Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023678001 Vitis vinifera HOM05D003560 ORTHO05D004500 2.7e-61 238.4 114 100.0
GSVIVG01023682001 Vitis vinifera HOM05D003560 ORTHO05D004500 2.4e-46 188.7 135 73.3
Cfa020786 Carpinus fangiana HOM05D003560 ORTHO05D004500 1.8e-41 172.6 136 66.2
Haze_19142 Corylus avellana HOM05D003560 ORTHO05D004500 1.8e-41 172.6 136 66.2
Nn2g14025 Nelumbo nucifera HOM05D003560 ORTHO05D004500 4.0e-41 171.4 135 66.7
CiPaw.15G164500 Carya illinoinensis HOM05D003560 ORTHO05D004500 6.8e-41 170.6 136 66.2
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 8.9e-41 170.2 135 63.7
QL02p094176 Quercus lobata HOM05D003560 ORTHO05D004500 1.5e-40 169.5 135 65.2
Lalb_Chr12g0198821 Lupinus albus HOM05D003560 ORTHO05D004500 2.0e-40 169.1 123 69.1
Eucgr.C00241 Eucalyptus grandis HOM05D003560 ORTHO05D004500 2.6e-40 168.7 136 64.0
TAR636G2626 Trochodendron aralioides HOM05D003560 ORTHO05D004500 2.6e-40 168.7 136 66.2
Dinv42820 Davidia involucrata HOM05D003560 ORTHO05D004500 3.4e-40 168.3 136 64.0
Dinv43280 Davidia involucrata HOM05D003560 ORTHO05D004500 3.4e-40 168.3 136 64.0
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 4.4e-40 167.9 135 63.7
Duzib168G0378 Durio zibethinus HOM05D003560 ORTHO05D004500 5.8e-40 167.5 136 63.2
Prupe.1G102400 Prunus persica HOM05D003560 ORTHO05D004500 5.8e-40 167.5 127 66.9
Lalb_Chr13g0300691 Lupinus albus HOM05D003560 ORTHO05D004500 7.5e-40 167.2 132 63.6
Ciclev10007284m.g Citrus clementina HOM05D003560 ORTHO05D004500 1.3e-39 166.4 137 65.0
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 1.3e-39 166.4 133 66.2
COL.COLO4_05033 Corchorus olitorius HOM05D003560 ORTHO05D004500 1.7e-39 166.0 136 64.0
Potri.006G180800 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.7e-39 166.0 136 65.4
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 1.7e-39 166.0 127 69.3
Manes.06G031700 Manihot esculenta HOM05D003560 ORTHO05D004500 2.9e-39 165.2 136 65.4
Aqoxy7G03346 Aquilegia oxysepala HOM05D003560 ORTHO05D004500 4.9e-39 164.5 134 64.2
CANSAT11G0384 Cannabis sativa HOM05D003560 ORTHO05D004500 6.4e-39 164.1 128 64.8
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 6.4e-39 164.1 126 67.5
FAN07G0247 Fragaria x ananassa HOM05D003560 ORTHO05D004500 6.4e-39 164.1 126 67.5
Thecc.09G153600 Theobroma cacao HOM05D003560 ORTHO05D004500 6.4e-39 164.1 136 64.0
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 8.3e-39 163.7 127 66.9
Potri.018G103000 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.4e-38 162.9 136 64.7
Actinidia20936 Actinidia chinensis HOM05D003560 ORTHO05D004500 1.9e-38 162.5 135 63.0
CSS0046771 Camellia sinensis var. sinensis HOM05D003560 ORTHO05D004500 1.9e-38 162.5 123 67.5
TAR625G0571 Trochodendron aralioides HOM05D003560 ORTHO05D004500 1.9e-38 162.5 137 63.5
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 2.4e-38 162.2 126 66.7
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 2.4e-38 162.2 135 61.5
Atru.chr7.14 Acer truncatum HOM05D003560 ORTHO05D004500 3.2e-38 161.8 136 64.0
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 3.2e-38 161.8 132 63.6
PSO782G3416 Papaver somniferum HOM05D003560 ORTHO05D004500 3.2e-38 161.8 138 60.9
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 3.2e-38 161.8 135 61.5
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.1e-38 161.4 126 66.7
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 4.1e-38 161.4 133 62.4
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 4.1e-38 161.4 135 61.5
PSO063G7271 Papaver somniferum HOM05D003560 ORTHO05D004500 5.4e-38 161.0 138 60.1
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 5.4e-38 161.0 131 63.4
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 7.1e-38 160.6 130 64.6
Dinv41343 Davidia involucrata HOM05D003560 ORTHO05D004500 9.2e-38 160.2 138 62.3
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 9.2e-38 160.2 130 64.6
CAN.G1190.4 Capsicum annuum HOM05D003560 ORTHO05D004500 1.2e-37 159.8 141 58.9
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.2e-37 159.8 126 65.9
TWI34G0709 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 1.6e-37 159.5 130 63.1
