Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023896001 Vitis vinifera HOM05D000151 ORTHO05D000074 7.1e-36 153.3 72 100.0
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.9e-11 70.1 57 59.6
Cc00_g28600 Coffea canephora HOM05D000151 ORTHO05D000074 2.5e-09 65.1 51 52.9
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 9.7e-09 63.2 48 60.4
Lj5P174T68 Lonicera japonica HOM05D000151 ORTHO05D000074 9.7e-09 63.2 47 57.4
Gohir.A04G132412 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.3e-08 62.8 45 60.0
Gohir.D04G169400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.3e-08 62.8 45 57.8
Gorai.012G157500 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.7e-08 62.4 45 57.8
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 1.7e-08 62.4 44 61.4
QL11p053208 Quercus lobata HOM05D000151 ORTHO05D000074 3.7e-08 61.2 46 60.9
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 4.8e-08 60.8 49 57.1
COL.COLO4_18005 Corchorus olitorius HOM05D000151 ORTHO05D000074 8.2e-08 60.1 55 43.6
Potri.009G140000 Populus trichocarpa HOM05D000151 ORTHO05D000074 8.2e-08 60.1 58 51.7
CAN.G1235.35 Capsicum annuum HOM05D000151 ORTHO05D000074 1.1e-07 59.7 48 52.1
Duzib052G1153 Durio zibethinus HOM05D000151 ORTHO05D000074 1.1e-07 59.7 44 54.5
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-07 59.3 45 60.0
Gohir.D04G169200 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.8e-07 58.9 45 57.8
Gorai.012G157200 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.8e-07 58.9 45 57.8
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 1.8e-07 58.9 54 50.0
Rhsim11G0195100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.8e-07 58.9 44 56.8
Thecc.02G052700 Theobroma cacao HOM05D000151 ORTHO05D000074 1.8e-07 58.9 44 54.5
PSO675G1630 Papaver somniferum HOM05D000151 ORTHO05D000074 2.4e-07 58.5 52 50.0
Sabra09G0108800 Salix brachista HOM05D000151 ORTHO05D000074 2.4e-07 58.5 58 53.4
MELO3C013657.2 Cucumis melo HOM05D000151 ORTHO05D000074 3.1e-07 58.2 47 48.9
Duzib132G0179 Durio zibethinus HOM05D000151 ORTHO05D000074 3.1e-07 58.2 43 53.5
RcHm_v2.0_Chr6g0279451 Rosa chinensis HOM05D000151 ORTHO05D000074 3.1e-07 58.2 45 55.6
CsaV3_6G012680 Cucumis sativus L. HOM05D000151 ORTHO05D000074 4.1e-07 57.8 47 48.9
Eucgr.I01474 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.1e-07 57.8 35 62.9
SGA_v2.0_scaffold32G13324 Striga asiatica HOM05D000151 ORTHO05D000074 4.1e-07 57.8 43 55.8
DCAR_022831 Daucus carota HOM05D000151 ORTHO05D000074 5.3e-07 57.4 42 59.5
PSO541G6252 Papaver somniferum HOM05D000151 ORTHO05D000074 5.3e-07 57.4 52 50.0
CSS0014442 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 6.9e-07 57.0 44 54.5
FvH4_2g15930 Fragaria vesca HOM05D000151 ORTHO05D000074 6.9e-07 57.0 55 47.3
ClCG00G001890 Citrullus lanatus HOM05D000151 ORTHO05D000074 9.1e-07 56.6 47 48.9
ClCG02G011070 Citrullus lanatus HOM05D000151 ORTHO05D000074 9.1e-07 56.6 47 48.9
FAN24G3248 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.1e-07 56.6 55 47.3
Ciclev10028612m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.2e-06 56.2 55 47.3
TWI31G0990 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.2e-06 56.2 66 40.9
FAN20G3023 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.5e-06 55.8 55 47.3
Sabra04G0121100 Salix brachista HOM05D000151 ORTHO05D000074 1.5e-06 55.8 35 65.7
Actinidia18026 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.0e-06 55.5 34 64.7
MSTRG.19960 Avicennia marina HOM05D000151 ORTHO05D000074 2.0e-06 55.5 47 51.1
FAN15G2361 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-06 55.5 55 49.1
Nitab4.5_0003679g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.0e-06 55.5 44 54.5
Potri.004G179685 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.0e-06 55.5 46 58.7
Sed0002173 Sechium edule HOM05D000151 ORTHO05D000074 2.0e-06 55.5 47 48.9
Migut.B00040 Erythranthe guttata HOM05D000151 ORTHO05D000074 2.6e-06 55.1 49 46.9
TWI79G0440 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.4e-06 54.7 70 38.6
Aqoxy6G01889 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.5e-06 54.3 43 55.8
HanXRQChr15g0477851 Helianthus annuus HOM05D000151 ORTHO05D000074 4.5e-06 54.3 43 53.5
Actinidia20542 Actinidia chinensis HOM05D000151 ORTHO05D000074 5.9e-06 53.9 34 64.7
SHI05785 Sapria himalayana HOM05D000151 ORTHO05D000074 7.7e-06 53.5 46 56.5


User provided reference genes

Program Settings