.4
PGSC0003DMG400001631 Solanum tuberosum HOM05D003311 ORTHO05D003707 2.4e-10 69.3 45 66.7
Ciclev10028101m.g Citrus clementina HOM05D003311 ORTHO05D003707 3.1e-10 68.9 45 66.7
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 3.1e-10 68.9 45 66.7
ClCG02G011360 Citrullus lanatus HOM05D003311 ORTHO05D003707 5.4e-10 68.2 45 64.4
ClCG02G011540 Citrullus lanatus HOM05D003311 ORTHO05D003707 5.4e-10 68.2 45 64.4
CsaV3_2G015730 Cucumis sativus L. HOM05D003311 ORTHO05D003707 5.4e-10 68.2 45 64.4
CAN.G588.28 Capsicum annuum HOM05D003311 ORTHO05D003707 7.0e-10 67.8 45 64.4
Oeu008607.1 Olea europaea HOM05D003311 ORTHO05D003707 7.0e-10 67.8 45 64.4
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 7.0e-10 67.8 45 62.2
Sopen01g053220 Solanum pennellii HOM05D003311 ORTHO05D003707 7.0e-10 67.8 45 66.7
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 9.1e-10 67.4 63 54.0
HanXRQChr10g0289061 Helianthus annuus HOM05D003311 ORTHO05D003707 1.2e-09 67.0 45 64.4
MD05G1116400 Malus domestica HOM05D003311 ORTHO05D003707 1.2e-09 67.0 45 62.2
Manes.11G090200 Manihot esculenta HOM05D003311 ORTHO05D003707 1.2e-09 67.0 43 67.4
MELO3C020785.2 Cucumis melo HOM05D003311 ORTHO05D003707 1.6e-09 66.6 45 62.2
Atru.chr5.3229 Acer truncatum HOM05D003311 ORTHO05D003707 2.0e-09 66.2 46 67.4
HanXRQChr07g0186871 Helianthus annuus HOM05D003311 ORTHO05D003707 2.0e-09 66.2 44 65.9
Nitab4.5_0000956g0190 Nicotiana tabacum HOM05D003311 ORTHO05D003707 2.0e-09 66.2 45 64.4
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 2.0e-09 66.2 45 62.2
TAR628G0207 Trochodendron aralioides HOM05D003311 ORTHO05D003707 2.0e-09 66.2 45 62.2
Lj5A184G34 Lonicera japonica HOM05D003311 ORTHO05D003707 2.7e-09 65.9 45 62.2
RcHm_v2.0_Chr6g0245161 Rosa chinensis HOM05D003311 ORTHO05D003707 2.7e-09 65.9 45 60.0
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 3.5e-09 65.5 45 62.2
Oeu008608.1 Olea europaea HOM05D003311 ORTHO05D003707 3.5e-09 65.5 45 64.4
Oeu010053.1 Olea europaea HOM05D003311 ORTHO05D003707 3.5e-09 65.5 45 60.0
CiPaw.06G125100 Carya illinoinensis HOM05D003311 ORTHO05D003707 4.5e-09 65.1 45 62.2
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 4.5e-09 65.1 45 57.8
Sed0012527 Sechium edule HOM05D003311 ORTHO05D003707 4.5e-09 65.1 45 62.2
HanXRQChr10g0290731 Helianthus annuus HOM05D003311 ORTHO05D003707 5.9e-09 64.7 45 60.0
Lj3g0005308 Lotus japonicus HOM05D003311 ORTHO05D003707 5.9e-09 64.7 44 63.6
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 5.9e-09 64.7 45 57.8
Thecc.02G066700 Theobroma cacao HOM05D003311 ORTHO05D003707 5.9e-09 64.7 44 63.6
TWI79G0740 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 5.9e-09 64.7 46 65.2
Nitab4.5_0013889g0010 Nicotiana tabacum HOM05D003311 ORTHO05D003707 7.7e-09 64.3 45 60.0
QL09p030113 Quercus lobata HOM05D003311 ORTHO05D003707 7.7e-09 64.3 44 63.6
Atru.chr5.3230 Acer truncatum HOM05D003311 ORTHO05D003707 1.0e-08 63.9 45 55.6
Cfa005186 Carpinus fangiana HOM05D003311 ORTHO05D003707 1.0e-08 63.9 45 60.0
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 1.0e-08 63.9 45 57.8
Duzib052G0176 Durio zibethinus HOM05D003311 ORTHO05D003707 1.0e-08 63.9 44 61.4
ECA246G0279 Erigeron canadensis HOM05D003311 ORTHO05D003707 1.3e-08 63.5 44 54.5
Actinidia00597 Actinidia chinensis HOM05D003311 ORTHO05D003707 1.7e-08 63.2 45 57.8
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 1.7e-08 63.2 44 59.1
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 1.7e-08 63.2 57 52.6
Lj9A389T67 Lonicera japonica HOM05D003311 ORTHO05D003707 2.2e-08 62.8 45 57.8
vmacro17380 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 2.2e-08 62.8 46 58.7
Haze_02195 Corylus avellana HOM05D003311 ORTHO05D003707 2.9e-08 62.4 43 60.5
QL04p026366 Quercus lobata HOM05D003311 ORTHO05D003707 2.9e-08 62.4 44 61.4
CiPaw.05G077500 Carya illinoinensis HOM05D003311 ORTHO05D003707 3.8e-08 62.0 45 55.6
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 3.8e-08 62.0 45 57.8
Lsat_1_v5_gn_3_45680 Lactuca sativa HOM05D003311 ORTHO05D003707 3.8e-08 62.0 44 56.8