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 2.1e-37 159.1 132 63.6
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 2.7e-37 158.7 130 62.3
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 3.5e-37 158.3 129 62.0
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 4.6e-37 157.9 130 61.5
CsaV3_2G007690 Cucumis sativus L. HOM05D003560 ORTHO05D004500 4.6e-37 157.9 130 61.5
CiPaw.16G106900 Carya illinoinensis HOM05D003560 ORTHO05D004500 6.0e-37 157.5 136 61.8
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 1.3e-36 156.4 128 64.1
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 1.7e-36 156.0 133 62.4
DCAR_009892 Daucus carota HOM05D003560 ORTHO05D004500 3.0e-36 155.2 133 62.4
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 3.0e-36 155.2 136 60.3
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 3.0e-36 155.2 136 60.3
Phvul.003G153800 Phaseolus vulgaris HOM05D003560 ORTHO05D004500 6.6e-36 154.1 132 61.4
ECA234G2881 Erigeron canadensis HOM05D003560 ORTHO05D004500 8.6e-36 153.7 122 63.1
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 8.6e-36 153.7 121 65.3
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 8.6e-36 153.7 121 65.3
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 1.1e-35 153.3 136 60.3
TWI32G0440 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 1.5e-35 152.9 130 61.5
Glyma.02G206500 Glycine max HOM05D003560 ORTHO05D004500 1.9e-35 152.5 132 60.6
HanXRQChr10g0307611 Helianthus annuus HOM05D003560 ORTHO05D004500 1.9e-35 152.5 110 67.3
Sabra18G0088600 Salix brachista HOM05D003560 ORTHO05D004500 2.5e-35 152.1 136 61.0
MSTRG.19664 Avicennia marina HOM05D003560 ORTHO05D004500 3.3e-35 151.8 132 62.9
Lj4g0007617 Lotus japonicus HOM05D003560 ORTHO05D004500 3.3e-35 151.8 121 64.5
HanXRQChr05g0141571 Helianthus annuus HOM05D003560 ORTHO05D004500 4.3e-35 151.4 123 60.2
SalBow1G5562 Salvia bowleyana HOM05D003560 ORTHO05D004500 5.6e-35 151.0 131 61.8
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 9.5e-35 150.2 111 68.5
Migut.J01389 Erythranthe guttata HOM05D003560 ORTHO05D004500 9.5e-35 150.2 116 63.8
HanXRQChr12g0357781 Helianthus annuus HOM05D003560 ORTHO05D004500 2.8e-34 148.7 109 65.1
Carub.0007s0981 Capsella rubella HOM05D003560 ORTHO05D004500 3.6e-34 148.3 135 59.3
vmacro06053 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 3.6e-34 148.3 114 69.3
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 6.2e-34 147.5 134 59.0
unitig_37.g12751 Utricularia gibba HOM05D003560 ORTHO05D004500 6.2e-34 147.5 132 57.6
Oeu024893.2 Olea europaea HOM05D003560 ORTHO05D004500 8.1e-34 147.1 125 60.8
EL10Ac8g18909 Beta vulgaris HOM05D003560 ORTHO05D004500 1.8e-33 146.0 130 60.8
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 3.1e-33 145.2 128 57.8
AT4G30790 Arabidopsis thaliana HOM05D003560 ORTHO05D004500 4.0e-33 144.8 136 58.1
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 4.0e-33 144.8 138 53.6
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 5.2e-33 144.4 137 56.9
AUR62025371 Chenopodium quinoa HOM05D003560 ORTHO05D004500 5.2e-33 144.4 113 65.5
Sed0019076 Sechium edule HOM05D003560 ORTHO05D004500 5.2e-33 144.4 130 58.5
Rhsim03G0259200 Rhododendron simsii HOM05D003560 ORTHO05D004500 6.8e-33 144.1 118 66.9
DCAR_020090 Daucus carota HOM05D003560 ORTHO05D004500 1.2e-32 143.3 126 58.7
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 1.2e-32 143.3 126 61.9
Hund08956 Selenicereus undatus HOM05D003560 ORTHO05D004500 1.2e-32 143.3 140 56.4
Thhalv10024256m.g Eutrema salsugineum HOM05D003560 ORTHO05D004500 1.5e-32 142.9 137 56.9
PGR114G0002 Punica granatum HOM05D003560 ORTHO05D004500 2.0e-32 142.5 136 57.4
PGR142G1236 Punica granatum HOM05D003560 ORTHO05D004500 2.0e-32 142.5 136 57.4
BcaNung01560 Brassica carinata HOM05D003560 ORTHO05D004500 2.6e-32 142.1 136 58.1
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 2.6e-32 142.1 137 58.4
BcaNung02741 Brassica carinata HOM05D003560 ORTHO05D004500 3.4e-32 141.7 115 62.6
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 3.4e-32 141.7 132 57.6
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 5.8e-32 141.0 133 57.1
