Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 3.2e-209 731.5 366 100.0
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.9e-140 503.1 370 70.8
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.2e-139 500.4 374 66.8
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 4.3e-137 491.9 365 69.9
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 3.4e-134 482.3 366 67.5
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 4.9e-133 478.4 360 68.6
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 8.4e-133 477.6 368 69.0
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.1e-132 477.2 367 65.4
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 9.3e-132 474.2 352 67.0
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 7.8e-131 471.1 363 67.2
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 4.8e-128 461.8 355 64.2
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 2.0e-126 456.4 369 64.0
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.7e-125 453.4 377 63.1
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.7e-125 453.4 376 61.2
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 4.9e-125 451.8 363 64.7
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 8.4e-125 451.1 360 63.9
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 4.2e-124 448.7 372 64.2
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.6e-123 446.8 376 62.8
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.6e-123 446.8 368 63.9
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.7e-123 446.0 382 59.9
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 5.6e-121 438.3 370 62.4
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.6e-120 435.6 387 58.7
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.4e-119 433.7 370 61.4
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 9.0e-119 431.0 364 60.7
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 5.8e-118 428.3 363 60.1
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 7.6e-118 427.9 370 61.1
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 1.7e-117 426.8 367 59.9
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 6.4e-117 424.9 361 62.6
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 2.4e-116 422.9 461 52.3
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 4.2e-116 422.2 365 59.5
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 1.6e-115 420.2 362 60.2
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 2.1e-115 419.9 365 59.7
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 3.5e-115 419.1 366 60.7
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.0e-114 417.5 366 59.6
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 3.0e-114 416.0 374 58.6
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 6.7e-114 414.8 394 56.1
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.5e-113 412.9 339 64.0
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.5e-113 412.9 362 56.6
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 7.4e-113 411.4 376 56.6
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 6.2e-112 408.3 411 54.3
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.4e-111 407.1 410 55.4
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.2e-110 404.1 365 58.6
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 3.4e-110 402.5 368 60.1
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 4.5e-110 402.1 399 56.9
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 1.9e-108 396.7 331 60.7
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 7.1e-108 394.8 364 58.0
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.2e-107 394.0 349 60.7
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 2.1e-107 393.3 385 55.3
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.5e-105 387.1 434 51.4
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 2.1e-104 383.3 394 53.3
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 3.7e-104 382.5 367 52.6
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 3.7e-104 382.5 367 52.6
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 6.3e-104 381.7 366 56.3
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.8e-103 380.2 362 55.5
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 2.6e-102 376.3 374 51.6
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 5.9e-102 375.2 364 53.0
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 5.0e-101 372.1 364 53.3
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 6.5e-101 371.7 339 57.2
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 8.5e-101 371.3 390 52.1
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 1.9e-100 370.2 358 53.6
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.9e-100 370.2 289 65.7
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 5.5e-100 368.6 365 52.1
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 1.3e-98 364.0 363 51.0
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 3.9e-98 362.5 356 53.1
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 9.7e-97 357.8 358 54.2
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.3e-96 357.5 395 48.6
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 4.8e-96 355.5 318 56.9
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 5.9e-94 348.6 416 47.8
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.0e-93 347.8 399 49.6
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 3.8e-93 345.9 319 57.1
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 5.5e-92 342.0 355 50.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 7.2e-92 341.7 355 49.9
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.6e-91 340.5 383 49.6
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.7e-91 339.7 389 47.8
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 7.9e-91 338.2 380 48.2
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 6.7e-90 335.1 367 48.5
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 2.6e-89 333.2 350 51.7
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 3.3e-89 332.8 371 48.8
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 5.7e-89 332.0 326 54.6
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 1.3e-88 330.9 453 43.9
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 6.9e-87 325.1 381 48.6
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 2.0e-86 323.6 348 53.7
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 1.3e-85 320.9 280 58.9
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 5.5e-84 315.5 432 42.4
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 1.5e-81 307.4 321 51.7
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 3.3e-81 306.2 363 49.3
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 5.9e-78 295.4 301 53.8
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 5.9e-78 295.4 301 53.8
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 7.2e-76 288.5 375 46.4
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 7.2e-68 261.9 174 71.3
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 6.1e-67 258.8 365 42.5
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 8.0e-67 258.5 360 42.5
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.6e-65 253.4 418 39.7
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 3.5e-62 243.0 281 48.8
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.0e-58 231.5 176 62.5
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 5.9e-54 215.7 378 39.4
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 3.6e-51 206.5 160 60.0
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 9.2e-47 191.8 146 61.6
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 8.6e-45 185.3 277 43.0
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 4.0e-42 176.4 163 59.5
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.2e-41 174.9 178 55.6
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.3e-34 150.6 119 66.4
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.1e-26 125.2 83 71.1
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.1e-26 125.2 83 71.1
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 2.6e-25 120.6 156 44.9
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.7e-24 117.9 155 44.5
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 6.4e-24 115.9 326 29.4
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 1.4e-23 114.8 113 56.6
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 6.6e-21 105.9 135 50.4
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 6.9e-10 69.3 61 59.0
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 1.2e-09 68.6 124 37.9
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 2.6e-09 67.4 200 22.5


User provided reference genes

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