Peaxi162Scf00362g00962 Petunia axillaris HOM05D003311 ORTHO05D003707 3.8e-08 62.0 45 57.8
FvH4_2g01970 Fragaria vesca HOM05D003311 ORTHO05D003707 5.0e-08 61.6 45 57.8
FAN15G0502 Fragaria x ananassa HOM05D003311 ORTHO05D003707 5.0e-08 61.6 45 57.8
FAN20G1603 Fragaria x ananassa HOM05D003311 ORTHO05D003707 5.0e-08 61.6 45 57.8
FAN27G1129 Fragaria x ananassa HOM05D003311 ORTHO05D003707 5.0e-08 61.6 45 57.8
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 5.0e-08 61.6 44 59.1
TWI75G0647 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 5.0e-08 61.6 46 60.9
MBI09_g00986_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 8.5e-08 60.8 45 55.6
Peaxi162Scf00538g00520 Petunia axillaris HOM05D003311 ORTHO05D003707 1.1e-07 60.5 45 55.6
Psat7g138320 Pisum sativum HOM05D003311 ORTHO05D003707 1.1e-07 60.5 44 56.8
QL04p095545 Quercus lobata HOM05D003311 ORTHO05D003707 1.1e-07 60.5 44 59.1
Sc08g0003160 Simmondsia chinensis HOM05D003311 ORTHO05D003707 1.1e-07 60.5 44 54.5
Duzib099G0001 Durio zibethinus HOM05D003311 ORTHO05D003707 1.5e-07 60.1 44 59.1
FAN24G0785 Fragaria x ananassa HOM05D003311 ORTHO05D003707 1.5e-07 60.1 45 55.6
SGA_v2.0_scaffold32G13229 Striga asiatica HOM05D003311 ORTHO05D003707 1.5e-07 60.1 45 55.6
Ca_19004_v3 Cicer arietinum L. HOM05D003311 ORTHO05D003707 1.9e-07 59.7 44 54.5
Oeu046127.1 Olea europaea HOM05D003311 ORTHO05D003707 1.9e-07 59.7 45 57.8
Rhsim05G0063000 Rhododendron simsii HOM05D003311 ORTHO05D003707 1.9e-07 59.7 45 57.8
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 2.5e-07 59.3 45 53.3
MSTRG.20036 Avicennia marina HOM05D003311 ORTHO05D003707 2.5e-07 59.3 45 55.6
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 2.5e-07 59.3 44 54.5
Gohir.D01G156000 Gossypium hirsutum HOM05D003311 ORTHO05D003707 3.2e-07 58.9 45 57.8
Gorai.002G193500 Gossypium raimondii HOM05D003311 ORTHO05D003707 3.2e-07 58.9 45 57.8
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 3.2e-07 58.9 45 53.3
CANSAT25G1598 Cannabis sativa HOM05D003311 ORTHO05D003707 4.2e-07 58.5 45 53.3
CAN.G104.8 Capsicum annuum HOM05D003311 ORTHO05D003707 4.2e-07 58.5 43 55.8
Ciclev10029326m.g Citrus clementina HOM05D003311 ORTHO05D003707 5.5e-07 58.2 82 40.2
arahy.Tifrunner.gnm1.ann1.6SU9IG Arachis hypogaea HOM05D003311 ORTHO05D003707 7.2e-07 57.8 44 52.3
arahy.Tifrunner.gnm1.ann1.M74JA5 Arachis hypogaea HOM05D003311 ORTHO05D003707 7.2e-07 57.8 44 52.3
Eucgr.I01377 Eucalyptus grandis HOM05D003311 ORTHO05D003707 7.2e-07 57.8 45 51.1
Gorai.012G153300 Gossypium raimondii HOM05D003311 ORTHO05D003707 7.2e-07 57.8 45 55.6
TAR376G0773 Trochodendron aralioides HOM05D003311 ORTHO05D003707 7.2e-07 57.8 45 57.8
Hund06406 Selenicereus undatus HOM05D003396 ORTHO05D003646 1.2e-06 57.0 45 51.1
Sopen10g024830 Solanum pennellii HOM05D003311 ORTHO05D003707 1.2e-06 57.0 45 53.3
Gohir.A04G122900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.6e-06 56.6 45 55.6
PGSC0003DMG400004441 Solanum tuberosum HOM05D003311 ORTHO05D003707 1.6e-06 56.6 45 53.3
Gohir.A01G164100 Gossypium hirsutum HOM05D003311 ORTHO05D003707 2.1e-06 56.2 45 55.6
Gohir.D04G164900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 2.1e-06 56.2 45 53.3
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 2.1e-06 56.2 44 52.3
Solyc10g054900.2 Solanum lycopersicum HOM05D003311 ORTHO05D003707 2.1e-06 56.2 45 53.3
SGA_v2.0_scaffold58G20458 Striga asiatica HOM05D003311 ORTHO05D003707 2.1e-06 56.2 56 44.6
Ah.01g009150 Amaranthus hybridus HOM05D003396 ORTHO05D003646 2.7e-06 55.8 45 51.1
Eucgr.L01869 Eucalyptus grandis HOM05D003311 ORTHO05D003707 3.6e-06 55.5 46 45.7
MBI05_g46239_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.6e-06 55.5 45 51.1
Sopen10g024820 Solanum pennellii HOM05D003311 ORTHO05D003707 3.6e-06 55.5 45 53.3
AUR62010091 Chenopodium quinoa HOM05D003311 ORTHO05D003707 6.1e-06 54.7 44 52.3
Sopen10g024840 Solanum pennellii HOM05D003311 ORTHO05D003707 6.1e-06 54.7 45 53.3
VMungo1309G0179 Vigna mungo HOM05D003311 ORTHO05D003707 8.0e-06 54.3 44 47.7


User provided reference genes

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