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 5.8e-32 141.0 133 57.1
BcaC09g51868 Brassica carinata HOM05D003560 ORTHO05D004500 7.6e-32 140.6 133 57.1
BolC1t00801H Brassica oleracea HOM05D003560 ORTHO05D004500 7.6e-32 140.6 133 57.1
C01p08140 Brassica napus HOM05D003560 ORTHO05D004500 1.7e-31 139.4 133 57.1
Ca_21152_v3 Cicer arietinum L. HOM05D003560 ORTHO05D004500 1.7e-31 139.4 125 60.0
Psat7g006640 Pisum sativum HOM05D003560 ORTHO05D004500 1.7e-31 139.4 126 57.9
A03p60310 Brassica napus HOM05D003560 ORTHO05D004500 2.2e-31 139.0 140 55.0
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 2.2e-31 139.0 115 61.7
BraA03t15073Z Brassica rapa HOM05D003560 ORTHO05D004500 2.2e-31 139.0 140 55.0
MD13G1257100 Malus domestica HOM05D003560 ORTHO05D004500 2.2e-31 139.0 125 59.2
THA.LOC104803549 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 2.2e-31 139.0 131 55.7
C03p88520 Brassica napus HOM05D003560 ORTHO05D004500 3.8e-31 138.3 132 56.8
Sp7g28660 Schrenkiella parvula HOM05D003560 ORTHO05D004500 4.9e-31 137.9 136 55.1
Lj9A721G57 Lonicera japonica HOM05D003560 ORTHO05D004500 6.4e-31 137.5 133 57.1
Medtr4g130370 Medicago truncatula HOM05D003560 ORTHO05D004500 1.1e-30 136.7 126 57.1
A08p19080 Brassica napus HOM05D003560 ORTHO05D004500 2.4e-30 135.6 132 55.3
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 2.4e-30 135.6 132 55.3
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 2.4e-30 135.6 128 58.6
Lsat_1_v5_gn_8_64740 Lactuca sativa HOM05D003560 ORTHO05D004500 2.4e-30 135.6 110 58.2
TPR.G24844 Trifolium pratense HOM05D003560 ORTHO05D004500 2.4e-30 135.6 126 56.3
Os02g0179800 Oryza sativa ssp. japonica HOM05D003560 ORTHO05D004500 7.1e-30 134.0 116 58.6
BcaC01g01140 Brassica carinata HOM05D003560 ORTHO05D004500 9.2e-30 133.7 132 55.3
BolC3t21162H Brassica oleracea HOM05D003560 ORTHO05D004500 9.2e-30 133.7 132 55.3
Aa31LG2G19610 Aethionema arabicum HOM05D003560 ORTHO05D004500 1.2e-29 133.3 142 51.4
ECA236G1776 Erigeron canadensis HOM05D003560 ORTHO05D004500 1.2e-29 133.3 119 58.8
SGA_v2.0_scaffold45G17008 Striga asiatica HOM05D003560 ORTHO05D004500 1.2e-29 133.3 124 54.8
Ah.14g084380 Amaranthus hybridus HOM05D003560 ORTHO05D004500 2.7e-29 132.1 125 56.8
THA.LOC104815517 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 4.6e-29 131.3 146 52.1
CDE02G1528 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 7.8e-29 130.6 126 57.9
Lsat_1_v5_gn_5_89080 Lactuca sativa HOM05D003560 ORTHO05D004500 1.0e-28 130.2 114 61.4
Zm00001eb206680 Zea mays HOM05D003560 ORTHO05D004500 1.0e-28 130.2 112 61.6
Ah.09g228690 Amaranthus hybridus HOM05D003560 ORTHO05D004500 1.3e-28 129.8 125 58.4
THA.LOC104803909 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.3e-28 129.8 142 51.4
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 2.5e-27 125.6 123 52.8
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 5.6e-27 124.4 114 57.9
Migut.K00302 Erythranthe guttata HOM05D003560 ORTHO05D004500 6.2e-26 120.9 118 53.4
SMO301G0012 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 8.1e-26 120.6 116 52.6
PGR102G2861 Punica granatum HOM05D003560 ORTHO05D004500 5.8e-24 114.4 120 54.2
Mapoly0041s0089 Marchantia polymorpha HOM05D003560 ORTHO05D004500 4.9e-23 111.3 111 51.4
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis HOM05D003560 ORTHO05D004500 8.4e-23 110.5 117 50.4
Zm00001eb233940 Zea mays HOM05D003560 ORTHO05D004500 8.4e-23 110.5 112 55.4
BcaC01g01128 Brassica carinata HOM05D003560 ORTHO05D004500 7.1e-22 107.5 107 52.3
Pp3c19_12090 Physcomitrium patens HOM05D003560 ORTHO05D004500 2.7e-21 105.5 127 44.1
SMO361G0185 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 6.6e-20 100.9 119 46.2
vmacro06070 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 2.5e-19 99.0 74 67.6
SMO361G0456 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 5.6e-19 97.8 119 45.4
Pp3c22_15890 Physcomitrium patens HOM05D003560 ORTHO05D004500 3.6e-18 95.1 129 43.4
Cpa.g.sc199.20 Carica papaya HOM05D003560 ORTHO05D004500 1.6e-10 69.7 40 80.0
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 6.4e-07 57.8 83 38.6


User provided reference genes

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