Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 1.2e-124 449.9 231 100.0
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 8.2e-94 347.4 231 75.8
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 9.1e-93 344.0 231 74.9
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 4.2e-90 335.1 232 73.7
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 2.6e-87 325.9 232 72.4
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 4.8e-86 321.6 231 70.6
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 6.3e-86 321.2 231 69.3
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 5.4e-85 318.2 227 69.6
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 7.0e-85 317.8 231 69.7
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 1.2e-84 317.0 231 68.4
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 1.6e-84 316.6 231 69.7
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.7e-84 315.8 231 69.7
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 3.5e-84 315.5 231 70.6
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.7e-83 313.2 233 67.8
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.9e-83 312.4 231 68.0
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.9e-83 312.4 231 68.0
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 5.0e-83 311.6 233 69.1
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 5.0e-83 311.6 231 66.7
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 6.5e-83 311.2 232 69.0
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.5e-82 310.1 231 68.4
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 1.9e-82 309.7 231 67.5
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 1.9e-82 309.7 227 70.5
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 2.5e-82 309.3 226 70.4
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 5.5e-82 308.1 231 68.0
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 9.5e-82 307.4 231 67.5
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 2.8e-81 305.8 232 67.2
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 2.3e-80 302.8 233 67.8
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 3.0e-80 302.4 231 65.8
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 3.0e-80 302.4 231 68.4
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 4.0e-80 302.0 231 66.2
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 2.0e-79 299.7 233 66.5
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 2.0e-79 299.7 233 67.4
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 3.4e-79 298.9 231 66.2
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 9.8e-79 297.4 233 67.0
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 2.2e-78 296.2 231 68.0
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 2.8e-78 295.8 224 66.5
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 2.8e-78 295.8 231 64.1
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.4e-77 293.5 231 68.0
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.8e-77 293.1 224 67.4
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 4.1e-77 292.0 224 65.6
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.2e-76 290.4 233 65.2
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 3.5e-76 288.9 231 64.1
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 7.8e-76 287.7 231 62.8
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 7.8e-76 287.7 231 64.1
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 3.8e-75 285.4 231 62.3
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 8.6e-75 284.3 231 63.6
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 1.5e-74 283.5 232 63.8
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.5e-74 283.5 231 63.2
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 1.9e-74 283.1 231 63.6
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 3.3e-74 282.3 231 61.9
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 3.3e-74 282.3 231 62.3
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 3.6e-73 278.9 231 61.5
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 6.1e-73 278.1 231 59.7
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 8.0e-73 277.7 224 66.5
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 1.4e-72 276.9 237 61.6
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 1.8e-72 276.6 231 63.2
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.8e-72 276.6 231 60.2
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 2.3e-72 276.2 231 62.3
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 2.3e-72 276.2 224 65.6
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 6.8e-72 274.6 231 62.3
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 6.8e-72 274.6 231 61.0
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.2e-71 273.9 224 65.2
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.0e-71 273.1 281 55.5
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 3.4e-71 272.3 231 61.5
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 4.4e-71 271.9 231 62.8
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 4.4e-71 271.9 231 58.9
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 5.8e-71 271.6 231 61.0
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 1.3e-70 270.4 224 61.6
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 1.7e-70 270.0 231 58.4
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.9e-70 268.5 231 61.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 1.9e-69 266.5 230 58.3
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 3.2e-69 265.8 212 64.6
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.2e-68 263.8 224 61.2
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 3.5e-68 262.3 231 60.2
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 3.5e-68 262.3 234 59.4
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 7.8e-68 261.2 225 61.3
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 3.9e-67 258.8 235 59.1
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 5.0e-67 258.5 226 63.3
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.5e-66 256.9 231 60.6
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 3.3e-66 255.8 234 56.4
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 9.5e-66 254.2 243 57.6
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 4.7e-65 251.9 217 61.8
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.8e-64 250.0 227 59.0
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 5.2e-64 248.4 238 58.4
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 1.3e-62 243.8 253 55.3
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 3.7e-62 242.3 224 57.6
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 1.4e-61 240.4 165 73.9
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 2.4e-61 239.6 236 55.9
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.4e-61 239.6 231 54.1
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 9.2e-61 237.7 231 55.0
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 2.7e-60 236.1 231 54.1
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 2.3e-59 233.0 237 54.0
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 4.3e-58 228.8 257 51.8
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 4.3e-58 228.8 212 57.1
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 1.8e-56 223.4 224 55.4
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.2e-56 221.9 206 58.7
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 1.5e-55 220.3 244 51.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.4e-55 218.8 166 70.5
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 1.4e-53 213.8 237 48.9
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 2.4e-53 213.0 224 53.1
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.2e-53 212.6 232 54.3
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 4.1e-53 212.2 232 49.1
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 7.1e-53 211.5 238 51.3
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 2.7e-52 209.5 231 51.5
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 3.5e-52 209.1 236 49.2
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.6e-49 200.3 220 47.3
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 3.1e-48 196.1 159 62.9
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 9.2e-45 184.5 162 59.9
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 6.0e-44 181.8 219 47.9
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 9.6e-34 147.9 108 68.5
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-31 140.6 260 35.0
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 5.8e-31 138.7 147 57.8
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 7.1e-29 131.7 95 69.5
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 1.6e-28 130.6 224 35.3
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 3.5e-28 129.4 100 61.0
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.5e-28 129.4 194 42.8
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 1.3e-27 127.5 92 67.4
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.7e-27 125.2 140 52.1
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 4.0e-24 115.9 274 30.3
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 3.4e-23 112.8 198 38.9
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 1.8e-19 100.5 89 56.2
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.3e-19 100.1 74 68.9
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 5.1e-19 99.0 89 53.9
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 8.7e-19 98.2 168 39.9
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 8.7e-19 98.2 168 39.9
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 1.5e-18 97.4 89 53.9
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 1.3e-17 94.4 77 67.5
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 1.6e-17 94.0 89 52.8
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 2.1e-17 93.6 63 69.8
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 5.3e-16 89.0 92 58.7
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.2e-15 87.8 66 68.2
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 1.0e-14 84.7 54 77.8
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.5e-13 80.1 77 49.4


User provided reference genes

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