Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 6.8e-87 324.3 210 100.0
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.2e-28 129.4 236 39.0
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 4.6e-27 125.6 234 38.0
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 4.6e-27 125.6 234 37.6
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 4.6e-27 125.6 234 37.6
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 1.0e-26 124.4 242 37.6
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.8e-26 123.6 216 39.8
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 5.1e-26 122.1 236 38.1
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 6.7e-26 121.7 202 62.9
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 1.5e-25 120.6 204 42.6
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 2.5e-25 119.8 206 42.2
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 3.3e-25 119.4 234 34.2
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.6e-24 117.1 262 37.4
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 2.2e-24 116.7 216 55.6
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 2.8e-24 116.3 224 36.6
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 3.7e-24 115.9 237 41.4
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.4e-23 114.0 245 37.1
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 5.3e-23 112.1 218 37.6
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 1.5e-22 110.5 230 38.7
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.0e-22 110.2 255 34.1
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 2.0e-22 110.2 260 38.1
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 2.0e-22 110.2 231 41.6
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 4.5e-22 109.0 223 38.6
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 5.9e-22 108.6 235 43.0
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 5.9e-22 108.6 224 36.2
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 5.9e-22 108.6 233 36.1
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 1.0e-21 107.8 248 34.3
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.8e-21 105.9 248 35.1
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 3.8e-21 105.9 263 33.8
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 6.5e-21 105.1 223 37.7
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 1.4e-20 104.0 219 35.6
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 1.4e-20 104.0 253 43.5
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 5.5e-20 102.1 226 35.4
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 5.5e-20 102.1 246 34.1
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.2e-19 100.9 201 43.8
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.6e-19 100.5 261 35.2
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 2.7e-19 99.8 264 36.7
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 3.6e-19 99.4 248 49.2
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 4.6e-19 99.0 226 35.0
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 1.0e-18 97.8 210 39.0
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 1.8e-18 97.1 218 36.7
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 1.8e-18 97.1 235 42.1
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 2.3e-18 96.7 239 33.9
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 2.3e-18 96.7 111 50.5
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 3.0e-18 96.3 109 52.3
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 3.9e-18 95.9 227 37.4
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 8.8e-18 94.7 191 38.2
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.1e-17 94.4 222 38.7
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.1e-17 94.4 256 32.0
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 1.5e-17 94.0 215 34.9
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 1.5e-17 94.0 213 40.4
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 2.0e-17 93.6 234 36.8
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 2.5e-17 93.2 232 39.2
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 3.7e-16 89.4 225 35.1
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 4.8e-16 89.0 226 41.6
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 4.8e-16 89.0 236 36.0
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 1.8e-15 87.0 230 35.7
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 1.8e-15 87.0 238 38.7
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 4.1e-15 85.9 95 52.6
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 9.1e-15 84.7 207 52.2
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 2.0e-14 83.6 123 44.7
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 4.5e-14 82.4 232 34.5
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 1.7e-13 80.5 218 35.8
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 2.2e-13 80.1 208 34.1
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 2.2e-13 80.1 143 39.9
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 3.8e-13 79.3 109 47.7
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.8e-13 79.3 109 47.7
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 5.0e-13 79.0 256 30.5
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 8.5e-13 78.2 106 49.1
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 1.1e-12 77.8 190 52.6
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 1.1e-12 77.8 229 42.8
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 3.2e-12 76.3 108 47.2
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 3.2e-12 76.3 230 31.3
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 5.1e-10 68.9 61 59.0
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 6.7e-10 68.6 105 43.8
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 4.4e-09 65.9 48 66.7
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 5.7e-09 65.5 258 31.0
HanXRQChr14g0430361 Helianthus annuus HOM05D002661 ORTHO05D002786 7.4e-09 65.1 178 30.3
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 9.7e-09 64.7 197 29.4
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 1.3e-08 64.3 137 36.5
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 4.8e-08 62.4 229 27.9
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 6.3e-08 62.0 259 29.3
Actinidia28594 Actinidia chinensis HOM05D002661 ORTHO05D002786 1.1e-07 61.2 179 29.1
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.1e-07 61.2 214 34.1
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.1e-07 61.2 192 28.6
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 1.4e-07 60.8 188 28.7
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 1.4e-07 60.8 192 32.8
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 1.8e-07 60.5 102 44.1
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 1.8e-07 60.5 197 30.5
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 2.4e-07 60.1 192 30.2
vmacro21919 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 2.4e-07 60.1 195 29.2
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 4.1e-07 59.3 97 39.2
Sp2g05500 Schrenkiella parvula HOM05D012662 ORTHO05D008751 4.1e-07 59.3 100 44.0
Sopen04g035000 Solanum pennellii HOM05D002661 ORTHO05D002786 4.1e-07 59.3 94 37.2
BraA09t37484Z Brassica rapa HOM05D012662 ORTHO05D008751 5.3e-07 58.9 102 43.1
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 5.3e-07 58.9 194 28.4
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 5.3e-07 58.9 189 28.6
Solyc04g081390.4 Solanum lycopersicum HOM05D002661 ORTHO05D002786 5.3e-07 58.9 94 37.2
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 7.0e-07 58.5 90 37.8
PGSC0003DMG400009934 Solanum tuberosum HOM05D002661 ORTHO05D002786 7.0e-07 58.5 94 37.2
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 7.0e-07 58.5 189 27.0
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 9.1e-07 58.2 205 29.3
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 9.1e-07 58.2 185 28.1
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 1.5e-06 57.4 190 30.0
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 1.5e-06 57.4 190 30.5
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 2.0e-06 57.0 193 29.0
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 2.0e-06 57.0 196 28.6
Peaxi162Scf00034g02717 Petunia axillaris HOM05D002661 ORTHO05D002786 2.0e-06 57.0 94 36.2
RcHm_v2.0_Chr6g0302771 Rosa chinensis HOM05D002661 ORTHO05D002786 2.0e-06 57.0 90 40.0
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 2.6e-06 56.6 197 25.4
THA.LOC104821326 Tarenaya hassleriana HOM05D002661 ORTHO05D002786 3.5e-06 56.2 93 39.8
EL10Ac6g15477 Beta vulgaris HOM05D002661 ORTHO05D002786 4.5e-06 55.8 99 36.4
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 4.5e-06 55.8 188 27.7
Sopen02g028700 Solanum pennellii HOM05D002661 ORTHO05D002786 5.9e-06 55.5 199 25.6
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 7.7e-06 55.1 192 26.6
Dinv31838 Davidia involucrata HOM05D002661 ORTHO05D002786 7.7e-06 55.1 195 26.7
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 7.7e-06 55.1 194 28.4
FvH4_2g38540 Fragaria vesca HOM05D002661 ORTHO05D002786 7.7e-06 55.1 90 38.9
FAN15G3636 Fragaria x ananassa HOM05D002661 ORTHO05D002786 7.7e-06 55.1 90 38.9
FAN27G2774 Fragaria x ananassa HOM05D002661 ORTHO05D002786 7.7e-06 55.1 90 38.9
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 7.7e-06 55.1 67 52.2
TWI56G0437 Tripterygium wilfordii HOM05D002661 ORTHO05D002786 7.7e-06 55.1 93 38.7
HPP92_022114 Vanilla planifolia HOM05D002661 ORTHO05D002786 7.7e-06 55.1 109 35.8


User provided reference genes

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