Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 3.7e-58 228.0 118 100.0
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.5e-35 152.9 118 66.9
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-33 146.7 118 65.3
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.6e-32 142.9 118 67.8
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 6.0e-32 141.0 118 64.4
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 5.1e-31 137.9 103 68.9
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 4.3e-30 134.8 118 61.0
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 7.3e-30 134.0 108 64.8
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 1.2e-29 133.3 118 61.0
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-29 132.9 103 67.0
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 1.6e-29 132.9 118 60.2
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 2.1e-29 132.5 120 62.5
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.8e-29 132.1 121 59.5
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 4.7e-29 131.3 102 65.7
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 4.7e-29 131.3 120 65.0
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 6.2e-29 131.0 109 63.3
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 2.4e-28 129.0 118 62.7
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.4e-28 129.0 118 62.7
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 6.9e-28 127.5 125 60.0
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 2.6e-27 125.6 104 63.5
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.4e-27 124.8 89 70.8
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 4.4e-27 124.8 114 56.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 7.6e-27 124.0 116 56.0
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 9.9e-27 123.6 124 56.5
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 9.9e-27 123.6 120 56.7
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.3e-26 123.2 118 55.9
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.9e-26 122.1 120 60.8
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.8e-26 121.7 120 57.5
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 8.4e-26 120.6 118 55.1
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.9e-25 119.4 118 60.2
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 3.2e-25 118.6 106 56.6
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 4.2e-25 118.2 89 68.5
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 9.3e-25 117.1 120 56.7
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 9.3e-25 117.1 123 53.7
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 2.7e-24 115.5 102 62.7
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 4.6e-24 114.8 92 60.9
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 7.8e-24 114.0 102 61.8
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.0e-23 113.6 121 53.7
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 3.0e-23 112.1 86 67.4
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 3.9e-23 111.7 95 61.1
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 3.9e-23 111.7 95 61.1
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 3.9e-23 111.7 121 55.4
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 6.6e-23 110.9 115 59.1
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.1e-22 110.2 124 50.0
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 2.5e-22 109.0 119 52.9
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 2.5e-22 109.0 94 61.7
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 4.3e-22 108.2 94 60.6
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 4.3e-22 108.2 108 51.9
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 4.3e-22 108.2 90 58.9
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 7.3e-22 107.5 85 62.4
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 9.6e-22 107.1 97 52.6
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 1.3e-21 106.7 85 63.5
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 1.3e-21 106.7 85 63.5
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 1.3e-21 106.7 95 60.0
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.3e-21 106.7 95 58.9
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.3e-21 106.7 95 58.9
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.3e-21 106.7 108 51.9
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.3e-21 106.7 108 50.0
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.6e-21 106.3 92 57.6
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 1.6e-21 106.3 88 60.2
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.1e-21 105.9 85 65.9
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 2.8e-21 105.5 125 52.0
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 6.2e-21 104.4 82 62.2
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.1e-20 103.6 94 53.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 1.1e-20 103.6 98 52.0
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 1.4e-20 103.2 105 52.4
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 4.0e-20 101.7 92 59.8
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 9.0e-20 100.5 97 50.5
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 9.0e-20 100.5 97 50.5
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 9.0e-20 100.5 85 63.5
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.2e-19 100.1 95 57.9
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 5.8e-19 97.8 92 58.7
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 7.6e-19 97.4 108 48.1
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 7.6e-19 97.4 117 51.3
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 1.3e-18 96.7 115 50.4
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 2.2e-18 95.9 74 60.8
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 2.9e-18 95.5 88 52.3
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 3.8e-18 95.1 95 55.8
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 6.4e-18 94.4 102 52.9
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 8.4e-18 94.0 88 52.3
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 1.4e-17 93.2 86 59.3
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.9e-17 92.8 84 58.3
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.6e-16 89.7 118 46.6
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 2.1e-16 89.4 95 51.6
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 2.7e-16 89.0 144 40.3
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 3.5e-16 88.6 74 58.1
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 4.6e-16 88.2 61 70.5
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 4.6e-16 88.2 81 49.4
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 2.5e-14 82.4 57 66.7
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 4.3e-14 81.6 55 70.9
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 1.3e-13 80.1 62 62.9
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 4.0e-12 75.1 56 62.5
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.2e-09 65.5 76 53.9
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.5e-09 64.7 76 53.9
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.1e-08 62.8 76 51.3
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.1e-08 62.8 76 53.9
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 2.7e-08 62.4 79 45.6
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.6e-08 61.6 76 52.6
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 7.9e-08 60.8 59 45.8
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.0e-07 60.5 76 50.0
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 1.8e-07 59.7 83 38.6
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 8.7e-07 57.4 60 45.0
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 8.7e-07 57.4 89 44.9
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.9e-06 56.2 75 44.0
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.3e-06 55.1 75 45.3


User provided reference genes

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