Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 1.5e-225 785.8 389 100.0
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 3.4e-148 528.9 340 80.3
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 5.1e-128 461.8 325 71.7
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 1.1e-127 460.7 325 68.9
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 9.2e-122 441.0 324 67.9
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 1.6e-121 440.3 326 68.7
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 4.6e-121 438.7 324 67.3
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 2.5e-119 433.0 355 62.3
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 4.7e-118 428.7 327 65.4
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 8.1e-118 427.9 325 66.5
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 5.2e-117 425.2 326 64.4
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 8.9e-117 424.5 331 65.3
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 4.4e-116 422.2 326 64.4
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 9.9e-116 421.0 326 64.7
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 1.3e-115 420.6 325 65.8
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 1.7e-115 420.2 328 65.2
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 1.7e-115 420.2 326 66.9
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 8.4e-115 417.9 335 61.5
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 1.9e-114 416.8 294 70.1
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 1.2e-113 414.1 325 64.9
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 1.6e-113 413.7 325 63.4
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 2.1e-113 413.3 327 63.9
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 3.5e-113 412.5 325 63.7
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 4.6e-113 412.1 325 63.7
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 4.6e-113 412.1 325 63.7
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 7.8e-113 411.4 325 63.7
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 3.9e-112 409.1 326 63.8
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 1.5e-111 407.1 316 67.1
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 1.9e-111 406.8 339 61.9
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 3.3e-111 406.0 328 63.7
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 2.1e-110 403.3 328 62.8
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 3.6e-110 402.5 331 62.2
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 3.6e-110 402.5 326 62.6
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 4.8e-110 402.1 325 62.2
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 6.2e-110 401.7 328 62.8
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 8.1e-110 401.4 331 62.8
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 1.4e-109 400.6 325 62.8
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 1.8e-109 400.2 329 62.3
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 2.4e-109 399.8 336 60.7
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 6.9e-109 398.3 325 62.5
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 2.0e-108 396.7 328 61.3
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 5.8e-108 395.2 327 63.3
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 1.3e-107 394.0 325 64.0
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 3.2e-106 389.4 328 62.8
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 7.1e-106 388.3 327 60.6
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 2.1e-105 386.7 290 66.2
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 2.7e-105 386.3 332 59.6
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 3.5e-105 386.0 325 63.4
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 1.0e-104 384.4 300 62.7
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 3.0e-104 382.9 330 62.7
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 1.5e-103 380.6 325 59.4
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 3.3e-103 379.4 305 62.6
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 2.8e-102 376.3 356 57.9
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 1.2e-100 370.9 327 57.5
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 1.2e-100 370.9 326 58.0
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 1.5e-100 370.5 294 65.6
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 2.6e-100 369.8 344 58.1
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 2.6e-100 369.8 304 62.8
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 9.9e-100 367.9 327 59.6
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 2.7e-97 359.8 325 56.0
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 2.3e-96 356.7 328 57.0
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 3.0e-96 356.3 332 56.0
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 6.7e-96 355.1 343 57.1
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 2.5e-95 353.2 325 56.6
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 5.6e-95 352.1 297 60.9
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 1.6e-94 350.5 330 54.8
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 3.7e-94 349.4 334 56.0
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 3.7e-94 349.4 327 56.9
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 2.4e-93 346.7 326 55.2
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 5.3e-93 345.5 330 57.6
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 5.3e-93 345.5 327 56.3
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 9.0e-93 344.7 295 61.4
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 9.0e-93 344.7 316 57.9
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.2e-92 344.4 329 57.1
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 2.6e-92 343.2 334 55.1
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 3.4e-92 342.8 323 54.8
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 2.9e-91 339.7 318 55.0
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 8.4e-91 338.2 335 53.7
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 1.4e-90 337.4 334 54.5
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 3.2e-90 336.3 335 54.0
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 9.3e-90 334.7 249 68.7
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 1.2e-89 334.3 325 52.9
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 1.2e-89 334.3 295 59.3
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 2.1e-89 333.6 294 58.5
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 3.5e-89 332.8 334 53.9
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 3.0e-88 329.7 294 60.2
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.5e-87 327.4 330 53.0
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 2.4e-85 320.1 279 59.5
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 3.1e-85 319.7 298 57.0
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.2e-84 317.8 328 53.4
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 2.0e-84 317.0 326 54.0
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 2.6e-84 316.6 222 70.3
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 2.9e-83 313.2 334 51.2
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 4.2e-82 309.3 251 62.2
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 4.2e-82 309.3 337 51.6
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 9.3e-82 308.1 337 51.9
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 1.2e-81 307.8 355 50.4
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 2.7e-81 306.6 337 51.3
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 1.8e-80 303.9 250 60.8
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 3.4e-76 289.7 324 50.0
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 1.3e-75 287.7 260 54.2
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 7.2e-74 282.0 327 50.5
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 7.2e-74 282.0 280 53.2
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 3.7e-70 269.6 352 46.0
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.5e-68 264.2 235 60.4
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.5e-68 264.2 235 60.4
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 2.0e-68 263.8 275 54.2
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 3.4e-68 263.1 327 49.5
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 2.1e-65 253.8 291 49.8
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 4.7e-65 252.7 216 59.3
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 5.1e-64 249.2 171 70.8
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.6e-63 246.9 296 45.9
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 2.2e-62 243.8 273 44.3
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 7.7e-60 235.3 229 56.3
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 1.0e-59 235.0 325 42.8
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 1.3e-59 234.6 240 49.2
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 2.2e-59 233.8 267 44.6
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 1.5e-58 231.1 277 43.3
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 2.0e-55 220.7 208 57.7
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 7.5e-55 218.8 242 50.8
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 5.5e-50 202.6 257 45.5
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 5.5e-50 202.6 177 57.1
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 8.0e-49 198.7 122 76.2
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 4.0e-48 196.4 213 53.1
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 4.8e-46 189.5 248 47.2
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 7.0e-45 185.7 150 62.0
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 2.9e-43 180.3 164 57.9
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.1e-42 178.3 276 39.5
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 5.5e-42 176.0 167 55.1
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 1.0e-40 171.8 125 68.8
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 6.3e-38 162.5 245 40.8
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 8.3e-38 162.2 159 55.3
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 1.1e-34 151.8 295 33.2
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 7.2e-34 149.1 146 52.1
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 3.0e-32 143.7 159 47.2
AUR62014216 Chenopodium quinoa HOM05D005212 ORTHO05D006353 5.2e-32 142.9 205 42.4
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 4.1e-29 133.3 154 52.6
Sabra11G0142300 Salix brachista HOM05D005212 ORTHO05D006353 2.3e-27 127.5 164 46.3
unitig_22.g5596 Utricularia gibba HOM05D005212 ORTHO05D006353 6.2e-25 119.4 91 63.7
Peaxi162Scf00376g00010 Petunia axillaris HOM05D005212 ORTHO05D006353 2.0e-20 104.4 187 35.8
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 5.2e-16 89.7 169 31.4
Aqoxy6G02632 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 7.5e-15 85.9 65 64.6
ATR0594G067 Amborella trichopoda HOM05D005212 ORTHO05D006353 9.2e-13 79.0 67 59.7
Ca_15863_v3 Cicer arietinum L. HOM05D000681 ORTHO05D011778 3.0e-11 73.9 57 59.6
PRCOL_00004527 Prasinoderma coloniale HOM05D005212 ORTHO05D006353 4.4e-07 60.1 192 28.6


User provided reference genes

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